RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 KRTAP9-2Q9BYQ4 174 aa9.13□□□□□ -0.95
SMN2-202ENST00000380742 ANAPC13Q9BS18 74 aa9.12□□□□□ -0.95
SMN2-202ENST00000380742 LORP23490 312 aaPredicted RBP9.11□□□□□ -0.95
SMN2-202ENST00000380742 KRTAP9-6A0A140TA67 174 aa9.1□□□□□ -0.95
SMN2-202ENST00000380742 S4R3F8 94 aa9.08□□□□□ -0.96
SMN2-202ENST00000380742 A8MUN3 132 aa9.07□□□□□ -0.96
SMN2-202ENST00000380742 LCA10Q71F78 164 aa9.05□□□□□ -0.96
SMN2-202ENST00000380742 DMAC1Q96GE9 116 aa9.03□□□□□ -0.96
SMN2-202ENST00000380742 KRTAP9-8Q9BYQ0 159 aa8.99□□□□□ -0.97
SMN2-202ENST00000380742 CYSTM1Q9H1C7 97 aa8.99□□□□□ -0.97
SMN2-202ENST00000380742 SPANXA2-OT1Q8N9U9 137 aa8.96□□□□□ -0.98
SMN2-202ENST00000380742 CCDC179H3BU77 68 aa8.95□□□□□ -0.98
SMN2-202ENST00000380742 CSAG1Q6PB30 78 aa8.93□□□□□ -0.98
SMN2-202ENST00000380742 H7BZZ5 65 aa8.91□□□□□ -0.98
SMN2-202ENST00000380742 NDUFC1O43677 76 aa8.91□□□□□ -0.98
SMN2-202ENST00000380742 MT2AP02795 61 aa8.91□□□□□ -0.98
SMN2-202ENST00000380742 ACYP2P14621 99 aa8.89□□□□□ -0.99
SMN2-202ENST00000380742 MT1FP04733 61 aa8.85□□□□□ -0.99
SMN2-202ENST00000380742 RPS28P62857 69 aaKnown RBP8.83□□□□□ -1
SMN2-202ENST00000380742 KRTAP10-10P60014 251 aa8.8□□□□□ -1
SMN2-202ENST00000380742 LCE3BQ5TA77 95 aa8.79□□□□□ -1
SMN2-202ENST00000380742 CHKB-CPT1BH3BT56 60 aa8.73□□□□□ -1.01
SMN2-202ENST00000380742 KRTAP4-8A0A0G2JLE6 195 aa8.71□□□□□ -1.02
SMN2-202ENST00000380742 COA5Q86WW8 74 aa8.69□□□□□ -1.02
SMN2-202ENST00000380742 KRTAP9-3Q9BYQ3 159 aa8.68□□□□□ -1.02
SMN2-202ENST00000380742 H0YAA0 97 aa8.67□□□□□ -1.02
SMN2-202ENST00000380742 KRTAP9-9Q9BYP9 154 aa8.67□□□□□ -1.02
SMN2-202ENST00000380742 KRTAP9-4Q9BYQ2 154 aa8.67□□□□□ -1.02
SMN2-202ENST00000380742 SPTSSBQ8NFR3 76 aa8.65□□□□□ -1.02
SMN2-202ENST00000380742 TMEM258P61165 79 aa8.62□□□□□ -1.03
SMN2-202ENST00000380742 ADM2Q7Z4H4 148 aa8.61□□□□□ -1.03
SMN2-202ENST00000380742 ATP5EP56381 51 aaPredicted RBP8.61□□□□□ -1.03
SMN2-202ENST00000380742 KRTAP4-12Q9BQ66 201 aa8.52□□□□□ -1.05
SMN2-202ENST00000380742 P0C880 135 aa8.51□□□□□ -1.05
SMN2-202ENST00000380742 KRTAP19-1Q8IUB9 90 aa8.49□□□□□ -1.05
SMN2-202ENST00000380742 USH2AO75445 5202 aa8.49□□□□□ -1.05
SMN2-202ENST00000380742 CRIPTQ9P021 101 aa8.48□□□□□ -1.05
SMN2-202ENST00000380742 SPRR2GQ9BYE4 73 aa8.46□□□□□ -1.06
SMN2-202ENST00000380742 KRTAP4-7Q9BYR0 210 aa8.46□□□□□ -1.06
SMN2-202ENST00000380742 PRO0628Q9UI54 55 aa8.45□□□□□ -1.06
SMN2-202ENST00000380742 H3BS24 57 aa8.44□□□□□ -1.06
SMN2-202ENST00000380742 FSIP2Q5CZC0 6907 aa8.43□□□□□ -1.06
SMN2-202ENST00000380742 SERP1Q9Y6X1 66 aa8.35□□□□□ -1.07
SMN2-202ENST00000380742 R4GN34 69 aa8.33□□□□□ -1.08
SMN2-202ENST00000380742 KRTAP19-8Q3LI54 63 aa8.32□□□□□ -1.08
SMN2-202ENST00000380742 M0QZ58 72 aa8.3□□□□□ -1.08
SMN2-202ENST00000380742 SSPOA2VEC9 5147 aa8.3□□□□□ -1.08
SMN2-202ENST00000380742 SMIM26A0A096LP01 95 aa8.29□□□□□ -1.08
SMN2-202ENST00000380742 SEC61GP60059 68 aa8.29□□□□□ -1.08
SMN2-202ENST00000380742 CRCT1Q9UGL9 99 aa8.28□□□□□ -1.08
SMN2-202ENST00000380742 MT1BP07438 61 aa8.27□□□□□ -1.09
SMN2-202ENST00000380742 Q5VV11 94 aa8.24□□□□□ -1.09
SMN2-202ENST00000380742 V9GYY9 64 aa8.24□□□□□ -1.09
SMN2-202ENST00000380742 A0A1B0GU69 56 aa8.22□□□□□ -1.09
SMN2-202ENST00000380742 LCE1DQ5T752 114 aa8.2□□□□□ -1.1
SMN2-202ENST00000380742 LINC01558Q9Y6Z2 57 aa8.19□□□□□ -1.1
SMN2-202ENST00000380742 KRTAP13-4Q3LI77 160 aa8.18□□□□□ -1.1
SMN2-202ENST00000380742 LINC01554Q52M75 96 aa8.15□□□□□ -1.1
SMN2-202ENST00000380742 A0A1B0GU33 70 aa8.14□□□□□ -1.11
SMN2-202ENST00000380742 KRTAP19-6Q3LI70 58 aa8.12□□□□□ -1.11
SMN2-202ENST00000380742 KRTAP4-2Q9BYR5 136 aa8.12□□□□□ -1.11
SMN2-202ENST00000380742 PRR15LQ9BU68 103 aa8.1□□□□□ -1.11
SMN2-202ENST00000380742 KRTAP4-9Q9BYQ8 210 aa8.07□□□□□ -1.12
SMN2-202ENST00000380742 SPATA8Q6RVD6 105 aa8.06□□□□□ -1.12
SMN2-202ENST00000380742 PLAC4Q8WY50 150 aa8.03□□□□□ -1.12
SMN2-202ENST00000380742 FCGBPQ9Y6R7 5405 aaPredicted RBP8.02□□□□□ -1.13
SMN2-202ENST00000380742 Q1T7F1 81 aa8.01□□□□□ -1.13
SMN2-202ENST00000380742 BRK1Q8WUW1 75 aa7.98□□□□□ -1.13
SMN2-202ENST00000380742 A6NN06 94 aa7.97□□□□□ -1.13
SMN2-202ENST00000380742 A0A0D9SG42 100 aa7.95□□□□□ -1.14
SMN2-202ENST00000380742 KRTAP10-5P60370 271 aa7.95□□□□□ -1.14
SMN2-202ENST00000380742 PMAIP1Q13794 54 aa7.95□□□□□ -1.14
SMN2-202ENST00000380742 PSPHP1O15172 72 aa7.92□□□□□ -1.14
SMN2-202ENST00000380742 A8MU10 97 aa7.88□□□□□ -1.15
SMN2-202ENST00000380742 MT1XP80297 61 aa7.88□□□□□ -1.15
SMN2-202ENST00000380742 KRTAP5-3Q6L8H2 238 aa7.87□□□□□ -1.15
SMN2-202ENST00000380742 UQCR11O14957 56 aa7.86□□□□□ -1.15
SMN2-202ENST00000380742 KRTAP12-1P59990 96 aa7.83□□□□□ -1.16
SMN2-202ENST00000380742 PRO2289Q9P1D8 64 aa7.81□□□□□ -1.16
SMN2-202ENST00000380742 SPINT4Q6UDR6 99 aa7.8□□□□□ -1.16
SMN2-202ENST00000380742 KRTAP12-2P59991 146 aa7.78□□□□□ -1.16
SMN2-202ENST00000380742 MIR22HGQ0VDD5 57 aa7.74□□□□□ -1.17
SMN2-202ENST00000380742 CAMK2N1Q7Z7J9 78 aa7.73□□□□□ -1.17
SMN2-202ENST00000380742 KTN1-AS1Q86SY8 53 aa7.68□□□□□ -1.18
SMN2-202ENST00000380742 A6NED7 52 aa7.66□□□□□ -1.18
SMN2-202ENST00000380742 MACF1Q9UPN3 7388 aaKnown RBP7.66□□□□□ -1.18
SMN2-202ENST00000380742 KRTAP4-11Q9BYQ6 195 aa7.65□□□□□ -1.18
SMN2-202ENST00000380742 KRTAP10-7P60409 375 aaPredicted RBP7.53□□□□□ -1.2
SMN2-202ENST00000380742 SYNE2Q8WXH0 6885 aaKnown RBP7.51□□□□□ -1.21
SMN2-202ENST00000380742 KRTAP10-12P60413 245 aa7.47□□□□□ -1.21
SMN2-202ENST00000380742 KMT2DO14686 5537 aa7.47□□□□□ -1.21
SMN2-202ENST00000380742 K7ERS5 55 aa7.45□□□□□ -1.22
SMN2-202ENST00000380742 C10orf95Q9H7T3 257 aa7.45□□□□□ -1.22
SMN2-202ENST00000380742 CDC42SE1Q9NRR8 79 aa7.45□□□□□ -1.22
SMN2-202ENST00000380742 KRTAP9-7A8MTY7 169 aa7.44□□□□□ -1.22
SMN2-202ENST00000380742 KRTAP6-3Q3LI67 103 aa7.36□□□□□ -1.23
SMN2-202ENST00000380742 KRTAP8-1Q8IUC2 63 aa7.3□□□□□ -1.24
SMN2-202ENST00000380742 TNP1P09430 55 aa7.27□□□□□ -1.25
SMN2-202ENST00000380742 KRTAP5-9P26371 169 aa7.25□□□□□ -1.25
SMN2-202ENST00000380742 SPRR2FQ96RM1 72 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms