RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 RNF213Q63HN8 5207 aa12.15□□□□□ -0.46
ECHDC3-201ENST00000379215 SMIM26A0A096LP01 95 aa12.14□□□□□ -0.47
ECHDC3-201ENST00000379215 LCA10Q71F78 164 aa12.12□□□□□ -0.47
ECHDC3-201ENST00000379215 KRTAP3-3Q9BYR6 98 aa12.03□□□□□ -0.48
ECHDC3-201ENST00000379215 V9GYY9 64 aa12□□□□□ -0.49
ECHDC3-201ENST00000379215 CSAG1Q6PB30 78 aa11.99□□□□□ -0.49
ECHDC3-201ENST00000379215 LCE2CQ5TA81 110 aa11.97□□□□□ -0.49
ECHDC3-201ENST00000379215 Q1T7F1 81 aa11.93□□□□□ -0.5
ECHDC3-201ENST00000379215 FLGP20930 4061 aaPredicted RBP11.91□□□□□ -0.5
ECHDC3-201ENST00000379215 LINC01558Q9Y6Z2 57 aa11.89□□□□□ -0.51
ECHDC3-201ENST00000379215 SEC61GP60059 68 aa11.83□□□□□ -0.52
ECHDC3-201ENST00000379215 PRR15LQ9BU68 103 aa11.81□□□□□ -0.52
ECHDC3-201ENST00000379215 A0A1B0GU69 56 aa11.78□□□□□ -0.52
ECHDC3-201ENST00000379215 MT1HP80294 61 aa11.78□□□□□ -0.52
ECHDC3-201ENST00000379215 FAT4Q6V0I7 4981 aa11.74□□□□□ -0.53
ECHDC3-201ENST00000379215 H0YAA0 97 aa11.74□□□□□ -0.53
ECHDC3-201ENST00000379215 M0R2T5 61 aa11.71□□□□□ -0.53
ECHDC3-201ENST00000379215 PSPHP1O15172 72 aa11.67□□□□□ -0.54
ECHDC3-201ENST00000379215 ADM2Q7Z4H4 148 aa11.62□□□□□ -0.55
ECHDC3-201ENST00000379215 Q5VV11 94 aa11.57□□□□□ -0.56
ECHDC3-201ENST00000379215 KRTAP3-2Q9BYR7 98 aa11.57□□□□□ -0.56
ECHDC3-201ENST00000379215 KRTAP10-6P60371 365 aaPredicted RBP11.54□□□□□ -0.56
ECHDC3-201ENST00000379215 P0C880 135 aa11.47□□□□□ -0.57
ECHDC3-201ENST00000379215 A0A1B0GU33 70 aa11.46□□□□□ -0.57
ECHDC3-201ENST00000379215 LCE2AQ5TA79 106 aaPredicted RBP11.43□□□□□ -0.58
ECHDC3-201ENST00000379215 UQCR11O14957 56 aa11.42□□□□□ -0.58
ECHDC3-201ENST00000379215 A6NED7 52 aa11.38□□□□□ -0.59
ECHDC3-201ENST00000379215 CRIPTQ9P021 101 aa11.32□□□□□ -0.6
ECHDC3-201ENST00000379215 M0QZ58 72 aa11.31□□□□□ -0.6
ECHDC3-201ENST00000379215 LORP23490 312 aaPredicted RBP11.31□□□□□ -0.6
ECHDC3-201ENST00000379215 KRTAP9-8Q9BYQ0 159 aa11.3□□□□□ -0.6
ECHDC3-201ENST00000379215 MT2AP02795 61 aa11.27□□□□□ -0.61
ECHDC3-201ENST00000379215 R4GN34 69 aa11.27□□□□□ -0.61
ECHDC3-201ENST00000379215 MIR22HGQ0VDD5 57 aa11.25□□□□□ -0.61
ECHDC3-201ENST00000379215 KRTAP10-10P60014 251 aa11.2□□□□□ -0.62
ECHDC3-201ENST00000379215 SPATA8Q6RVD6 105 aa11.2□□□□□ -0.62
ECHDC3-201ENST00000379215 MT1FP04733 61 aa11.18□□□□□ -0.62
ECHDC3-201ENST00000379215 KRTAP13-4Q3LI77 160 aa11.17□□□□□ -0.62
ECHDC3-201ENST00000379215 CDC42SE1Q9NRR8 79 aa11.17□□□□□ -0.62
ECHDC3-201ENST00000379215 BRK1Q8WUW1 75 aa11.1□□□□□ -0.63
ECHDC3-201ENST00000379215 SPRR2GQ9BYE4 73 aa11.02□□□□□ -0.64
ECHDC3-201ENST00000379215 A0A0D9SG42 100 aa10.99□□□□□ -0.65
ECHDC3-201ENST00000379215 A8MU10 97 aa10.99□□□□□ -0.65
ECHDC3-201ENST00000379215 LINC01554Q52M75 96 aa10.98□□□□□ -0.65
ECHDC3-201ENST00000379215 KRTAP19-1Q8IUB9 90 aa10.94□□□□□ -0.66
ECHDC3-201ENST00000379215 KRTAP9-3Q9BYQ3 159 aa10.91□□□□□ -0.66
ECHDC3-201ENST00000379215 A6NN06 94 aa10.9□□□□□ -0.66
ECHDC3-201ENST00000379215 K7ERS5 55 aa10.87□□□□□ -0.67
ECHDC3-201ENST00000379215 PRO0628Q9UI54 55 aa10.81□□□□□ -0.68
ECHDC3-201ENST00000379215 KRTAP12-1P59990 96 aa10.79□□□□□ -0.68
ECHDC3-201ENST00000379215 SPINT4Q6UDR6 99 aa10.78□□□□□ -0.68
ECHDC3-201ENST00000379215 KRTAP19-8Q3LI54 63 aa10.75□□□□□ -0.69
ECHDC3-201ENST00000379215 KRTAP12-2P59991 146 aa10.73□□□□□ -0.69
ECHDC3-201ENST00000379215 PLAC4Q8WY50 150 aa10.68□□□□□ -0.7
ECHDC3-201ENST00000379215 LCE2BO14633 110 aa10.59□□□□□ -0.71
ECHDC3-201ENST00000379215 MT1BP07438 61 aa10.55□□□□□ -0.72
ECHDC3-201ENST00000379215 CAMK2N1Q7Z7J9 78 aa10.55□□□□□ -0.72
ECHDC3-201ENST00000379215 PMAIP1Q13794 54 aa10.51□□□□□ -0.73
ECHDC3-201ENST00000379215 LCE2DQ5TA82 110 aaPredicted RBP10.51□□□□□ -0.73
ECHDC3-201ENST00000379215 ROMO1P60602 79 aa10.31□□□□□ -0.76
ECHDC3-201ENST00000379215 USH2AO75445 5202 aa10.29□□□□□ -0.76
ECHDC3-201ENST00000379215 PRO2289Q9P1D8 64 aa10.26□□□□□ -0.77
ECHDC3-201ENST00000379215 MT1XP80297 61 aa10.19□□□□□ -0.78
ECHDC3-201ENST00000379215 C10orf95Q9H7T3 257 aa10.19□□□□□ -0.78
ECHDC3-201ENST00000379215 KRTAP10-5P60370 271 aa10.17□□□□□ -0.78
ECHDC3-201ENST00000379215 KRTAP9-2Q9BYQ4 174 aa10.11□□□□□ -0.79
ECHDC3-201ENST00000379215 KRTAP19-6Q3LI70 58 aa10.07□□□□□ -0.8
ECHDC3-201ENST00000379215 KTN1-AS1Q86SY8 53 aa10.04□□□□□ -0.8
ECHDC3-201ENST00000379215 KRTAP25-1Q3LHN0 102 aa10.03□□□□□ -0.8
ECHDC3-201ENST00000379215 TNP1P09430 55 aa10.02□□□□□ -0.81
ECHDC3-201ENST00000379215 SSPOA2VEC9 5147 aa9.97□□□□□ -0.81
ECHDC3-201ENST00000379215 FSIP2Q5CZC0 6907 aa9.88□□□□□ -0.83
ECHDC3-201ENST00000379215 PRAC1Q96KF2 57 aa9.76□□□□□ -0.85
ECHDC3-201ENST00000379215 CRCT1Q9UGL9 99 aa9.76□□□□□ -0.85
ECHDC3-201ENST00000379215 KRTAP10-7P60409 375 aaPredicted RBP9.74□□□□□ -0.85
ECHDC3-201ENST00000379215 KRTAP23-1A1A580 65 aa9.72□□□□□ -0.85
ECHDC3-201ENST00000379215 KRTAP10-12P60413 245 aa9.71□□□□□ -0.86
ECHDC3-201ENST00000379215 PP632Q6XCG6 107 aa9.7□□□□□ -0.86
ECHDC3-201ENST00000379215 FCGBPQ9Y6R7 5405 aaPredicted RBP9.59□□□□□ -0.87
ECHDC3-201ENST00000379215 KRTAP9-6A0A140TA67 174 aa9.53□□□□□ -0.88
ECHDC3-201ENST00000379215 LCE3AQ5TA76 89 aa9.53□□□□□ -0.88
ECHDC3-201ENST00000379215 SVIPQ8NHG7 77 aa9.46□□□□□ -0.89
ECHDC3-201ENST00000379215 KRTAP8-1Q8IUC2 63 aa9.38□□□□□ -0.91
ECHDC3-201ENST00000379215 KRTAP4-8A0A0G2JLE6 195 aa9.35□□□□□ -0.91
ECHDC3-201ENST00000379215 KRTAP4-8Q9BYQ9 185 aa9.35□□□□□ -0.91
ECHDC3-201ENST00000379215 KMT2DO14686 5537 aa9.23□□□□□ -0.93
ECHDC3-201ENST00000379215 KRTAP12-3P60328 96 aa9.2□□□□□ -0.94
ECHDC3-201ENST00000379215 KRTAP19-5Q3LI72 72 aa9.16□□□□□ -0.94
ECHDC3-201ENST00000379215 MACF1Q9UPN3 7388 aaKnown RBP9.12□□□□□ -0.95
ECHDC3-201ENST00000379215 KRTAP19-7Q3SYF9 63 aa9.09□□□□□ -0.95
ECHDC3-201ENST00000379215 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.02□□□□□ -0.96
ECHDC3-201ENST00000379215 KRTAP15-1Q3LI76 137 aa8.98□□□□□ -0.97
ECHDC3-201ENST00000379215 MT1EP04732 61 aa8.97□□□□□ -0.97
ECHDC3-201ENST00000379215 SPRR2FQ96RM1 72 aa8.91□□□□□ -0.98
ECHDC3-201ENST00000379215 KRTAP5-9P26371 169 aa8.89□□□□□ -0.99
ECHDC3-201ENST00000379215 SYNE2Q8WXH0 6885 aaKnown RBP8.84□□□□□ -0.99
ECHDC3-201ENST00000379215 KRTAP6-3Q3LI67 103 aa8.82□□□□□ -1
ECHDC3-201ENST00000379215 KRTAP19-4Q3LI73 84 aa8.8□□□□□ -1
ECHDC3-201ENST00000379215 MT1LQ93083 61 aa8.76□□□□□ -1.01
ECHDC3-201ENST00000379215 KRTAP19-3Q7Z4W3 81 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms