RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 FAT3Q8TDW7 4589 aa7.6□□□□□ -1.19
SNCAIP-203ENST00000379538 LINC00304Q8N9R0 145 aa7.57□□□□□ -1.2
SNCAIP-203ENST00000379538 A8MUU9 505 aa7.56□□□□□ -1.2
SNCAIP-203ENST00000379538 HERC2O95714 4834 aa7.54□□□□□ -1.2
SNCAIP-203ENST00000379538 BIRC6Q9NR09 4857 aa7.53□□□□□ -1.2
SNCAIP-203ENST00000379538 KRTAP25-1Q3LHN0 102 aa7.51□□□□□ -1.21
SNCAIP-203ENST00000379538 KRTAP3-1Q9BYR8 98 aa7.48□□□□□ -1.21
SNCAIP-203ENST00000379538 A0A1B0GU33 70 aa7.47□□□□□ -1.21
SNCAIP-203ENST00000379538 C9orf92A6NGG3 77 aa7.47□□□□□ -1.21
SNCAIP-203ENST00000379538 PCLOQ9Y6V0 5065 aa7.46□□□□□ -1.22
SNCAIP-203ENST00000379538 ROMO1P60602 79 aa7.45□□□□□ -1.22
SNCAIP-203ENST00000379538 KRTAP10-8P60410 259 aa7.42□□□□□ -1.22
SNCAIP-203ENST00000379538 MT1HL1P0DM35 61 aa7.4□□□□□ -1.22
SNCAIP-203ENST00000379538 H1FX-AS1Q4G0G2 97 aa7.4□□□□□ -1.22
SNCAIP-203ENST00000379538 LPAP08519 4548 aa7.39□□□□□ -1.23
SNCAIP-203ENST00000379538 RPS29P62273 56 aaKnown RBP7.36□□□□□ -1.23
SNCAIP-203ENST00000379538 HERC1Q15751 4861 aa7.35□□□□□ -1.23
SNCAIP-203ENST00000379538 P0C880 135 aa7.34□□□□□ -1.23
SNCAIP-203ENST00000379538 COX6B2Q6YFQ2 88 aa7.32□□□□□ -1.24
SNCAIP-203ENST00000379538 LRP2P98164 4655 aa7.3□□□□□ -1.24
SNCAIP-203ENST00000379538 A0A0D9SG42 100 aa7.26□□□□□ -1.25
SNCAIP-203ENST00000379538 KRTAP13-4Q3LI77 160 aa7.22□□□□□ -1.25
SNCAIP-203ENST00000379538 C10orf95Q9H7T3 257 aa7.22□□□□□ -1.25
SNCAIP-203ENST00000379538 K7ERS5 55 aa7.21□□□□□ -1.26
SNCAIP-203ENST00000379538 C20orf166-AS1Q96NR2 134 aa7.21□□□□□ -1.26
SNCAIP-203ENST00000379538 TPRXLQ17RH7 258 aa7.2□□□□□ -1.26
SNCAIP-203ENST00000379538 J3QL48 77 aa7.18□□□□□ -1.26
SNCAIP-203ENST00000379538 MUC2Q02817 5179 aa7.15□□□□□ -1.26
SNCAIP-203ENST00000379538 KRTAP10-6P60371 365 aaPredicted RBP7.14□□□□□ -1.27
SNCAIP-203ENST00000379538 SPINT4Q6UDR6 99 aa7.14□□□□□ -1.27
SNCAIP-203ENST00000379538 RPL37P61927 97 aaKnown RBP7.12□□□□□ -1.27
SNCAIP-203ENST00000379538 KRTAP3-3Q9BYR6 98 aa7.1□□□□□ -1.27
SNCAIP-203ENST00000379538 XP32Q5T750 250 aa7.08□□□□□ -1.28
SNCAIP-203ENST00000379538 KRTAP3-2Q9BYR7 98 aa7.06□□□□□ -1.28
SNCAIP-203ENST00000379538 NDUFAF8A1L188 74 aa7.03□□□□□ -1.28
SNCAIP-203ENST00000379538 HMCN2Q8NDA2 5059 aa7.01□□□□□ -1.29
SNCAIP-203ENST00000379538 KRTAP12-2P59991 146 aa6.99□□□□□ -1.29
SNCAIP-203ENST00000379538 RNF213Q63HN8 5207 aa6.96□□□□□ -1.3
SNCAIP-203ENST00000379538 KRTAP15-1Q3LI76 137 aa6.95□□□□□ -1.3
SNCAIP-203ENST00000379538 UBR4Q5T4S7 5183 aa6.95□□□□□ -1.3
SNCAIP-203ENST00000379538 S4R3F8 94 aa6.94□□□□□ -1.3
SNCAIP-203ENST00000379538 KRTAP12-1P59990 96 aa6.84□□□□□ -1.31
SNCAIP-203ENST00000379538 KRTAP4-1Q9BYQ7 146 aa6.82□□□□□ -1.32
SNCAIP-203ENST00000379538 MUC17Q685J3 4493 aa6.81□□□□□ -1.32
SNCAIP-203ENST00000379538 FAT4Q6V0I7 4981 aa6.81□□□□□ -1.32
SNCAIP-203ENST00000379538 SEC61BP60468 96 aaKnown RBP6.68□□□□□ -1.34
SNCAIP-203ENST00000379538 LCE2DQ5TA82 110 aaPredicted RBP6.59□□□□□ -1.36
SNCAIP-203ENST00000379538 M0QZ58 72 aa6.57□□□□□ -1.36
SNCAIP-203ENST00000379538 KRTAP19-2Q3LHN2 52 aa6.51□□□□□ -1.37
SNCAIP-203ENST00000379538 LORP23490 312 aaPredicted RBP6.51□□□□□ -1.37
SNCAIP-203ENST00000379538 PLAC4Q8WY50 150 aa6.49□□□□□ -1.37
SNCAIP-203ENST00000379538 R4GN34 69 aa6.48□□□□□ -1.37
SNCAIP-203ENST00000379538 FLGP20930 4061 aaPredicted RBP6.46□□□□□ -1.38
SNCAIP-203ENST00000379538 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
SNCAIP-203ENST00000379538 A0A0A0MQY5 61 aa6.37□□□□□ -1.39
SNCAIP-203ENST00000379538 LUZP6Q538Z0 58 aa6.33□□□□□ -1.4
SNCAIP-203ENST00000379538 M0R2T5 61 aa6.25□□□□□ -1.41
SNCAIP-203ENST00000379538 MT1HP80294 61 aa6.25□□□□□ -1.41
SNCAIP-203ENST00000379538 CAMK2N1Q7Z7J9 78 aa6.21□□□□□ -1.41
SNCAIP-203ENST00000379538 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
SNCAIP-203ENST00000379538 LCE2AQ5TA79 106 aaPredicted RBP6.03□□□□□ -1.44
SNCAIP-203ENST00000379538 KRTAP9-8Q9BYQ0 159 aa6.02□□□□□ -1.45
SNCAIP-203ENST00000379538 MT1FP04733 61 aa6.01□□□□□ -1.45
SNCAIP-203ENST00000379538 USH2AO75445 5202 aa6.01□□□□□ -1.45
SNCAIP-203ENST00000379538 MT2AP02795 61 aa6□□□□□ -1.45
SNCAIP-203ENST00000379538 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
SNCAIP-203ENST00000379538 FSIP2Q5CZC0 6907 aa5.94□□□□□ -1.46
SNCAIP-203ENST00000379538 TNP1P09430 55 aa5.93□□□□□ -1.46
SNCAIP-203ENST00000379538 KRTAP19-1Q8IUB9 90 aa5.88□□□□□ -1.47
SNCAIP-203ENST00000379538 SPRR5A0A1B0GTR4 108 aa5.86□□□□□ -1.47
SNCAIP-203ENST00000379538 KRTAP9-3Q9BYQ3 159 aa5.77□□□□□ -1.49
SNCAIP-203ENST00000379538 SPRR2GQ9BYE4 73 aa5.77□□□□□ -1.49
SNCAIP-203ENST00000379538 LCE2BO14633 110 aa5.7□□□□□ -1.5
SNCAIP-203ENST00000379538 LCE3AQ5TA76 89 aa5.7□□□□□ -1.5
SNCAIP-203ENST00000379538 KRTAP23-1A1A580 65 aa5.68□□□□□ -1.5
SNCAIP-203ENST00000379538 MT1BP07438 61 aa5.65□□□□□ -1.51
SNCAIP-203ENST00000379538 SSPOA2VEC9 5147 aa5.59□□□□□ -1.51
SNCAIP-203ENST00000379538 KRTAP19-8Q3LI54 63 aa5.59□□□□□ -1.52
SNCAIP-203ENST00000379538 KMT2DO14686 5537 aa5.57□□□□□ -1.52
SNCAIP-203ENST00000379538 PRO2289Q9P1D8 64 aa5.52□□□□□ -1.53
SNCAIP-203ENST00000379538 MT1XP80297 61 aa5.48□□□□□ -1.53
SNCAIP-203ENST00000379538 KRTAP10-5P60370 271 aa5.47□□□□□ -1.53
SNCAIP-203ENST00000379538 KRTAP8-1Q8IUC2 63 aa5.4□□□□□ -1.54
SNCAIP-203ENST00000379538 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
SNCAIP-203ENST00000379538 KRTAP10-7P60409 375 aaPredicted RBP5.35□□□□□ -1.55
SNCAIP-203ENST00000379538 KRTAP9-2Q9BYQ4 174 aa5.34□□□□□ -1.55
SNCAIP-203ENST00000379538 INE1O15225 51 aa5.34□□□□□ -1.55
SNCAIP-203ENST00000379538 FCGBPQ9Y6R7 5405 aaPredicted RBP5.32□□□□□ -1.56
SNCAIP-203ENST00000379538 KRTAP10-12P60413 245 aa5.3□□□□□ -1.56
SNCAIP-203ENST00000379538 KRTAP19-6Q3LI70 58 aa5.29□□□□□ -1.56
SNCAIP-203ENST00000379538 KRTAP4-8A0A0G2JLE6 195 aa5.23□□□□□ -1.57
SNCAIP-203ENST00000379538 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
SNCAIP-203ENST00000379538 CRCT1Q9UGL9 99 aa5.15□□□□□ -1.58
SNCAIP-203ENST00000379538 MACF1Q9UPN3 7388 aaKnown RBP5.14□□□□□ -1.59
SNCAIP-203ENST00000379538 SYNE2Q8WXH0 6885 aaKnown RBP5.11□□□□□ -1.59
SNCAIP-203ENST00000379538 MUC12Q9UKN1 5478 aa5.09□□□□□ -1.6
SNCAIP-203ENST00000379538 KRTAP19-5Q3LI72 72 aa5.08□□□□□ -1.6
SNCAIP-203ENST00000379538 KRTAP9-6A8MVA2 160 aa5.05□□□□□ -1.6
SNCAIP-203ENST00000379538 LCE3CQ5T5A8 94 aa5.04□□□□□ -1.6
SNCAIP-203ENST00000379538 KRTAP9-6A0A140TA67 174 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms