RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 RBM12B-AS1Q9P1G2 102 aa9.98□□□□□ -0.81
PDLIM5-205ENST00000380180 LCA10Q71F78 164 aa9.97□□□□□ -0.81
PDLIM5-205ENST00000380180 PRO0628Q9UI54 55 aa9.97□□□□□ -0.81
PDLIM5-205ENST00000380180 H1FX-AS1Q4G0G2 97 aa9.97□□□□□ -0.81
PDLIM5-205ENST00000380180 KRTAP3-3Q9BYR6 98 aa9.96□□□□□ -0.81
PDLIM5-205ENST00000380180 S4R3F8 94 aa9.95□□□□□ -0.82
PDLIM5-205ENST00000380180 SEC61GP60059 68 aa9.94□□□□□ -0.82
PDLIM5-205ENST00000380180 A8MU10 97 aa9.93□□□□□ -0.82
PDLIM5-205ENST00000380180 KRTAP4-1Q9BYQ7 146 aa9.92□□□□□ -0.82
PDLIM5-205ENST00000380180 HERC1Q15751 4861 aa9.87□□□□□ -0.83
PDLIM5-205ENST00000380180 MUC17Q685J3 4493 aa9.86□□□□□ -0.83
PDLIM5-205ENST00000380180 CDC42SE1Q9NRR8 79 aa9.85□□□□□ -0.83
PDLIM5-205ENST00000380180 UQCR11O14957 56 aa9.82□□□□□ -0.84
PDLIM5-205ENST00000380180 LCE2DQ5TA82 110 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-205ENST00000380180 HMCN2Q8NDA2 5059 aa9.74□□□□□ -0.85
PDLIM5-205ENST00000380180 SPATA8Q6RVD6 105 aa9.74□□□□□ -0.85
PDLIM5-205ENST00000380180 MIR22HGQ0VDD5 57 aa9.73□□□□□ -0.85
PDLIM5-205ENST00000380180 A0A1B0GU33 70 aa9.71□□□□□ -0.86
PDLIM5-205ENST00000380180 CSAG1Q6PB30 78 aa9.7□□□□□ -0.86
PDLIM5-205ENST00000380180 KRTAP10-6P60371 365 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-205ENST00000380180 KRTAP19-2Q3LHN2 52 aa9.67□□□□□ -0.86
PDLIM5-205ENST00000380180 SVIPQ8NHG7 77 aa9.67□□□□□ -0.86
PDLIM5-205ENST00000380180 KRTAP3-2Q9BYR7 98 aa9.66□□□□□ -0.86
PDLIM5-205ENST00000380180 MUC2Q02817 5179 aa9.63□□□□□ -0.87
PDLIM5-205ENST00000380180 H0YAA0 97 aa9.61□□□□□ -0.87
PDLIM5-205ENST00000380180 P0C880 135 aa9.57□□□□□ -0.88
PDLIM5-205ENST00000380180 ADM2Q7Z4H4 148 aa9.57□□□□□ -0.88
PDLIM5-205ENST00000380180 PMAIP1Q13794 54 aa9.56□□□□□ -0.88
PDLIM5-205ENST00000380180 KRTAP13-4Q3LI77 160 aa9.46□□□□□ -0.89
PDLIM5-205ENST00000380180 A6NN06 94 aa9.46□□□□□ -0.9
PDLIM5-205ENST00000380180 FLGP20930 4061 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-205ENST00000380180 LCE2CQ5TA81 110 aa9.35□□□□□ -0.91
PDLIM5-205ENST00000380180 UBR4Q5T4S7 5183 aa9.34□□□□□ -0.91
PDLIM5-205ENST00000380180 A0A0D9SG42 100 aa9.31□□□□□ -0.92
PDLIM5-205ENST00000380180 RNF213Q63HN8 5207 aa9.29□□□□□ -0.92
PDLIM5-205ENST00000380180 M0QZ58 72 aa9.28□□□□□ -0.92
PDLIM5-205ENST00000380180 LORP23490 312 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-205ENST00000380180 K7ERS5 55 aa9.21□□□□□ -0.94
PDLIM5-205ENST00000380180 KTN1-AS1Q86SY8 53 aa9.2□□□□□ -0.94
PDLIM5-205ENST00000380180 R4GN34 69 aa9.2□□□□□ -0.94
PDLIM5-205ENST00000380180 FAT4Q6V0I7 4981 aa9.18□□□□□ -0.94
PDLIM5-205ENST00000380180 MT1HP80294 61 aa9.13□□□□□ -0.95
PDLIM5-205ENST00000380180 KRTAP12-2P59991 146 aa9.1□□□□□ -0.95
PDLIM5-205ENST00000380180 KRTAP12-1P59990 96 aa9.09□□□□□ -0.95
PDLIM5-205ENST00000380180 M0R2T5 61 aa9.09□□□□□ -0.95
PDLIM5-205ENST00000380180 LINC01554Q52M75 96 aa9.09□□□□□ -0.95
PDLIM5-205ENST00000380180 SPINT4Q6UDR6 99 aa9.06□□□□□ -0.96
PDLIM5-205ENST00000380180 PRAC1Q96KF2 57 aa8.96□□□□□ -0.98
PDLIM5-205ENST00000380180 CRIPTQ9P021 101 aa8.96□□□□□ -0.98
PDLIM5-205ENST00000380180 ROMO1P60602 79 aa8.9□□□□□ -0.99
PDLIM5-205ENST00000380180 KRTAP9-8Q9BYQ0 159 aa8.85□□□□□ -0.99
PDLIM5-205ENST00000380180 MT2AP02795 61 aa8.83□□□□□ -1
PDLIM5-205ENST00000380180 MT1FP04733 61 aa8.8□□□□□ -1
PDLIM5-205ENST00000380180 KRTAP10-10P60014 251 aa8.78□□□□□ -1
PDLIM5-205ENST00000380180 SPRR2GQ9BYE4 73 aa8.76□□□□□ -1.01
PDLIM5-205ENST00000380180 KRTAP19-1Q8IUB9 90 aa8.75□□□□□ -1.01
PDLIM5-205ENST00000380180 KRTAP25-1Q3LHN0 102 aa8.64□□□□□ -1.03
PDLIM5-205ENST00000380180 CAMK2N1Q7Z7J9 78 aa8.64□□□□□ -1.03
PDLIM5-205ENST00000380180 C10orf95Q9H7T3 257 aa8.6□□□□□ -1.03
PDLIM5-205ENST00000380180 LCE2AQ5TA79 106 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-205ENST00000380180 PLAC4Q8WY50 150 aa8.53□□□□□ -1.04
PDLIM5-205ENST00000380180 KRTAP9-3Q9BYQ3 159 aa8.51□□□□□ -1.05
PDLIM5-205ENST00000380180 KRTAP19-8Q3LI54 63 aa8.48□□□□□ -1.05
PDLIM5-205ENST00000380180 MT1BP07438 61 aa8.38□□□□□ -1.07
PDLIM5-205ENST00000380180 LCE2BO14633 110 aa8.25□□□□□ -1.09
PDLIM5-205ENST00000380180 TNP1P09430 55 aa8.25□□□□□ -1.09
PDLIM5-205ENST00000380180 KRTAP10-5P60370 271 aa8.17□□□□□ -1.1
PDLIM5-205ENST00000380180 MT1XP80297 61 aa8.17□□□□□ -1.1
PDLIM5-205ENST00000380180 PP632Q6XCG6 107 aa8.11□□□□□ -1.11
PDLIM5-205ENST00000380180 KRTAP23-1A1A580 65 aa8.03□□□□□ -1.12
PDLIM5-205ENST00000380180 KRTAP9-2Q9BYQ4 174 aa8.01□□□□□ -1.13
PDLIM5-205ENST00000380180 PRO2289Q9P1D8 64 aa8□□□□□ -1.13
PDLIM5-205ENST00000380180 USH2AO75445 5202 aa7.96□□□□□ -1.14
PDLIM5-205ENST00000380180 LCE3AQ5TA76 89 aa7.89□□□□□ -1.15
PDLIM5-205ENST00000380180 KRTAP10-7P60409 375 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-205ENST00000380180 KRTAP10-12P60413 245 aa7.81□□□□□ -1.16
PDLIM5-205ENST00000380180 KRTAP15-1Q3LI76 137 aa7.73□□□□□ -1.17
PDLIM5-205ENST00000380180 KRTAP8-1Q8IUC2 63 aa7.71□□□□□ -1.17
PDLIM5-205ENST00000380180 FSIP2Q5CZC0 6907 aa7.69□□□□□ -1.18
PDLIM5-205ENST00000380180 SSPOA2VEC9 5147 aa7.66□□□□□ -1.18
PDLIM5-205ENST00000380180 KRTAP19-6Q3LI70 58 aa7.63□□□□□ -1.19
PDLIM5-205ENST00000380180 CRCT1Q9UGL9 99 aa7.62□□□□□ -1.19
PDLIM5-205ENST00000380180 KRTAP9-6A0A140TA67 174 aa7.62□□□□□ -1.19
PDLIM5-205ENST00000380180 KRTAP12-3P60328 96 aa7.56□□□□□ -1.2
PDLIM5-205ENST00000380180 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
PDLIM5-205ENST00000380180 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
PDLIM5-205ENST00000380180 KMT2DO14686 5537 aa7.51□□□□□ -1.21
PDLIM5-205ENST00000380180 KRTAP19-5Q3LI72 72 aa7.45□□□□□ -1.22
PDLIM5-205ENST00000380180 SPRR5A0A1B0GTR4 108 aa7.32□□□□□ -1.24
PDLIM5-205ENST00000380180 KRTAP19-7Q3SYF9 63 aa7.29□□□□□ -1.24
PDLIM5-205ENST00000380180 FCGBPQ9Y6R7 5405 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-205ENST00000380180 NDUFAF8A1L188 74 aa7.25□□□□□ -1.25
PDLIM5-205ENST00000380180 LUZP6Q538Z0 58 aa7.18□□□□□ -1.26
PDLIM5-205ENST00000380180 MT1EP04732 61 aa7.12□□□□□ -1.27
PDLIM5-205ENST00000380180 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-205ENST00000380180 LCE3CQ5T5A8 94 aa7.08□□□□□ -1.28
PDLIM5-205ENST00000380180 MT1LQ93083 61 aa7.03□□□□□ -1.28
PDLIM5-205ENST00000380180 MACF1Q9UPN3 7388 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-205ENST00000380180 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
PDLIM5-205ENST00000380180 KRTAP4-7Q9BYR0 210 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms