RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 NDUFC1O43677 76 aa11.76□□□□□ -0.53
TM6SF1-204ENST00000379390 KRTAP3-3Q9BYR6 98 aa11.71□□□□□ -0.53
TM6SF1-204ENST00000379390 ACYP2P14621 99 aa11.68□□□□□ -0.54
TM6SF1-204ENST00000379390 CSAG1Q6PB30 78 aa11.65□□□□□ -0.54
TM6SF1-204ENST00000379390 KRTAP9-8Q9BYQ0 159 aa11.63□□□□□ -0.55
TM6SF1-204ENST00000379390 MT2AP02795 61 aa11.55□□□□□ -0.56
TM6SF1-204ENST00000379390 CHKB-CPT1BH3BT56 60 aa11.5□□□□□ -0.57
TM6SF1-204ENST00000379390 MT1FP04733 61 aa11.48□□□□□ -0.57
TM6SF1-204ENST00000379390 COA5Q86WW8 74 aa11.46□□□□□ -0.58
TM6SF1-204ENST00000379390 KRTAP10-10P60014 251 aa11.44□□□□□ -0.58
TM6SF1-204ENST00000379390 PCP4P48539 62 aa11.42□□□□□ -0.58
TM6SF1-204ENST00000379390 TMEM258P61165 79 aa11.38□□□□□ -0.59
TM6SF1-204ENST00000379390 ATP5EP56381 51 aaPredicted RBP11.38□□□□□ -0.59
TM6SF1-204ENST00000379390 SPTSSBQ8NFR3 76 aa11.37□□□□□ -0.59
TM6SF1-204ENST00000379390 H0YAA0 97 aa11.29□□□□□ -0.6
TM6SF1-204ENST00000379390 ADM2Q7Z4H4 148 aa11.27□□□□□ -0.61
TM6SF1-204ENST00000379390 KRTAP9-3Q9BYQ3 159 aa11.23□□□□□ -0.61
TM6SF1-204ENST00000379390 LCE2DQ5TA82 110 aaPredicted RBP11.21□□□□□ -0.61
TM6SF1-204ENST00000379390 KRTAP9-2Q9BYQ4 174 aa11.17□□□□□ -0.62
TM6SF1-204ENST00000379390 P0C880 135 aa11.14□□□□□ -0.63
TM6SF1-204ENST00000379390 KRTAP3-2Q9BYR7 98 aa11.13□□□□□ -0.63
TM6SF1-204ENST00000379390 LCE2BO14633 110 aa11.05□□□□□ -0.64
TM6SF1-204ENST00000379390 KRTAP19-1Q8IUB9 90 aa11.03□□□□□ -0.64
TM6SF1-204ENST00000379390 SERP1Q9Y6X1 66 aa11.03□□□□□ -0.64
TM6SF1-204ENST00000379390 CRIPTQ9P021 101 aa11.02□□□□□ -0.65
TM6SF1-204ENST00000379390 SPRR2GQ9BYE4 73 aa10.98□□□□□ -0.65
TM6SF1-204ENST00000379390 SEC61GP60059 68 aa10.92□□□□□ -0.66
TM6SF1-204ENST00000379390 R4GN34 69 aa10.91□□□□□ -0.66
TM6SF1-204ENST00000379390 M0QZ58 72 aa10.88□□□□□ -0.67
TM6SF1-204ENST00000379390 FSIP2Q5CZC0 6907 aa10.86□□□□□ -0.67
TM6SF1-204ENST00000379390 USH2AO75445 5202 aa10.84□□□□□ -0.67
TM6SF1-204ENST00000379390 A0A1B0GU69 56 aa10.84□□□□□ -0.67
TM6SF1-204ENST00000379390 KRTAP19-8Q3LI54 63 aa10.78□□□□□ -0.68
TM6SF1-204ENST00000379390 LINC01558Q9Y6Z2 57 aa10.77□□□□□ -0.68
TM6SF1-204ENST00000379390 Q5VV11 94 aa10.73□□□□□ -0.69
TM6SF1-204ENST00000379390 MT1BP07438 61 aa10.73□□□□□ -0.69
TM6SF1-204ENST00000379390 KRTAP13-4Q3LI77 160 aa10.72□□□□□ -0.69
TM6SF1-204ENST00000379390 LINC01554Q52M75 96 aa10.72□□□□□ -0.69
TM6SF1-204ENST00000379390 A0A1B0GU33 70 aa10.69□□□□□ -0.7
TM6SF1-204ENST00000379390 PRR15LQ9BU68 103 aa10.69□□□□□ -0.7
TM6SF1-204ENST00000379390 RPS28P62857 69 aaKnown RBP10.68□□□□□ -0.7
TM6SF1-204ENST00000379390 CRCT1Q9UGL9 99 aa10.66□□□□□ -0.7
TM6SF1-204ENST00000379390 SMIM26A0A096LP01 95 aa10.63□□□□□ -0.71
TM6SF1-204ENST00000379390 SPATA8Q6RVD6 105 aa10.6□□□□□ -0.71
TM6SF1-204ENST00000379390 SSPOA2VEC9 5147 aa10.58□□□□□ -0.72
TM6SF1-204ENST00000379390 Q1T7F1 81 aa10.58□□□□□ -0.72
TM6SF1-204ENST00000379390 V9GYY9 64 aa10.58□□□□□ -0.72
TM6SF1-204ENST00000379390 KRTAP9-6A0A140TA67 174 aa10.52□□□□□ -0.73
TM6SF1-204ENST00000379390 PSPHP1O15172 72 aa10.51□□□□□ -0.73
TM6SF1-204ENST00000379390 KRTAP19-6Q3LI70 58 aa10.48□□□□□ -0.73
TM6SF1-204ENST00000379390 PLAC4Q8WY50 150 aa10.48□□□□□ -0.73
TM6SF1-204ENST00000379390 A0A0D9SG42 100 aa10.47□□□□□ -0.73
TM6SF1-204ENST00000379390 A6NN06 94 aa10.41□□□□□ -0.74
TM6SF1-204ENST00000379390 UQCR11O14957 56 aa10.37□□□□□ -0.75
TM6SF1-204ENST00000379390 A8MU10 97 aa10.36□□□□□ -0.75
TM6SF1-204ENST00000379390 FCGBPQ9Y6R7 5405 aaPredicted RBP10.3□□□□□ -0.76
TM6SF1-204ENST00000379390 KRTAP10-5P60370 271 aa10.29□□□□□ -0.76
TM6SF1-204ENST00000379390 KRTAP12-1P59990 96 aa10.25□□□□□ -0.77
TM6SF1-204ENST00000379390 SPINT4Q6UDR6 99 aa10.25□□□□□ -0.77
TM6SF1-204ENST00000379390 MT1XP80297 61 aa10.24□□□□□ -0.77
TM6SF1-204ENST00000379390 MIR22HGQ0VDD5 57 aa10.22□□□□□ -0.77
TM6SF1-204ENST00000379390 KRTAP12-2P59991 146 aa10.21□□□□□ -0.78
TM6SF1-204ENST00000379390 PRO2289Q9P1D8 64 aa10.18□□□□□ -0.78
TM6SF1-204ENST00000379390 A6NED7 52 aa10.17□□□□□ -0.78
TM6SF1-204ENST00000379390 CAMK2N1Q7Z7J9 78 aa10.15□□□□□ -0.78
TM6SF1-204ENST00000379390 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.9□□□□□ -0.82
TM6SF1-204ENST00000379390 MACF1Q9UPN3 7388 aaKnown RBP9.9□□□□□ -0.82
TM6SF1-204ENST00000379390 CDC42SE1Q9NRR8 79 aa9.85□□□□□ -0.83
TM6SF1-204ENST00000379390 K7ERS5 55 aa9.85□□□□□ -0.83
TM6SF1-204ENST00000379390 KRTAP10-7P60409 375 aaPredicted RBP9.81□□□□□ -0.84
TM6SF1-204ENST00000379390 C10orf95Q9H7T3 257 aa9.74□□□□□ -0.85
TM6SF1-204ENST00000379390 KRTAP10-12P60413 245 aa9.69□□□□□ -0.86
TM6SF1-204ENST00000379390 SYNE2Q8WXH0 6885 aaKnown RBP9.64□□□□□ -0.87
TM6SF1-204ENST00000379390 KMT2DO14686 5537 aa9.63□□□□□ -0.87
TM6SF1-204ENST00000379390 BRK1Q8WUW1 75 aa9.6□□□□□ -0.87
TM6SF1-204ENST00000379390 KRTAP4-8A0A0G2JLE6 195 aa9.59□□□□□ -0.87
TM6SF1-204ENST00000379390 KRTAP4-8Q9BYQ9 185 aa9.59□□□□□ -0.87
TM6SF1-204ENST00000379390 KRTAP9-7A8MTY7 169 aa9.56□□□□□ -0.88
TM6SF1-204ENST00000379390 TNP1P09430 55 aa9.53□□□□□ -0.88
TM6SF1-204ENST00000379390 KRTAP8-1Q8IUC2 63 aa9.49□□□□□ -0.89
TM6SF1-204ENST00000379390 KRTAP6-3Q3LI67 103 aa9.45□□□□□ -0.9
TM6SF1-204ENST00000379390 ROMO1P60602 79 aa9.35□□□□□ -0.91
TM6SF1-204ENST00000379390 KRTAP5-9P26371 169 aa9.34□□□□□ -0.91
TM6SF1-204ENST00000379390 KRTAP25-1Q3LHN0 102 aa9.34□□□□□ -0.91
TM6SF1-204ENST00000379390 SPRR2FQ96RM1 72 aa9.3□□□□□ -0.92
TM6SF1-204ENST00000379390 LCE3AQ5TA76 89 aa9.29□□□□□ -0.92
TM6SF1-204ENST00000379390 KRTAP19-7Q3SYF9 63 aa9.13□□□□□ -0.95
TM6SF1-204ENST00000379390 MUC12Q9UKN1 5478 aa9.12□□□□□ -0.95
TM6SF1-204ENST00000379390 KRTAP19-5Q3LI72 72 aa9.12□□□□□ -0.95
TM6SF1-204ENST00000379390 PMAIP1Q13794 54 aa9.04□□□□□ -0.96
TM6SF1-204ENST00000379390 PRO0628Q9UI54 55 aa9.02□□□□□ -0.97
TM6SF1-204ENST00000379390 MT1EP04732 61 aa9.01□□□□□ -0.97
TM6SF1-204ENST00000379390 MDN1Q9NU22 5596 aa9□□□□□ -0.97
TM6SF1-204ENST00000379390 SPRR2EP22531 72 aa8.98□□□□□ -0.97
TM6SF1-204ENST00000379390 SPRR2BP35325 72 aa8.98□□□□□ -0.97
TM6SF1-204ENST00000379390 SPRR2AP35326 72 aa8.98□□□□□ -0.97
TM6SF1-204ENST00000379390 KRTAP23-1A1A580 65 aa8.97□□□□□ -0.97
TM6SF1-204ENST00000379390 LCE1AQ5T7P2 110 aa8.94□□□□□ -0.98
TM6SF1-204ENST00000379390 NEBP20929 6669 aa8.91□□□□□ -0.98
TM6SF1-204ENST00000379390 KRTAP12-3P60328 96 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms