RNA–Protein interactions for RNA: ENST00000373625.7

KPNA6-201, Transcript of karyopherin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA6, Length 7,378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA6-201ENST00000373625 KRTAP3-3Q9BYR6 98 aa3.44□□□□□ -1.86
KPNA6-201ENST00000373625 DCHS2Q6V1P9 2916 aa3.43□□□□□ -1.86
KPNA6-201ENST00000373625 HERC2O95714 4834 aa3.43□□□□□ -1.86
KPNA6-201ENST00000373625 DYNC2H1Q8NCM8 4307 aaKnown RBP3.43□□□□□ -1.86
KPNA6-201ENST00000373625 FAT2Q9NYQ8 4349 aa3.43□□□□□ -1.86
KPNA6-201ENST00000373625 DNHD1Q96M86 4753 aa3.42□□□□□ -1.86
KPNA6-201ENST00000373625 DNAH2Q9P225 4427 aa3.41□□□□□ -1.86
KPNA6-201ENST00000373625 VPS13DQ5THJ4 4388 aa3.41□□□□□ -1.86
KPNA6-201ENST00000373625 DNAH10Q8IVF4 4471 aa3.4□□□□□ -1.87
KPNA6-201ENST00000373625 MUC3AQ02505 3323 aa3.39□□□□□ -1.87
KPNA6-201ENST00000373625 DNAH11Q96DT5 4516 aa3.39□□□□□ -1.87
KPNA6-201ENST00000373625 KMT2AQ03164 3969 aa3.38□□□□□ -1.87
KPNA6-201ENST00000373625 KRTAP3-2Q9BYR7 98 aa3.38□□□□□ -1.87
KPNA6-201ENST00000373625 VPS13BQ7Z7G8 4022 aa3.37□□□□□ -1.87
KPNA6-201ENST00000373625 FBN1P35555 2871 aaKnown RBP3.37□□□□□ -1.87
KPNA6-201ENST00000373625 PKHD1L1Q86WI1 4243 aa3.36□□□□□ -1.87
KPNA6-201ENST00000373625 INE1O15225 51 aa3.36□□□□□ -1.87
KPNA6-201ENST00000373625 LCE3AQ5TA76 89 aa3.36□□□□□ -1.87
KPNA6-201ENST00000373625 RYR3Q15413 4870 aa3.35□□□□□ -1.87
KPNA6-201ENST00000373625 DNAH17Q9UFH2 4485 aa3.35□□□□□ -1.87
KPNA6-201ENST00000373625 PKD1L1Q8TDX9 2849 aa3.34□□□□□ -1.87
KPNA6-201ENST00000373625 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.87
KPNA6-201ENST00000373625 TENM1Q9UKZ4 2725 aa3.34□□□□□ -1.88
KPNA6-201ENST00000373625 MYCBP2O75592 4640 aa3.34□□□□□ -1.88
KPNA6-201ENST00000373625 DNAH8Q96JB1 4490 aa3.32□□□□□ -1.88
KPNA6-201ENST00000373625 NF1P21359 2839 aa3.32□□□□□ -1.88
KPNA6-201ENST00000373625 HYDINQ4G0P3 5121 aa3.32□□□□□ -1.88
KPNA6-201ENST00000373625 KRTAP12-3P60328 96 aa3.32□□□□□ -1.88
KPNA6-201ENST00000373625 ABCA13Q86UQ4 5058 aa3.32□□□□□ -1.88
KPNA6-201ENST00000373625 PLECQ15149 4684 aaKnown RBP3.32□□□□□ -1.88
KPNA6-201ENST00000373625 OTOGQ6ZRI0 2925 aa3.32□□□□□ -1.88
KPNA6-201ENST00000373625 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
KPNA6-201ENST00000373625 ZANQ9Y493 2812 aa3.31□□□□□ -1.88
KPNA6-201ENST00000373625 TGP01266 2768 aa3.3□□□□□ -1.88
KPNA6-201ENST00000373625 CSMD3Q7Z407 3707 aa3.3□□□□□ -1.88
KPNA6-201ENST00000373625 HECTD4Q9Y4D8 3996 aa3.3□□□□□ -1.88
KPNA6-201ENST00000373625 LYSTQ99698 3801 aa3.3□□□□□ -1.88
KPNA6-201ENST00000373625 DYNC1H1Q14204 4646 aaKnown RBP3.29□□□□□ -1.88
KPNA6-201ENST00000373625 LRP1BQ9NZR2 4599 aa3.28□□□□□ -1.89
KPNA6-201ENST00000373625 KIAA1109Q2LD37 5005 aa3.27□□□□□ -1.89
KPNA6-201ENST00000373625 KRTAP9-6A0A140TA67 174 aa3.27□□□□□ -1.89
KPNA6-201ENST00000373625 LORP23490 312 aaPredicted RBP3.27□□□□□ -1.89
KPNA6-201ENST00000373625 MT1HP80294 61 aa3.26□□□□□ -1.89
KPNA6-201ENST00000373625 VWFP04275 2813 aa3.24□□□□□ -1.89
KPNA6-201ENST00000373625 STARD9Q9P2P6 4700 aa3.21□□□□□ -1.9
KPNA6-201ENST00000373625 KRTAP4-1Q9BYQ7 146 aa3.2□□□□□ -1.9
KPNA6-201ENST00000373625 KRTAP9-2Q9BYQ4 174 aa3.17□□□□□ -1.9
KPNA6-201ENST00000373625 FAT3Q8TDW7 4589 aa3.16□□□□□ -1.9
KPNA6-201ENST00000373625 EPPK1P58107 5090 aaKnown RBP3.13□□□□□ -1.91
KPNA6-201ENST00000373625 PKHD1P08F94 4074 aa3.13□□□□□ -1.91
KPNA6-201ENST00000373625 KRTAP10-5P60370 271 aa3.13□□□□□ -1.91
KPNA6-201ENST00000373625 DNAH5Q8TE73 4624 aa3.11□□□□□ -1.91
KPNA6-201ENST00000373625 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
KPNA6-201ENST00000373625 MT2AP02795 61 aa3.1□□□□□ -1.91
KPNA6-201ENST00000373625 SRRM2Q9UQ35 2752 aaKnown RBP3.1□□□□□ -1.91
KPNA6-201ENST00000373625 SPRR2GQ9BYE4 73 aa3.08□□□□□ -1.92
KPNA6-201ENST00000373625 HSPG2P98160 4391 aa3.07□□□□□ -1.92
KPNA6-201ENST00000373625 SACSQ9NZJ4 4579 aa3.07□□□□□ -1.92
KPNA6-201ENST00000373625 SPRR2FQ96RM1 72 aa3.06□□□□□ -1.92
KPNA6-201ENST00000373625 TNXBP22105 4242 aa3.05□□□□□ -1.92
KPNA6-201ENST00000373625 MT1FP04733 61 aa3.04□□□□□ -1.92
KPNA6-201ENST00000373625 KRTAP10-7P60409 375 aaPredicted RBP3.04□□□□□ -1.92
KPNA6-201ENST00000373625 RNF213Q63HN8 5207 aa3.04□□□□□ -1.92
KPNA6-201ENST00000373625 MEGF8Q7Z7M0 2845 aa3.04□□□□□ -1.92
KPNA6-201ENST00000373625 KRTAP19-5Q3LI72 72 aa3.03□□□□□ -1.92
KPNA6-201ENST00000373625 LCE2DQ5TA82 110 aaPredicted RBP3.02□□□□□ -1.93
KPNA6-201ENST00000373625 MUC17Q685J3 4493 aa3.02□□□□□ -1.93
KPNA6-201ENST00000373625 SPRR2EP22531 72 aa3.01□□□□□ -1.93
KPNA6-201ENST00000373625 SPRR2BP35325 72 aa3.01□□□□□ -1.93
KPNA6-201ENST00000373625 SPRR2AP35326 72 aa3.01□□□□□ -1.93
KPNA6-201ENST00000373625 PKD1P98161 4303 aa3□□□□□ -1.93
KPNA6-201ENST00000373625 APOBP04114 4563 aaKnown RBP2.98□□□□□ -1.93
KPNA6-201ENST00000373625 COL7A1Q02388 2944 aa2.98□□□□□ -1.93
KPNA6-201ENST00000373625 LCE3CQ5T5A8 94 aa2.96□□□□□ -1.94
KPNA6-201ENST00000373625 FAT1Q14517 4588 aa2.94□□□□□ -1.94
KPNA6-201ENST00000373625 UBR4Q5T4S7 5183 aa2.94□□□□□ -1.94
KPNA6-201ENST00000373625 KRTAP9-7A8MTY7 169 aa2.93□□□□□ -1.94
KPNA6-201ENST00000373625 SPRR2DP22532 72 aa2.91□□□□□ -1.94
KPNA6-201ENST00000373625 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
KPNA6-201ENST00000373625 LCE2CQ5TA81 110 aa2.85□□□□□ -1.95
KPNA6-201ENST00000373625 FLGP20930 4061 aaPredicted RBP2.85□□□□□ -1.95
KPNA6-201ENST00000373625 LCE2BO14633 110 aa2.85□□□□□ -1.95
KPNA6-201ENST00000373625 FAT4Q6V0I7 4981 aa2.85□□□□□ -1.95
KPNA6-201ENST00000373625 KRTAP19-8Q3LI54 63 aa2.82□□□□□ -1.96
KPNA6-201ENST00000373625 KRTAP19-1Q8IUB9 90 aa2.82□□□□□ -1.96
KPNA6-201ENST00000373625 LPAP08519 4548 aa2.81□□□□□ -1.96
KPNA6-201ENST00000373625 MT1XP80297 61 aa2.78□□□□□ -1.96
KPNA6-201ENST00000373625 LCE3BQ5TA77 95 aa2.77□□□□□ -1.97
KPNA6-201ENST00000373625 KRTAP9-8Q9BYQ0 159 aa2.76□□□□□ -1.97
KPNA6-201ENST00000373625 MT1GP13640 62 aa2.75□□□□□ -1.97
KPNA6-201ENST00000373625 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.73□□□□□ -1.97
KPNA6-201ENST00000373625 KRTAP6-3Q3LI67 103 aa2.72□□□□□ -1.97
KPNA6-201ENST00000373625 MT1BP07438 61 aa2.72□□□□□ -1.97
KPNA6-201ENST00000373625 KRTAP9-3Q9BYQ3 159 aa2.71□□□□□ -1.98
KPNA6-201ENST00000373625 LRP1Q07954 4544 aaKnown RBP2.71□□□□□ -1.98
KPNA6-201ENST00000373625 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
KPNA6-201ENST00000373625 USH2AO75445 5202 aa2.7□□□□□ -1.98
KPNA6-201ENST00000373625 KRTAP2-3P0C7H8 128 aa2.7□□□□□ -1.98
KPNA6-201ENST00000373625 KRTAP2-4Q9BYR9 128 aa2.7□□□□□ -1.98
KPNA6-201ENST00000373625 LRP2P98164 4655 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms