RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 DMBT1Q9UGM3 2413 aaPredicted RBP11.86□□□□□ -0.51
FOXA2-201ENST00000377115 FAT3Q8TDW7 4589 aa11.83□□□□□ -0.52
FOXA2-201ENST00000377115 P0C880 135 aa11.83□□□□□ -0.52
FOXA2-201ENST00000377115 KRTAP3-2Q9BYR7 98 aa11.82□□□□□ -0.52
FOXA2-201ENST00000377115 HSPG2P98160 4391 aa11.8□□□□□ -0.52
FOXA2-201ENST00000377115 TPRXLQ17RH7 258 aa11.77□□□□□ -0.53
FOXA2-201ENST00000377115 KRTAP10-8P60410 259 aa11.74□□□□□ -0.53
FOXA2-201ENST00000377115 A0A1B0GVY2 172 aa11.72□□□□□ -0.53
FOXA2-201ENST00000377115 LRP1Q07954 4544 aaKnown RBP11.72□□□□□ -0.53
FOXA2-201ENST00000377115 S4R3F8 94 aa11.7□□□□□ -0.54
FOXA2-201ENST00000377115 TNXBP22105 4242 aa11.7□□□□□ -0.54
FOXA2-201ENST00000377115 C10orf95Q9H7T3 257 aa11.69□□□□□ -0.54
FOXA2-201ENST00000377115 MYCBP2O75592 4640 aa11.64□□□□□ -0.55
FOXA2-201ENST00000377115 SPINT4Q6UDR6 99 aa11.63□□□□□ -0.55
FOXA2-201ENST00000377115 KRTAP12-2P59991 146 aa11.57□□□□□ -0.56
FOXA2-201ENST00000377115 XP32Q5T750 250 aa11.56□□□□□ -0.56
FOXA2-201ENST00000377115 RYR2Q92736 4967 aa11.45□□□□□ -0.58
FOXA2-201ENST00000377115 KRTAP12-1P59990 96 aa11.43□□□□□ -0.58
FOXA2-201ENST00000377115 KRTAP15-1Q3LI76 137 aa11.39□□□□□ -0.59
FOXA2-201ENST00000377115 LPAP08519 4548 aa11.38□□□□□ -0.59
FOXA2-201ENST00000377115 KMT2CQ8NEZ4 4911 aaKnown RBP11.32□□□□□ -0.6
FOXA2-201ENST00000377115 NDUFAF8A1L188 74 aa11.29□□□□□ -0.6
FOXA2-201ENST00000377115 Q5VSD8 79 aa11.28□□□□□ -0.6
FOXA2-201ENST00000377115 M0QZ58 72 aa11.18□□□□□ -0.62
FOXA2-201ENST00000377115 LRP2P98164 4655 aa11.16□□□□□ -0.62
FOXA2-201ENST00000377115 KRTAP17-1Q9BYP8 105 aa11.1□□□□□ -0.63
FOXA2-201ENST00000377115 RYR1P21817 5038 aa11.08□□□□□ -0.64
FOXA2-201ENST00000377115 MT1HL1P0DM35 61 aa11.05□□□□□ -0.64
FOXA2-201ENST00000377115 KRTAP21-3Q3LHN1 58 aa10.94□□□□□ -0.66
FOXA2-201ENST00000377115 KIAA1109Q2LD37 5005 aa10.9□□□□□ -0.66
FOXA2-201ENST00000377115 R4GN34 69 aa10.89□□□□□ -0.67
FOXA2-201ENST00000377115 RYR3Q15413 4870 aa10.87□□□□□ -0.67
FOXA2-201ENST00000377115 LORP23490 312 aaPredicted RBP10.78□□□□□ -0.68
FOXA2-201ENST00000377115 ABCA13Q86UQ4 5058 aa10.76□□□□□ -0.69
FOXA2-201ENST00000377115 PLAC4Q8WY50 150 aa10.69□□□□□ -0.7
FOXA2-201ENST00000377115 MUC17Q685J3 4493 aa10.65□□□□□ -0.7
FOXA2-201ENST00000377115 KRTAP4-1Q9BYQ7 146 aa10.48□□□□□ -0.73
FOXA2-201ENST00000377115 EPPK1P58107 5090 aaKnown RBP10.46□□□□□ -0.74
FOXA2-201ENST00000377115 SEC61BP60468 96 aaKnown RBP10.44□□□□□ -0.74
FOXA2-201ENST00000377115 CAMK2N1Q7Z7J9 78 aa10.39□□□□□ -0.75
FOXA2-201ENST00000377115 PP632Q6XCG6 107 aa10.36□□□□□ -0.75
FOXA2-201ENST00000377115 KRTAP4-5Q9BYR2 181 aa10.36□□□□□ -0.75
FOXA2-201ENST00000377115 KRTAP19-2Q3LHN2 52 aa10.3□□□□□ -0.76
FOXA2-201ENST00000377115 LUZP6Q538Z0 58 aa10.26□□□□□ -0.77
FOXA2-201ENST00000377115 MUC2Q02817 5179 aa10.15□□□□□ -0.78
FOXA2-201ENST00000377115 FLGP20930 4061 aaPredicted RBP10.05□□□□□ -0.8
FOXA2-201ENST00000377115 TNP1P09430 55 aa10.02□□□□□ -0.81
FOXA2-201ENST00000377115 A0A0A0MQY5 61 aa9.98□□□□□ -0.81
FOXA2-201ENST00000377115 J3QL48 77 aa9.98□□□□□ -0.81
FOXA2-201ENST00000377115 HERC2O95714 4834 aa9.91□□□□□ -0.82
FOXA2-201ENST00000377115 PCLOQ9Y6V0 5065 aa9.91□□□□□ -0.82
FOXA2-201ENST00000377115 HERC1Q15751 4861 aa9.9□□□□□ -0.82
FOXA2-201ENST00000377115 KRTAP23-1A1A580 65 aa9.87□□□□□ -0.83
FOXA2-201ENST00000377115 SPRR5A0A1B0GTR4 108 aa9.87□□□□□ -0.83
FOXA2-201ENST00000377115 BIRC6Q9NR09 4857 aa9.79□□□□□ -0.84
FOXA2-201ENST00000377115 FAT4Q6V0I7 4981 aa9.64□□□□□ -0.87
FOXA2-201ENST00000377115 SPRR2GQ9BYE4 73 aa9.56□□□□□ -0.88
FOXA2-201ENST00000377115 KRTAP19-1Q8IUB9 90 aa9.55□□□□□ -0.88
FOXA2-201ENST00000377115 LCE3AQ5TA76 89 aa9.52□□□□□ -0.89
FOXA2-201ENST00000377115 LCE2CQ5TA81 110 aa9.51□□□□□ -0.89
FOXA2-201ENST00000377115 HMCN2Q8NDA2 5059 aa9.42□□□□□ -0.9
FOXA2-201ENST00000377115 M0R2T5 61 aa9.32□□□□□ -0.92
FOXA2-201ENST00000377115 UBR4Q5T4S7 5183 aa9.24□□□□□ -0.93
FOXA2-201ENST00000377115 MT1FP04733 61 aa9.23□□□□□ -0.93
FOXA2-201ENST00000377115 MT1HP80294 61 aa9.21□□□□□ -0.93
FOXA2-201ENST00000377115 KRTAP8-1Q8IUC2 63 aa9.2□□□□□ -0.94
FOXA2-201ENST00000377115 KRTAP10-10P60014 251 aa9.2□□□□□ -0.94
FOXA2-201ENST00000377115 MT2AP02795 61 aa9.19□□□□□ -0.94
FOXA2-201ENST00000377115 RNF213Q63HN8 5207 aa9.14□□□□□ -0.95
FOXA2-201ENST00000377115 PRO2289Q9P1D8 64 aa9.07□□□□□ -0.96
FOXA2-201ENST00000377115 KRTAP9-8Q9BYQ0 159 aa9.07□□□□□ -0.96
FOXA2-201ENST00000377115 KRTAP10-5P60370 271 aa9.06□□□□□ -0.96
FOXA2-201ENST00000377115 KRTAP19-8Q3LI54 63 aa9.05□□□□□ -0.96
FOXA2-201ENST00000377115 MT1XP80297 61 aa9.03□□□□□ -0.96
FOXA2-201ENST00000377115 KRTAP12-3P60328 96 aa9□□□□□ -0.97
FOXA2-201ENST00000377115 MT1BP07438 61 aa9□□□□□ -0.97
FOXA2-201ENST00000377115 KRTAP10-12P60413 245 aa8.97□□□□□ -0.97
FOXA2-201ENST00000377115 INE1O15225 51 aa8.94□□□□□ -0.98
FOXA2-201ENST00000377115 KRTAP10-7P60409 375 aaPredicted RBP8.86□□□□□ -0.99
FOXA2-201ENST00000377115 KRTAP9-3Q9BYQ3 159 aa8.65□□□□□ -1.02
FOXA2-201ENST00000377115 KRTAP19-5Q3LI72 72 aa8.54□□□□□ -1.04
FOXA2-201ENST00000377115 LCE3CQ5T5A8 94 aa8.49□□□□□ -1.05
FOXA2-201ENST00000377115 KMT2DO14686 5537 aa8.46□□□□□ -1.05
FOXA2-201ENST00000377115 USH2AO75445 5202 aa8.36□□□□□ -1.07
FOXA2-201ENST00000377115 KRTAP9-6A8MVA2 160 aa8.31□□□□□ -1.08
FOXA2-201ENST00000377115 LCE2BO14633 110 aa8.29□□□□□ -1.08
FOXA2-201ENST00000377115 KRTAP4-8A0A0G2JLE6 195 aa8.25□□□□□ -1.09
FOXA2-201ENST00000377115 KRTAP4-8Q9BYQ9 185 aa8.25□□□□□ -1.09
FOXA2-201ENST00000377115 KRTAP4-7Q9BYR0 210 aa8.11□□□□□ -1.11
FOXA2-201ENST00000377115 KRTAP2-3P0C7H8 128 aa8.07□□□□□ -1.12
FOXA2-201ENST00000377115 KRTAP2-4Q9BYR9 128 aa8.07□□□□□ -1.12
FOXA2-201ENST00000377115 KRTAP2-1Q9BYU5 128 aa8.07□□□□□ -1.12
FOXA2-201ENST00000377115 KRTAP19-7Q3SYF9 63 aa8.05□□□□□ -1.12
FOXA2-201ENST00000377115 MT1LQ93083 61 aa7.83□□□□□ -1.16
FOXA2-201ENST00000377115 MT1EP04732 61 aa7.77□□□□□ -1.17
FOXA2-201ENST00000377115 LCE2AQ5TA79 106 aaPredicted RBP7.74□□□□□ -1.17
FOXA2-201ENST00000377115 KRTAP19-4Q3LI73 84 aa7.69□□□□□ -1.18
FOXA2-201ENST00000377115 SSPOA2VEC9 5147 aa7.56□□□□□ -1.2
FOXA2-201ENST00000377115 LOC100996750A0A140TA64 210 aa7.54□□□□□ -1.2
FOXA2-201ENST00000377115 KRTAP4-3Q9BYR4 195 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms