RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 ATOX1O00244 68 aa10.3□□□□□ -0.76
GFRA3-202ENST00000378362 KLKP1Q107X0 134 aa10.26□□□□□ -0.77
GFRA3-202ENST00000378362 FAM236AA0A1B0GUQ0 79 aa10.23□□□□□ -0.77
GFRA3-202ENST00000378362 FAM236BA0A1B0GV22 79 aa10.23□□□□□ -0.77
GFRA3-202ENST00000378362 COX7CP15954 63 aa10.21□□□□□ -0.77
GFRA3-202ENST00000378362 MP68P56378 58 aa10.21□□□□□ -0.77
GFRA3-202ENST00000378362 KRTAP3-3Q9BYR6 98 aa10.19□□□□□ -0.78
GFRA3-202ENST00000378362 CSAG1Q6PB30 78 aa10.19□□□□□ -0.78
GFRA3-202ENST00000378362 TMEM258P61165 79 aa10.17□□□□□ -0.78
GFRA3-202ENST00000378362 SERP2Q8N6R1 65 aa10.04□□□□□ -0.8
GFRA3-202ENST00000378362 FCGBPQ9Y6R7 5405 aaPredicted RBP10.04□□□□□ -0.8
GFRA3-202ENST00000378362 KRTAP19-1Q8IUB9 90 aa10.02□□□□□ -0.81
GFRA3-202ENST00000378362 H3BPC8 53 aa10.01□□□□□ -0.81
GFRA3-202ENST00000378362 NDUFC1O43677 76 aa9.98□□□□□ -0.81
GFRA3-202ENST00000378362 A8MUN3 132 aa9.97□□□□□ -0.81
GFRA3-202ENST00000378362 TRAV7A0A075B6U4 112 aa9.96□□□□□ -0.82
GFRA3-202ENST00000378362 PRO0628Q9UI54 55 aa9.92□□□□□ -0.82
GFRA3-202ENST00000378362 DMAC1Q96GE9 116 aa9.86□□□□□ -0.83
GFRA3-202ENST00000378362 CYSTM1Q9H1C7 97 aa9.86□□□□□ -0.83
GFRA3-202ENST00000378362 SNURFQ9Y675 71 aa9.86□□□□□ -0.83
GFRA3-202ENST00000378362 SERP1Q9Y6X1 66 aa9.84□□□□□ -0.83
GFRA3-202ENST00000378362 KRTAP19-6Q3LI70 58 aa9.81□□□□□ -0.84
GFRA3-202ENST00000378362 SPRR2GQ9BYE4 73 aa9.81□□□□□ -0.84
GFRA3-202ENST00000378362 ADM2Q7Z4H4 148 aa9.79□□□□□ -0.84
GFRA3-202ENST00000378362 SMIM26A0A096LP01 95 aa9.76□□□□□ -0.85
GFRA3-202ENST00000378362 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.75□□□□□ -0.85
GFRA3-202ENST00000378362 MT1BP07438 61 aa9.75□□□□□ -0.85
GFRA3-202ENST00000378362 C20orf197Q8N268 126 aa9.75□□□□□ -0.85
GFRA3-202ENST00000378362 ATP5EP56381 51 aaPredicted RBP9.74□□□□□ -0.85
GFRA3-202ENST00000378362 H0YAA0 97 aa9.72□□□□□ -0.85
GFRA3-202ENST00000378362 KRTAP19-8Q3LI54 63 aa9.7□□□□□ -0.86
GFRA3-202ENST00000378362 Q5VV11 94 aa9.7□□□□□ -0.86
GFRA3-202ENST00000378362 H7BZZ5 65 aa9.69□□□□□ -0.86
GFRA3-202ENST00000378362 MACF1Q9UPN3 7388 aaKnown RBP9.67□□□□□ -0.86
GFRA3-202ENST00000378362 ACYP2P14621 99 aa9.67□□□□□ -0.86
GFRA3-202ENST00000378362 P0C880 135 aa9.65□□□□□ -0.86
GFRA3-202ENST00000378362 CRIPTQ9P021 101 aa9.65□□□□□ -0.86
GFRA3-202ENST00000378362 V9GYY9 64 aa9.62□□□□□ -0.87
GFRA3-202ENST00000378362 SYNE2Q8WXH0 6885 aaKnown RBP9.61□□□□□ -0.87
GFRA3-202ENST00000378362 SEC61GP60059 68 aa9.58□□□□□ -0.88
GFRA3-202ENST00000378362 KRTAP3-2Q9BYR7 98 aa9.58□□□□□ -0.88
GFRA3-202ENST00000378362 KRTAP9-7A8MTY7 169 aa9.54□□□□□ -0.88
GFRA3-202ENST00000378362 CHKB-CPT1BH3BT56 60 aa9.53□□□□□ -0.88
GFRA3-202ENST00000378362 A6NN06 94 aa9.51□□□□□ -0.89
GFRA3-202ENST00000378362 SPANXA2-OT1Q8N9U9 137 aa9.5□□□□□ -0.89
GFRA3-202ENST00000378362 R4GN34 69 aa9.48□□□□□ -0.89
GFRA3-202ENST00000378362 BRK1Q8WUW1 75 aa9.47□□□□□ -0.89
GFRA3-202ENST00000378362 M0QZ58 72 aa9.45□□□□□ -0.9
GFRA3-202ENST00000378362 SPTSSBQ8NFR3 76 aa9.42□□□□□ -0.9
GFRA3-202ENST00000378362 KRTAP10-5P60370 271 aa9.41□□□□□ -0.9
GFRA3-202ENST00000378362 LINC01554Q52M75 96 aa9.38□□□□□ -0.91
GFRA3-202ENST00000378362 PMAIP1Q13794 54 aa9.34□□□□□ -0.91
GFRA3-202ENST00000378362 COA5Q86WW8 74 aa9.33□□□□□ -0.92
GFRA3-202ENST00000378362 Q1T7F1 81 aa9.31□□□□□ -0.92
GFRA3-202ENST00000378362 PLAC4Q8WY50 150 aa9.28□□□□□ -0.92
GFRA3-202ENST00000378362 MT1XP80297 61 aa9.21□□□□□ -0.93
GFRA3-202ENST00000378362 KMT2DO14686 5537 aa9.2□□□□□ -0.94
GFRA3-202ENST00000378362 KRTAP13-4Q3LI77 160 aa9.14□□□□□ -0.95
GFRA3-202ENST00000378362 KRTAP6-3Q3LI67 103 aa9.13□□□□□ -0.95
GFRA3-202ENST00000378362 PRO2289Q9P1D8 64 aa9.1□□□□□ -0.95
GFRA3-202ENST00000378362 MUC12Q9UKN1 5478 aa9.08□□□□□ -0.96
GFRA3-202ENST00000378362 KTN1-AS1Q86SY8 53 aa9.02□□□□□ -0.97
GFRA3-202ENST00000378362 PSPHP1O15172 72 aa8.97□□□□□ -0.97
GFRA3-202ENST00000378362 SPATA8Q6RVD6 105 aa8.94□□□□□ -0.98
GFRA3-202ENST00000378362 A0A0D9SG42 100 aa8.91□□□□□ -0.98
GFRA3-202ENST00000378362 MDN1Q9NU22 5596 aa8.88□□□□□ -0.99
GFRA3-202ENST00000378362 A0A1B0GU33 70 aa8.87□□□□□ -0.99
GFRA3-202ENST00000378362 NEBP20929 6669 aa8.86□□□□□ -0.99
GFRA3-202ENST00000378362 KRTAP10-7P60409 375 aaPredicted RBP8.85□□□□□ -0.99
GFRA3-202ENST00000378362 KRTAP4-8A0A0G2JLE6 195 aa8.83□□□□□ -1
GFRA3-202ENST00000378362 KRTAP4-8Q9BYQ9 185 aa8.83□□□□□ -1
GFRA3-202ENST00000378362 A0A1B0GU69 56 aa8.82□□□□□ -1
GFRA3-202ENST00000378362 KRTAP5-9P26371 169 aa8.82□□□□□ -1
GFRA3-202ENST00000378362 KRTAP12-2P59991 146 aa8.8□□□□□ -1
GFRA3-202ENST00000378362 CDC42SE1Q9NRR8 79 aa8.8□□□□□ -1
GFRA3-202ENST00000378362 PRR15LQ9BU68 103 aa8.77□□□□□ -1
GFRA3-202ENST00000378362 CAMK2N1Q7Z7J9 78 aa8.77□□□□□ -1.01
GFRA3-202ENST00000378362 KRTAP8-1Q8IUC2 63 aa8.75□□□□□ -1.01
GFRA3-202ENST00000378362 A6NED7 52 aa8.73□□□□□ -1.01
GFRA3-202ENST00000378362 SPRR2FQ96RM1 72 aa8.73□□□□□ -1.01
GFRA3-202ENST00000378362 SPINT4Q6UDR6 99 aa8.73□□□□□ -1.01
GFRA3-202ENST00000378362 A8MU10 97 aa8.72□□□□□ -1.01
GFRA3-202ENST00000378362 KRTAP10-12P60413 245 aa8.69□□□□□ -1.02
GFRA3-202ENST00000378362 LINC01558Q9Y6Z2 57 aa8.69□□□□□ -1.02
GFRA3-202ENST00000378362 KRTAP12-1P59990 96 aa8.65□□□□□ -1.02
GFRA3-202ENST00000378362 SPRR2EP22531 72 aa8.52□□□□□ -1.05
GFRA3-202ENST00000378362 SPRR2BP35325 72 aa8.52□□□□□ -1.05
GFRA3-202ENST00000378362 SPRR2AP35326 72 aa8.52□□□□□ -1.05
GFRA3-202ENST00000378362 LCE1AQ5T7P2 110 aa8.43□□□□□ -1.06
GFRA3-202ENST00000378362 KRTAP20-1Q3LI63 56 aa8.36□□□□□ -1.07
GFRA3-202ENST00000378362 UQCR11O14957 56 aa8.32□□□□□ -1.08
GFRA3-202ENST00000378362 H3BS24 57 aa8.3□□□□□ -1.08
GFRA3-202ENST00000378362 C10orf95Q9H7T3 257 aa8.28□□□□□ -1.08
GFRA3-202ENST00000378362 PRAC1Q96KF2 57 aa8.25□□□□□ -1.09
GFRA3-202ENST00000378362 KRTAP19-7Q3SYF9 63 aa8.22□□□□□ -1.09
GFRA3-202ENST00000378362 SPRR2DP22532 72 aa8.22□□□□□ -1.09
GFRA3-202ENST00000378362 MIR22HGQ0VDD5 57 aa8.19□□□□□ -1.1
GFRA3-202ENST00000378362 KRTAP2-3P0C7H8 128 aa8.19□□□□□ -1.1
GFRA3-202ENST00000378362 KRTAP2-4Q9BYR9 128 aa8.19□□□□□ -1.1
GFRA3-202ENST00000378362 MT1EP04732 61 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms