RNA–Protein interactions for RNA: ENST00000379933.7

RREB1-203, Transcript of ras responsive element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene RREB1, Length 5,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RREB1-203ENST00000379933 BSNQ9UPA5 3926 aa7.76□□□□□ -1.17
RREB1-203ENST00000379933 MUC3AQ02505 3323 aa7.74□□□□□ -1.17
RREB1-203ENST00000379933 DNAH1Q9P2D7 4330 aa7.73□□□□□ -1.17
RREB1-203ENST00000379933 MT2AP02795 61 aa7.69□□□□□ -1.18
RREB1-203ENST00000379933 SPRR2FQ96RM1 72 aa7.68□□□□□ -1.18
RREB1-203ENST00000379933 KRTAP4-1Q9BYQ7 146 aa7.67□□□□□ -1.18
RREB1-203ENST00000379933 KRTAP10-7P60409 375 aaPredicted RBP7.63□□□□□ -1.19
RREB1-203ENST00000379933 DNAH11Q96DT5 4516 aa7.58□□□□□ -1.2
RREB1-203ENST00000379933 DNAH9Q9NYC9 4486 aa7.58□□□□□ -1.2
RREB1-203ENST00000379933 CUBNO60494 3623 aa7.55□□□□□ -1.2
RREB1-203ENST00000379933 DNAH5Q8TE73 4624 aa7.54□□□□□ -1.2
RREB1-203ENST00000379933 DNAH10Q8IVF4 4471 aa7.53□□□□□ -1.2
RREB1-203ENST00000379933 DNAH2Q9P225 4427 aa7.52□□□□□ -1.21
RREB1-203ENST00000379933 SPRR2GQ9BYE4 73 aa7.5□□□□□ -1.21
RREB1-203ENST00000379933 VPS13CQ709C8 3753 aa7.46□□□□□ -1.21
RREB1-203ENST00000379933 MT1FP04733 61 aa7.46□□□□□ -1.22
RREB1-203ENST00000379933 PLECQ15149 4684 aaKnown RBP7.43□□□□□ -1.22
RREB1-203ENST00000379933 SPRR2EP22531 72 aa7.38□□□□□ -1.23
RREB1-203ENST00000379933 SPRR2BP35325 72 aa7.38□□□□□ -1.23
RREB1-203ENST00000379933 SPRR2AP35326 72 aa7.38□□□□□ -1.23
RREB1-203ENST00000379933 AKAP9Q99996 3911 aa7.33□□□□□ -1.24
RREB1-203ENST00000379933 KRTAP19-5Q3LI72 72 aa7.26□□□□□ -1.25
RREB1-203ENST00000379933 KRTAP19-4Q3LI73 84 aa7.23□□□□□ -1.25
RREB1-203ENST00000379933 DYNC1H1Q14204 4646 aaKnown RBP7.21□□□□□ -1.25
RREB1-203ENST00000379933 SPRR2DP22532 72 aa7.18□□□□□ -1.26
RREB1-203ENST00000379933 DNAH17Q9UFH2 4485 aa7.13□□□□□ -1.27
RREB1-203ENST00000379933 FAT2Q9NYQ8 4349 aa7.11□□□□□ -1.27
RREB1-203ENST00000379933 VPS13DQ5THJ4 4388 aa7.11□□□□□ -1.27
RREB1-203ENST00000379933 CSMD3Q7Z407 3707 aa7.11□□□□□ -1.27
RREB1-203ENST00000379933 ZNF469Q96JG9 3925 aaPredicted RBP7.1□□□□□ -1.27
RREB1-203ENST00000379933 DNHD1Q96M86 4753 aa7.1□□□□□ -1.27
RREB1-203ENST00000379933 LCE3CQ5T5A8 94 aa7.07□□□□□ -1.28
RREB1-203ENST00000379933 LCE2BO14633 110 aa7.03□□□□□ -1.28
RREB1-203ENST00000379933 LRP1BQ9NZR2 4599 aa7.02□□□□□ -1.29
RREB1-203ENST00000379933 DNAH3Q8TD57 4116 aa7.01□□□□□ -1.29
RREB1-203ENST00000379933 RYR1P21817 5038 aa6.98□□□□□ -1.29
RREB1-203ENST00000379933 KRTAP19-8Q3LI54 63 aa6.98□□□□□ -1.29
RREB1-203ENST00000379933 DYNC2H1Q8NCM8 4307 aaKnown RBP6.98□□□□□ -1.29
RREB1-203ENST00000379933 HERC1Q15751 4861 aa6.95□□□□□ -1.3
RREB1-203ENST00000379933 SACSQ9NZJ4 4579 aa6.93□□□□□ -1.3
RREB1-203ENST00000379933 KRTAP12-4P60329 112 aa6.91□□□□□ -1.3
RREB1-203ENST00000379933 FAT1Q14517 4588 aa6.91□□□□□ -1.3
RREB1-203ENST00000379933 KRTAP17-1Q9BYP8 105 aa6.85□□□□□ -1.31
RREB1-203ENST00000379933 STARD9Q9P2P6 4700 aa6.85□□□□□ -1.31
RREB1-203ENST00000379933 KRTAP19-1Q8IUB9 90 aa6.83□□□□□ -1.32
RREB1-203ENST00000379933 RYR3Q15413 4870 aa6.83□□□□□ -1.32
RREB1-203ENST00000379933 DNAH8Q96JB1 4490 aa6.79□□□□□ -1.32
RREB1-203ENST00000379933 DNAH6Q9C0G6 4158 aa6.75□□□□□ -1.33
RREB1-203ENST00000379933 LRP1Q07954 4544 aaKnown RBP6.73□□□□□ -1.33
RREB1-203ENST00000379933 FAT3Q8TDW7 4589 aa6.72□□□□□ -1.33
RREB1-203ENST00000379933 MT1GP13640 62 aa6.69□□□□□ -1.34
RREB1-203ENST00000379933 MT1XP80297 61 aa6.69□□□□□ -1.34
RREB1-203ENST00000379933 KRTAP9-8Q9BYQ0 159 aa6.69□□□□□ -1.34
RREB1-203ENST00000379933 ANK2Q01484 3957 aa6.68□□□□□ -1.34
RREB1-203ENST00000379933 LCE3BQ5TA77 95 aa6.67□□□□□ -1.34
RREB1-203ENST00000379933 APOBP04114 4563 aaKnown RBP6.66□□□□□ -1.34
RREB1-203ENST00000379933 MT1BP07438 61 aa6.65□□□□□ -1.34
RREB1-203ENST00000379933 HSPG2P98160 4391 aa6.61□□□□□ -1.35
RREB1-203ENST00000379933 KRTAP9-3Q9BYQ3 159 aa6.61□□□□□ -1.35
RREB1-203ENST00000379933 LCE2CQ5TA81 110 aa6.61□□□□□ -1.35
RREB1-203ENST00000379933 PRKDCP78527 4128 aaKnown RBP6.6□□□□□ -1.35
RREB1-203ENST00000379933 DNAH7Q8WXX0 4024 aa6.59□□□□□ -1.35
RREB1-203ENST00000379933 BIRC6Q9NR09 4857 aa6.59□□□□□ -1.35
RREB1-203ENST00000379933 RYR2Q92736 4967 aa6.56□□□□□ -1.36
RREB1-203ENST00000379933 KMT2AQ03164 3969 aa6.55□□□□□ -1.36
RREB1-203ENST00000379933 VPS13BQ7Z7G8 4022 aa6.55□□□□□ -1.36
RREB1-203ENST00000379933 LCE2DQ5TA82 110 aaPredicted RBP6.54□□□□□ -1.36
RREB1-203ENST00000379933 KRTAP9-2Q9BYQ4 174 aa6.52□□□□□ -1.36
RREB1-203ENST00000379933 PKHD1L1Q86WI1 4243 aa6.51□□□□□ -1.37
RREB1-203ENST00000379933 CMYA5Q8N3K9 4069 aa6.47□□□□□ -1.37
RREB1-203ENST00000379933 MYCBP2O75592 4640 aa6.45□□□□□ -1.38
RREB1-203ENST00000379933 KRTAP4-8A0A0G2JLE6 195 aa6.45□□□□□ -1.38
RREB1-203ENST00000379933 KRTAP4-8Q9BYQ9 185 aa6.45□□□□□ -1.38
RREB1-203ENST00000379933 HERC2O95714 4834 aa6.42□□□□□ -1.38
RREB1-203ENST00000379933 KRTAP19-3Q7Z4W3 81 aa6.4□□□□□ -1.38
RREB1-203ENST00000379933 KRTAP9-6A0A140TA67 174 aa6.38□□□□□ -1.39
RREB1-203ENST00000379933 FRAS1Q86XX4 4008 aa6.34□□□□□ -1.39
RREB1-203ENST00000379933 PKD1P98161 4303 aa6.31□□□□□ -1.4
RREB1-203ENST00000379933 LYSTQ99698 3801 aa6.3□□□□□ -1.4
RREB1-203ENST00000379933 KIAA1109Q2LD37 5005 aa6.29□□□□□ -1.4
RREB1-203ENST00000379933 HECTD4Q9Y4D8 3996 aa6.28□□□□□ -1.4
RREB1-203ENST00000379933 LCE3DQ9BYE3 92 aa6.27□□□□□ -1.41
RREB1-203ENST00000379933 MT4P47944 62 aa6.24□□□□□ -1.41
RREB1-203ENST00000379933 KRTAP19-6Q3LI70 58 aa6.23□□□□□ -1.41
RREB1-203ENST00000379933 PCLOQ9Y6V0 5065 aa6.2□□□□□ -1.42
RREB1-203ENST00000379933 LCE3EQ5T5B0 92 aa6.14□□□□□ -1.43
RREB1-203ENST00000379933 MT1LQ93083 61 aa6.14□□□□□ -1.43
RREB1-203ENST00000379933 MT1EP04732 61 aa6.13□□□□□ -1.43
RREB1-203ENST00000379933 KRTAP20-1Q3LI63 56 aa6.12□□□□□ -1.43
RREB1-203ENST00000379933 MT3P25713 68 aa6.08□□□□□ -1.44
RREB1-203ENST00000379933 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
RREB1-203ENST00000379933 MT1MQ8N339 61 aa6□□□□□ -1.45
RREB1-203ENST00000379933 KRTAP19-2Q3LHN2 52 aa6□□□□□ -1.45
RREB1-203ENST00000379933 KRTAP9-7A8MTY7 169 aa5.95□□□□□ -1.46
RREB1-203ENST00000379933 HYDINQ4G0P3 5121 aa5.92□□□□□ -1.46
RREB1-203ENST00000379933 LRP2P98164 4655 aa5.91□□□□□ -1.46
RREB1-203ENST00000379933 KRTAP4-7Q9BYR0 210 aa5.9□□□□□ -1.47
RREB1-203ENST00000379933 EPPK1P58107 5090 aaKnown RBP5.89□□□□□ -1.47
RREB1-203ENST00000379933 LCE2AQ5TA79 106 aaPredicted RBP5.88□□□□□ -1.47
RREB1-203ENST00000379933 MUC17Q685J3 4493 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms