RNA–Protein interactions for RNA: ENST00000375323.5

APOA1-204, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-204ENST00000375323 OCR1Q9BZK8 76 aa6.88□□□□□ -1.31
APOA1-204ENST00000375323 MT1BP07438 61 aa6.87□□□□□ -1.31
APOA1-204ENST00000375323 J3QR89 54 aa6.85□□□□□ -1.31
APOA1-204ENST00000375323 KRTAP19-8Q3LI54 63 aa6.85□□□□□ -1.31
APOA1-204ENST00000375323 NDUFC1O43677 76 aa6.84□□□□□ -1.31
APOA1-204ENST00000375323 MP68P56378 58 aa6.84□□□□□ -1.31
APOA1-204ENST00000375323 Q5VV11 94 aa6.84□□□□□ -1.31
APOA1-204ENST00000375323 MACF1Q9UPN3 7388 aaKnown RBP6.84□□□□□ -1.31
APOA1-204ENST00000375323 A8MUN3 132 aa6.82□□□□□ -1.32
APOA1-204ENST00000375323 IMUPQ9GZP8 106 aa6.82□□□□□ -1.32
APOA1-204ENST00000375323 H0YAA0 97 aa6.77□□□□□ -1.33
APOA1-204ENST00000375323 CRIPTQ9P021 101 aa6.77□□□□□ -1.33
APOA1-204ENST00000375323 A6NN06 94 aa6.76□□□□□ -1.33
APOA1-204ENST00000375323 H3BPC8 53 aa6.75□□□□□ -1.33
APOA1-204ENST00000375323 SCGB1A1P11684 91 aa6.75□□□□□ -1.33
APOA1-204ENST00000375323 ADM2Q7Z4H4 148 aa6.7□□□□□ -1.34
APOA1-204ENST00000375323 SYNE2Q8WXH0 6885 aaKnown RBP6.69□□□□□ -1.34
APOA1-204ENST00000375323 KRTAP10-5P60370 271 aa6.69□□□□□ -1.34
APOA1-204ENST00000375323 KRTAP6-3Q3LI67 103 aa6.69□□□□□ -1.34
APOA1-204ENST00000375323 MT-ATP8P03928 68 aa6.65□□□□□ -1.34
APOA1-204ENST00000375323 DMAC1Q96GE9 116 aa6.65□□□□□ -1.34
APOA1-204ENST00000375323 K7ERU9 68 aa6.61□□□□□ -1.35
APOA1-204ENST00000375323 TRAV7A0A075B6U4 112 aa6.57□□□□□ -1.36
APOA1-204ENST00000375323 P0C880 135 aa6.57□□□□□ -1.36
APOA1-204ENST00000375323 SMIM20Q8N5G0 67 aa6.56□□□□□ -1.36
APOA1-204ENST00000375323 C20orf197Q8N268 126 aa6.52□□□□□ -1.37
APOA1-204ENST00000375323 KRTAP3-2Q9BYR7 98 aa6.52□□□□□ -1.37
APOA1-204ENST00000375323 R4GN34 69 aa6.52□□□□□ -1.37
APOA1-204ENST00000375323 ACYP2P14621 99 aa6.51□□□□□ -1.37
APOA1-204ENST00000375323 M0QZ58 72 aa6.47□□□□□ -1.37
APOA1-204ENST00000375323 PLAC4Q8WY50 150 aa6.47□□□□□ -1.37
APOA1-204ENST00000375323 MT1XP80297 61 aa6.44□□□□□ -1.38
APOA1-204ENST00000375323 SNURFQ9Y675 71 aa6.44□□□□□ -1.38
APOA1-204ENST00000375323 PRO2289Q9P1D8 64 aa6.43□□□□□ -1.38
APOA1-204ENST00000375323 SPTSSBQ8NFR3 76 aa6.41□□□□□ -1.38
APOA1-204ENST00000375323 KRTAP5-9P26371 169 aa6.39□□□□□ -1.39
APOA1-204ENST00000375323 LINC01554Q52M75 96 aa6.39□□□□□ -1.39
APOA1-204ENST00000375323 MUC12Q9UKN1 5478 aa6.37□□□□□ -1.39
APOA1-204ENST00000375323 CHKB-CPT1BH3BT56 60 aa6.37□□□□□ -1.39
APOA1-204ENST00000375323 SERP2Q8N6R1 65 aa6.35□□□□□ -1.39
APOA1-204ENST00000375323 SPANXA2-OT1Q8N9U9 137 aa6.34□□□□□ -1.39
APOA1-204ENST00000375323 NEBP20929 6669 aa6.32□□□□□ -1.4
APOA1-204ENST00000375323 KMT2DO14686 5537 aa6.32□□□□□ -1.4
APOA1-204ENST00000375323 KRTAP12-2P59991 146 aa6.26□□□□□ -1.41
APOA1-204ENST00000375323 MDN1Q9NU22 5596 aa6.25□□□□□ -1.41
APOA1-204ENST00000375323 KRTAP8-1Q8IUC2 63 aa6.21□□□□□ -1.42
APOA1-204ENST00000375323 SPRR2FQ96RM1 72 aa6.21□□□□□ -1.42
APOA1-204ENST00000375323 COA5Q86WW8 74 aa6.17□□□□□ -1.42
APOA1-204ENST00000375323 KRTAP4-8A0A0G2JLE6 195 aa6.16□□□□□ -1.42
APOA1-204ENST00000375323 COX7CP15954 63 aa6.16□□□□□ -1.42
APOA1-204ENST00000375323 KRTAP20-1Q3LI63 56 aa6.16□□□□□ -1.42
APOA1-204ENST00000375323 KRTAP13-4Q3LI77 160 aa6.16□□□□□ -1.42
APOA1-204ENST00000375323 KRTAP4-8Q9BYQ9 185 aa6.16□□□□□ -1.42
APOA1-204ENST00000375323 KRTAP10-7P60409 375 aaPredicted RBP6.15□□□□□ -1.42
APOA1-204ENST00000375323 SPRR2EP22531 72 aa6.12□□□□□ -1.43
APOA1-204ENST00000375323 SPRR2BP35325 72 aa6.12□□□□□ -1.43
APOA1-204ENST00000375323 SPRR2AP35326 72 aa6.12□□□□□ -1.43
APOA1-204ENST00000375323 KRTAP10-12P60413 245 aa6.11□□□□□ -1.43
APOA1-204ENST00000375323 CYSTM1Q9H1C7 97 aa6.08□□□□□ -1.44
APOA1-204ENST00000375323 H7BZZ5 65 aa6.07□□□□□ -1.44
APOA1-204ENST00000375323 LCE1AQ5T7P2 110 aa6.05□□□□□ -1.44
APOA1-204ENST00000375323 SEC61GP60059 68 aa6.04□□□□□ -1.44
APOA1-204ENST00000375323 KRTAP2-3P0C7H8 128 aa6.03□□□□□ -1.44
APOA1-204ENST00000375323 KRTAP2-4Q9BYR9 128 aa6.03□□□□□ -1.44
APOA1-204ENST00000375323 SERP1Q9Y6X1 66 aa6.03□□□□□ -1.44
APOA1-204ENST00000375323 CAMK2N1Q7Z7J9 78 aa6□□□□□ -1.45
APOA1-204ENST00000375323 A0A0D9SG42 100 aa5.97□□□□□ -1.45
APOA1-204ENST00000375323 SPATA8Q6RVD6 105 aa5.96□□□□□ -1.46
APOA1-204ENST00000375323 A0A1B0GU33 70 aa5.95□□□□□ -1.46
APOA1-204ENST00000375323 ANAPC13Q9BS18 74 aa5.95□□□□□ -1.46
APOA1-204ENST00000375323 SPRR2DP22532 72 aa5.91□□□□□ -1.46
APOA1-204ENST00000375323 SPINT4Q6UDR6 99 aa5.88□□□□□ -1.47
APOA1-204ENST00000375323 CCDC179H3BU77 68 aa5.85□□□□□ -1.47
APOA1-204ENST00000375323 KRTAP12-1P59990 96 aa5.85□□□□□ -1.47
APOA1-204ENST00000375323 A0A1B0GU69 56 aa5.84□□□□□ -1.47
APOA1-204ENST00000375323 KRTAP2-2Q9BYT5 123 aa5.84□□□□□ -1.47
APOA1-204ENST00000375323 KRTAP2-1Q9BYU5 128 aa5.84□□□□□ -1.47
APOA1-204ENST00000375323 SMIM26A0A096LP01 95 aa5.77□□□□□ -1.49
APOA1-204ENST00000375323 KRTAP19-7Q3SYF9 63 aa5.76□□□□□ -1.49
APOA1-204ENST00000375323 A8MU10 97 aa5.75□□□□□ -1.49
APOA1-204ENST00000375323 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
APOA1-204ENST00000375323 ATP5EP56381 51 aaPredicted RBP5.73□□□□□ -1.49
APOA1-204ENST00000375323 MT1EP04732 61 aa5.7□□□□□ -1.5
APOA1-204ENST00000375323 PRR15LQ9BU68 103 aa5.66□□□□□ -1.5
APOA1-204ENST00000375323 LCE5AQ5TCM9 118 aa5.65□□□□□ -1.5
APOA1-204ENST00000375323 LINC01558Q9Y6Z2 57 aa5.65□□□□□ -1.5
APOA1-204ENST00000375323 KRTAP19-3Q7Z4W3 81 aa5.64□□□□□ -1.51
APOA1-204ENST00000375323 KRTAP19-5Q3LI72 72 aa5.63□□□□□ -1.51
APOA1-204ENST00000375323 PCP4P48539 62 aa5.61□□□□□ -1.51
APOA1-204ENST00000375323 TMEM258P61165 79 aa5.6□□□□□ -1.51
APOA1-204ENST00000375323 C10orf95Q9H7T3 257 aa5.6□□□□□ -1.51
APOA1-204ENST00000375323 TNP1P09430 55 aa5.54□□□□□ -1.52
APOA1-204ENST00000375323 DSTQ03001 7570 aaKnown RBP5.54□□□□□ -1.52
APOA1-204ENST00000375323 LCE3AQ5TA76 89 aa5.52□□□□□ -1.53
APOA1-204ENST00000375323 MT1GP13640 62 aa5.51□□□□□ -1.53
APOA1-204ENST00000375323 UQCR11O14957 56 aa5.49□□□□□ -1.53
APOA1-204ENST00000375323 MT1LQ93083 61 aa5.46□□□□□ -1.54
APOA1-204ENST00000375323 PP632Q6XCG6 107 aa5.45□□□□□ -1.54
APOA1-204ENST00000375323 MT1MQ8N339 61 aa5.42□□□□□ -1.54
APOA1-204ENST00000375323 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms