RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 LINC00304Q8N9R0 145 aa8.04□□□□□ -1.12
A1CF-202ENST00000373993 FAT3Q8TDW7 4589 aa8.03□□□□□ -1.12
A1CF-202ENST00000373993 PKHD1L1Q86WI1 4243 aa8.02□□□□□ -1.13
A1CF-202ENST00000373993 ANAPC11Q9NYG5 84 aa8.01□□□□□ -1.13
A1CF-202ENST00000373993 H0YAA0 97 aa7.99□□□□□ -1.13
A1CF-202ENST00000373993 K7ERS5 55 aa7.97□□□□□ -1.13
A1CF-202ENST00000373993 A0A1B0GU33 70 aa7.95□□□□□ -1.14
A1CF-202ENST00000373993 H1FX-AS1Q4G0G2 97 aa7.91□□□□□ -1.14
A1CF-202ENST00000373993 MT1HL1P0DM35 61 aa7.87□□□□□ -1.15
A1CF-202ENST00000373993 HMCN2Q8NDA2 5059 aa7.87□□□□□ -1.15
A1CF-202ENST00000373993 TNXBP22105 4242 aa7.84□□□□□ -1.15
A1CF-202ENST00000373993 SPINK1P00995 79 aa7.83□□□□□ -1.16
A1CF-202ENST00000373993 P0C880 135 aa7.81□□□□□ -1.16
A1CF-202ENST00000373993 UBR4Q5T4S7 5183 aa7.79□□□□□ -1.16
A1CF-202ENST00000373993 KRTAP13-2Q52LG2 175 aa7.78□□□□□ -1.16
A1CF-202ENST00000373993 RPS29P62273 56 aaKnown RBP7.76□□□□□ -1.17
A1CF-202ENST00000373993 TYMSOSQ8TAI1 123 aa7.76□□□□□ -1.17
A1CF-202ENST00000373993 COX6B2Q6YFQ2 88 aa7.74□□□□□ -1.17
A1CF-202ENST00000373993 KRTAP10-8P60410 259 aa7.71□□□□□ -1.17
A1CF-202ENST00000373993 LRP2P98164 4655 aa7.69□□□□□ -1.18
A1CF-202ENST00000373993 RPL37P61927 97 aaKnown RBP7.66□□□□□ -1.18
A1CF-202ENST00000373993 C20orf166-AS1Q96NR2 134 aa7.64□□□□□ -1.19
A1CF-202ENST00000373993 KRTAP3-1Q9BYR8 98 aa7.63□□□□□ -1.19
A1CF-202ENST00000373993 KRTAP1-4P0C5Y4 121 aa7.62□□□□□ -1.19
A1CF-202ENST00000373993 SPINT4Q6UDR6 99 aa7.62□□□□□ -1.19
A1CF-202ENST00000373993 KRTAP15-1Q3LI76 137 aa7.6□□□□□ -1.19
A1CF-202ENST00000373993 LPAP08519 4548 aa7.58□□□□□ -1.2
A1CF-202ENST00000373993 RNF213Q63HN8 5207 aa7.58□□□□□ -1.2
A1CF-202ENST00000373993 TPRXLQ17RH7 258 aa7.53□□□□□ -1.2
A1CF-202ENST00000373993 CRIPTQ9P021 101 aa7.51□□□□□ -1.21
A1CF-202ENST00000373993 NDUFAF8A1L188 74 aa7.46□□□□□ -1.21
A1CF-202ENST00000373993 KRTAP10-6P60371 365 aaPredicted RBP7.44□□□□□ -1.22
A1CF-202ENST00000373993 MUC2Q02817 5179 aa7.35□□□□□ -1.23
A1CF-202ENST00000373993 KRTAP3-2Q9BYR7 98 aa7.34□□□□□ -1.23
A1CF-202ENST00000373993 S4R3F8 94 aa7.32□□□□□ -1.24
A1CF-202ENST00000373993 KRTAP13-4Q3LI77 160 aa7.31□□□□□ -1.24
A1CF-202ENST00000373993 KRTAP3-3Q9BYR6 98 aa7.29□□□□□ -1.24
A1CF-202ENST00000373993 XP32Q5T750 250 aa7.29□□□□□ -1.24
A1CF-202ENST00000373993 C10orf95Q9H7T3 257 aa7.26□□□□□ -1.25
A1CF-202ENST00000373993 A0A0A0MQY5 61 aa7.25□□□□□ -1.25
A1CF-202ENST00000373993 A0A0D9SG42 100 aa7.24□□□□□ -1.25
A1CF-202ENST00000373993 C9orf92A6NGG3 77 aa7.24□□□□□ -1.25
A1CF-202ENST00000373993 LOC100996750A0A140TA64 210 aa7.2□□□□□ -1.26
A1CF-202ENST00000373993 KRTAP4-6Q9BYQ5 205 aa7.2□□□□□ -1.26
A1CF-202ENST00000373993 M0QZ58 72 aa7.18□□□□□ -1.26
A1CF-202ENST00000373993 KRTAP12-1P59990 96 aa7.17□□□□□ -1.26
A1CF-202ENST00000373993 KRTAP12-2P59991 146 aa7.16□□□□□ -1.26
A1CF-202ENST00000373993 MUC17Q685J3 4493 aa7.14□□□□□ -1.27
A1CF-202ENST00000373993 FAT4Q6V0I7 4981 aa7.09□□□□□ -1.28
A1CF-202ENST00000373993 LUZP6Q538Z0 58 aa7.08□□□□□ -1.28
A1CF-202ENST00000373993 SEC61BP60468 96 aaKnown RBP7□□□□□ -1.29
A1CF-202ENST00000373993 PLAC4Q8WY50 150 aa7□□□□□ -1.29
A1CF-202ENST00000373993 LCE2AQ5TA79 106 aaPredicted RBP6.99□□□□□ -1.29
A1CF-202ENST00000373993 KRTAP4-1Q9BYQ7 146 aa6.99□□□□□ -1.29
A1CF-202ENST00000373993 PP632Q6XCG6 107 aa6.91□□□□□ -1.3
A1CF-202ENST00000373993 KRTAP9-2Q9BYQ4 174 aa6.89□□□□□ -1.31
A1CF-202ENST00000373993 LCE2CQ5TA81 110 aa6.77□□□□□ -1.33
A1CF-202ENST00000373993 KRTAP19-2Q3LHN2 52 aa6.75□□□□□ -1.33
A1CF-202ENST00000373993 MT1HP80294 61 aa6.71□□□□□ -1.33
A1CF-202ENST00000373993 R4GN34 69 aa6.68□□□□□ -1.34
A1CF-202ENST00000373993 KRTAP23-1A1A580 65 aa6.67□□□□□ -1.34
A1CF-202ENST00000373993 M0R2T5 61 aa6.66□□□□□ -1.34
A1CF-202ENST00000373993 KRTAP9-6A0A140TA67 174 aa6.65□□□□□ -1.34
A1CF-202ENST00000373993 FSIP2Q5CZC0 6907 aa6.63□□□□□ -1.35
A1CF-202ENST00000373993 FLGP20930 4061 aaPredicted RBP6.61□□□□□ -1.35
A1CF-202ENST00000373993 SPRR5A0A1B0GTR4 108 aa6.57□□□□□ -1.36
A1CF-202ENST00000373993 CAMK2N1Q7Z7J9 78 aa6.57□□□□□ -1.36
A1CF-202ENST00000373993 LORP23490 312 aaPredicted RBP6.57□□□□□ -1.36
A1CF-202ENST00000373993 CRCT1Q9UGL9 99 aa6.49□□□□□ -1.37
A1CF-202ENST00000373993 PRO2289Q9P1D8 64 aa6.42□□□□□ -1.38
A1CF-202ENST00000373993 TNP1P09430 55 aa6.34□□□□□ -1.39
A1CF-202ENST00000373993 INE1O15225 51 aa6.33□□□□□ -1.4
A1CF-202ENST00000373993 KRTAP9-8Q9BYQ0 159 aa6.33□□□□□ -1.4
A1CF-202ENST00000373993 KRTAP4-8Q9BYQ9 185 aa6.29□□□□□ -1.4
A1CF-202ENST00000373993 LCE2BO14633 110 aa6.26□□□□□ -1.41
A1CF-202ENST00000373993 MT2AP02795 61 aa6.25□□□□□ -1.41
A1CF-202ENST00000373993 USH2AO75445 5202 aa6.22□□□□□ -1.41
A1CF-202ENST00000373993 MT1FP04733 61 aa6.22□□□□□ -1.41
A1CF-202ENST00000373993 KRTAP10-10P60014 251 aa6.2□□□□□ -1.42
A1CF-202ENST00000373993 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.19□□□□□ -1.42
A1CF-202ENST00000373993 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
A1CF-202ENST00000373993 KRTAP9-3Q9BYQ3 159 aa6.12□□□□□ -1.43
A1CF-202ENST00000373993 KRTAP19-1Q8IUB9 90 aa6.04□□□□□ -1.44
A1CF-202ENST00000373993 FCGBPQ9Y6R7 5405 aaPredicted RBP6.02□□□□□ -1.45
A1CF-202ENST00000373993 KRTAP9-7A8MTY7 169 aa5.98□□□□□ -1.45
A1CF-202ENST00000373993 KRTAP4-8A0A0G2JLE6 195 aa5.95□□□□□ -1.46
A1CF-202ENST00000373993 LCE3BQ5TA77 95 aa5.93□□□□□ -1.46
A1CF-202ENST00000373993 MACF1Q9UPN3 7388 aaKnown RBP5.88□□□□□ -1.47
A1CF-202ENST00000373993 SYNE2Q8WXH0 6885 aaKnown RBP5.88□□□□□ -1.47
A1CF-202ENST00000373993 KRTAP19-6Q3LI70 58 aa5.87□□□□□ -1.47
A1CF-202ENST00000373993 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
A1CF-202ENST00000373993 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
A1CF-202ENST00000373993 KRTAP8-1Q8IUC2 63 aa5.84□□□□□ -1.48
A1CF-202ENST00000373993 SPRR2GQ9BYE4 73 aa5.81□□□□□ -1.48
A1CF-202ENST00000373993 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
A1CF-202ENST00000373993 LCE3AQ5TA76 89 aa5.76□□□□□ -1.49
A1CF-202ENST00000373993 MT1BP07438 61 aa5.67□□□□□ -1.5
A1CF-202ENST00000373993 KRTAP4-12Q9BQ66 201 aa5.66□□□□□ -1.5
A1CF-202ENST00000373993 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
A1CF-202ENST00000373993 KRTAP6-3Q3LI67 103 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms