RNA–Protein interactions for RNA: ENST00000378152.8

ARHGEF1-204, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-204ENST00000378152 RYR1P21817 5038 aa8.42□□□□□ -1.06
ARHGEF1-204ENST00000378152 COX6B2Q6YFQ2 88 aa8.42□□□□□ -1.06
ARHGEF1-204ENST00000378152 DMBT1Q9UGM3 2413 aaPredicted RBP8.37□□□□□ -1.07
ARHGEF1-204ENST00000378152 K7ERS5 55 aa8.35□□□□□ -1.07
ARHGEF1-204ENST00000378152 Q5VSD8 79 aa8.35□□□□□ -1.07
ARHGEF1-204ENST00000378152 A0A0A0MQY5 61 aa8.3□□□□□ -1.08
ARHGEF1-204ENST00000378152 SPINT4Q6UDR6 99 aa8.3□□□□□ -1.08
ARHGEF1-204ENST00000378152 KRTAP17-1Q9BYP8 105 aa8.3□□□□□ -1.08
ARHGEF1-204ENST00000378152 NDUFAF8A1L188 74 aa8.28□□□□□ -1.08
ARHGEF1-204ENST00000378152 A0A0D9SG42 100 aa8.27□□□□□ -1.09
ARHGEF1-204ENST00000378152 KRTAP10-8P60410 259 aa8.27□□□□□ -1.09
ARHGEF1-204ENST00000378152 TNXBP22105 4242 aa8.27□□□□□ -1.09
ARHGEF1-204ENST00000378152 KRTAP10-6P60371 365 aaPredicted RBP8.24□□□□□ -1.09
ARHGEF1-204ENST00000378152 KRTAP13-4Q3LI77 160 aa8.24□□□□□ -1.09
ARHGEF1-204ENST00000378152 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
ARHGEF1-204ENST00000378152 EPPK1P58107 5090 aaKnown RBP8.23□□□□□ -1.09
ARHGEF1-204ENST00000378152 FAT3Q8TDW7 4589 aa8.23□□□□□ -1.09
ARHGEF1-204ENST00000378152 RPL37P61927 97 aaKnown RBP8.2□□□□□ -1.1
ARHGEF1-204ENST00000378152 KIAA1109Q2LD37 5005 aa8.2□□□□□ -1.1
ARHGEF1-204ENST00000378152 KRTAP3-2Q9BYR7 98 aa8.16□□□□□ -1.1
ARHGEF1-204ENST00000378152 LRP1Q07954 4544 aaKnown RBP8.15□□□□□ -1.1
ARHGEF1-204ENST00000378152 S4R3F8 94 aa8.14□□□□□ -1.11
ARHGEF1-204ENST00000378152 MT1HL1P0DM35 61 aa8.12□□□□□ -1.11
ARHGEF1-204ENST00000378152 XP32Q5T750 250 aa8.09□□□□□ -1.11
ARHGEF1-204ENST00000378152 TPRXLQ17RH7 258 aa8.07□□□□□ -1.12
ARHGEF1-204ENST00000378152 C10orf95Q9H7T3 257 aa8.06□□□□□ -1.12
ARHGEF1-204ENST00000378152 MYCBP2O75592 4640 aa8.04□□□□□ -1.12
ARHGEF1-204ENST00000378152 KRTAP12-2P59991 146 aa7.99□□□□□ -1.13
ARHGEF1-204ENST00000378152 KRTAP4-5Q9BYR2 181 aa7.98□□□□□ -1.13
ARHGEF1-204ENST00000378152 BIRC6Q9NR09 4857 aa7.97□□□□□ -1.13
ARHGEF1-204ENST00000378152 HERC2O95714 4834 aa7.94□□□□□ -1.14
ARHGEF1-204ENST00000378152 KRTAP12-1P59990 96 aa7.88□□□□□ -1.15
ARHGEF1-204ENST00000378152 KRTAP15-1Q3LI76 137 aa7.87□□□□□ -1.15
ARHGEF1-204ENST00000378152 LPAP08519 4548 aa7.86□□□□□ -1.15
ARHGEF1-204ENST00000378152 ABCA13Q86UQ4 5058 aa7.85□□□□□ -1.15
ARHGEF1-204ENST00000378152 LUZP6Q538Z0 58 aa7.77□□□□□ -1.17
ARHGEF1-204ENST00000378152 LRP2P98164 4655 aa7.74□□□□□ -1.17
ARHGEF1-204ENST00000378152 M0QZ58 72 aa7.73□□□□□ -1.17
ARHGEF1-204ENST00000378152 J3QL48 77 aa7.68□□□□□ -1.18
ARHGEF1-204ENST00000378152 R4GN34 69 aa7.59□□□□□ -1.19
ARHGEF1-204ENST00000378152 MUC17Q685J3 4493 aa7.52□□□□□ -1.21
ARHGEF1-204ENST00000378152 LORP23490 312 aaPredicted RBP7.52□□□□□ -1.21
ARHGEF1-204ENST00000378152 PCLOQ9Y6V0 5065 aa7.51□□□□□ -1.21
ARHGEF1-204ENST00000378152 SEC61BP60468 96 aaKnown RBP7.5□□□□□ -1.21
ARHGEF1-204ENST00000378152 HMCN2Q8NDA2 5059 aa7.37□□□□□ -1.23
ARHGEF1-204ENST00000378152 KRTAP4-1Q9BYQ7 146 aa7.36□□□□□ -1.23
ARHGEF1-204ENST00000378152 PLAC4Q8WY50 150 aa7.34□□□□□ -1.23
ARHGEF1-204ENST00000378152 HERC1Q15751 4861 aa7.32□□□□□ -1.24
ARHGEF1-204ENST00000378152 KRTAP19-2Q3LHN2 52 aa7.26□□□□□ -1.25
ARHGEF1-204ENST00000378152 CAMK2N1Q7Z7J9 78 aa7.26□□□□□ -1.25
ARHGEF1-204ENST00000378152 PP632Q6XCG6 107 aa7.11□□□□□ -1.27
ARHGEF1-204ENST00000378152 MUC2Q02817 5179 aa7.1□□□□□ -1.27
ARHGEF1-204ENST00000378152 FLGP20930 4061 aaPredicted RBP7.07□□□□□ -1.28
ARHGEF1-204ENST00000378152 LCE2CQ5TA81 110 aa7□□□□□ -1.29
ARHGEF1-204ENST00000378152 RNF213Q63HN8 5207 aa6.96□□□□□ -1.3
ARHGEF1-204ENST00000378152 TNP1P09430 55 aa6.95□□□□□ -1.3
ARHGEF1-204ENST00000378152 UBR4Q5T4S7 5183 aa6.9□□□□□ -1.31
ARHGEF1-204ENST00000378152 MT1HP80294 61 aa6.81□□□□□ -1.32
ARHGEF1-204ENST00000378152 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
ARHGEF1-204ENST00000378152 FAT4Q6V0I7 4981 aa6.73□□□□□ -1.33
ARHGEF1-204ENST00000378152 SPRR5A0A1B0GTR4 108 aa6.71□□□□□ -1.34
ARHGEF1-204ENST00000378152 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
ARHGEF1-204ENST00000378152 SPRR2GQ9BYE4 73 aa6.66□□□□□ -1.34
ARHGEF1-204ENST00000378152 M0R2T5 61 aa6.64□□□□□ -1.35
ARHGEF1-204ENST00000378152 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
ARHGEF1-204ENST00000378152 KRTAP9-8Q9BYQ0 159 aa6.6□□□□□ -1.35
ARHGEF1-204ENST00000378152 MT2AP02795 61 aa6.58□□□□□ -1.36
ARHGEF1-204ENST00000378152 PRO2289Q9P1D8 64 aa6.54□□□□□ -1.36
ARHGEF1-204ENST00000378152 MT1FP04733 61 aa6.54□□□□□ -1.36
ARHGEF1-204ENST00000378152 KRTAP10-10P60014 251 aa6.51□□□□□ -1.37
ARHGEF1-204ENST00000378152 LCE2AQ5TA79 106 aaPredicted RBP6.47□□□□□ -1.37
ARHGEF1-204ENST00000378152 KRTAP19-8Q3LI54 63 aa6.39□□□□□ -1.39
ARHGEF1-204ENST00000378152 KRTAP9-3Q9BYQ3 159 aa6.36□□□□□ -1.39
ARHGEF1-204ENST00000378152 KRTAP8-1Q8IUC2 63 aa6.35□□□□□ -1.39
ARHGEF1-204ENST00000378152 KRTAP10-5P60370 271 aa6.32□□□□□ -1.4
ARHGEF1-204ENST00000378152 MT1XP80297 61 aa6.3□□□□□ -1.4
ARHGEF1-204ENST00000378152 MT1BP07438 61 aa6.29□□□□□ -1.4
ARHGEF1-204ENST00000378152 KRTAP12-3P60328 96 aa6.25□□□□□ -1.41
ARHGEF1-204ENST00000378152 KRTAP10-12P60413 245 aa6.24□□□□□ -1.41
ARHGEF1-204ENST00000378152 INE1O15225 51 aa6.19□□□□□ -1.42
ARHGEF1-204ENST00000378152 KRTAP10-7P60409 375 aaPredicted RBP6.19□□□□□ -1.42
ARHGEF1-204ENST00000378152 LCE2BO14633 110 aa6.13□□□□□ -1.43
ARHGEF1-204ENST00000378152 KRTAP19-5Q3LI72 72 aa5.96□□□□□ -1.46
ARHGEF1-204ENST00000378152 USH2AO75445 5202 aa5.91□□□□□ -1.46
ARHGEF1-204ENST00000378152 KMT2DO14686 5537 aa5.89□□□□□ -1.47
ARHGEF1-204ENST00000378152 LCE3CQ5T5A8 94 aa5.88□□□□□ -1.47
ARHGEF1-204ENST00000378152 LCE2DQ5TA82 110 aaPredicted RBP5.85□□□□□ -1.47
ARHGEF1-204ENST00000378152 KRTAP4-8A0A0G2JLE6 195 aa5.81□□□□□ -1.48
ARHGEF1-204ENST00000378152 KRTAP4-8Q9BYQ9 185 aa5.81□□□□□ -1.48
ARHGEF1-204ENST00000378152 SSPOA2VEC9 5147 aa5.78□□□□□ -1.48
ARHGEF1-204ENST00000378152 KRTAP19-6Q3LI70 58 aa5.76□□□□□ -1.49
ARHGEF1-204ENST00000378152 KRTAP9-6A8MVA2 160 aa5.74□□□□□ -1.49
ARHGEF1-204ENST00000378152 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
ARHGEF1-204ENST00000378152 KRTAP19-7Q3SYF9 63 aa5.61□□□□□ -1.51
ARHGEF1-204ENST00000378152 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
ARHGEF1-204ENST00000378152 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
ARHGEF1-204ENST00000378152 KRTAP2-1Q9BYU5 128 aa5.52□□□□□ -1.53
ARHGEF1-204ENST00000378152 MT1LQ93083 61 aa5.45□□□□□ -1.54
ARHGEF1-204ENST00000378152 KRTAP9-2Q9BYQ4 174 aa5.44□□□□□ -1.54
ARHGEF1-204ENST00000378152 FSIP2Q5CZC0 6907 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms