RNA–Protein interactions for RNA: ENST00000373583.5

HDAC8-208, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-208ENST00000373583 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
HDAC8-208ENST00000373583 A8MUN3 132 aa7.21□□□□□ -1.26
HDAC8-208ENST00000373583 KLKP1Q107X0 134 aa7.21□□□□□ -1.26
HDAC8-208ENST00000373583 MP68P56378 58 aa7.2□□□□□ -1.26
HDAC8-208ENST00000373583 NDUFC1O43677 76 aa7.16□□□□□ -1.26
HDAC8-208ENST00000373583 KRTAP19-8Q3LI54 63 aa7.16□□□□□ -1.26
HDAC8-208ENST00000373583 MACF1Q9UPN3 7388 aaKnown RBP7.16□□□□□ -1.26
HDAC8-208ENST00000373583 H3BPC8 53 aa7.15□□□□□ -1.26
HDAC8-208ENST00000373583 H0YAA0 97 aa7.14□□□□□ -1.27
HDAC8-208ENST00000373583 MT1BP07438 61 aa7.14□□□□□ -1.27
HDAC8-208ENST00000373583 Q5VV11 94 aa7.14□□□□□ -1.27
HDAC8-208ENST00000373583 IMUPQ9GZP8 106 aa7.14□□□□□ -1.27
HDAC8-208ENST00000373583 CRIPTQ9P021 101 aa7.13□□□□□ -1.27
HDAC8-208ENST00000373583 SCGB1A1P11684 91 aa7.08□□□□□ -1.28
HDAC8-208ENST00000373583 DMAC1Q96GE9 116 aa7.03□□□□□ -1.28
HDAC8-208ENST00000373583 A6NN06 94 aa7.02□□□□□ -1.29
HDAC8-208ENST00000373583 K7ERU9 68 aa7.02□□□□□ -1.29
HDAC8-208ENST00000373583 SYNE2Q8WXH0 6885 aaKnown RBP7□□□□□ -1.29
HDAC8-208ENST00000373583 MT-ATP8P03928 68 aa6.99□□□□□ -1.29
HDAC8-208ENST00000373583 ADM2Q7Z4H4 148 aa6.99□□□□□ -1.29
HDAC8-208ENST00000373583 KRTAP10-5P60370 271 aa6.98□□□□□ -1.29
HDAC8-208ENST00000373583 SMIM20Q8N5G0 67 aa6.96□□□□□ -1.3
HDAC8-208ENST00000373583 TRAV7A0A075B6U4 112 aa6.94□□□□□ -1.3
HDAC8-208ENST00000373583 KRTAP6-3Q3LI67 103 aa6.94□□□□□ -1.3
HDAC8-208ENST00000373583 C20orf197Q8N268 126 aa6.88□□□□□ -1.31
HDAC8-208ENST00000373583 P0C880 135 aa6.85□□□□□ -1.31
HDAC8-208ENST00000373583 ACYP2P14621 99 aa6.83□□□□□ -1.32
HDAC8-208ENST00000373583 R4GN34 69 aa6.82□□□□□ -1.32
HDAC8-208ENST00000373583 KRTAP3-2Q9BYR7 98 aa6.81□□□□□ -1.32
HDAC8-208ENST00000373583 M0QZ58 72 aa6.76□□□□□ -1.33
HDAC8-208ENST00000373583 SPTSSBQ8NFR3 76 aa6.76□□□□□ -1.33
HDAC8-208ENST00000373583 SNURFQ9Y675 71 aa6.75□□□□□ -1.33
HDAC8-208ENST00000373583 PLAC4Q8WY50 150 aa6.74□□□□□ -1.33
HDAC8-208ENST00000373583 PRO2289Q9P1D8 64 aa6.74□□□□□ -1.33
HDAC8-208ENST00000373583 MT1XP80297 61 aa6.72□□□□□ -1.33
HDAC8-208ENST00000373583 SERP2Q8N6R1 65 aa6.72□□□□□ -1.33
HDAC8-208ENST00000373583 SPANXA2-OT1Q8N9U9 137 aa6.72□□□□□ -1.33
HDAC8-208ENST00000373583 CHKB-CPT1BH3BT56 60 aa6.69□□□□□ -1.34
HDAC8-208ENST00000373583 KRTAP5-9P26371 169 aa6.68□□□□□ -1.34
HDAC8-208ENST00000373583 LINC01554Q52M75 96 aa6.63□□□□□ -1.35
HDAC8-208ENST00000373583 NEBP20929 6669 aa6.61□□□□□ -1.35
HDAC8-208ENST00000373583 MUC12Q9UKN1 5478 aa6.61□□□□□ -1.35
HDAC8-208ENST00000373583 KRTAP12-2P59991 146 aa6.57□□□□□ -1.36
HDAC8-208ENST00000373583 KMT2DO14686 5537 aa6.54□□□□□ -1.36
HDAC8-208ENST00000373583 COX7CP15954 63 aa6.52□□□□□ -1.37
HDAC8-208ENST00000373583 COA5Q86WW8 74 aa6.49□□□□□ -1.37
HDAC8-208ENST00000373583 KRTAP8-1Q8IUC2 63 aa6.45□□□□□ -1.38
HDAC8-208ENST00000373583 SPRR2FQ96RM1 72 aa6.45□□□□□ -1.38
HDAC8-208ENST00000373583 MDN1Q9NU22 5596 aa6.45□□□□□ -1.38
HDAC8-208ENST00000373583 H7BZZ5 65 aa6.43□□□□□ -1.38
HDAC8-208ENST00000373583 KRTAP13-4Q3LI77 160 aa6.43□□□□□ -1.38
HDAC8-208ENST00000373583 CYSTM1Q9H1C7 97 aa6.4□□□□□ -1.38
HDAC8-208ENST00000373583 KRTAP10-7P60409 375 aaPredicted RBP6.39□□□□□ -1.39
HDAC8-208ENST00000373583 KRTAP10-12P60413 245 aa6.39□□□□□ -1.39
HDAC8-208ENST00000373583 KRTAP20-1Q3LI63 56 aa6.38□□□□□ -1.39
HDAC8-208ENST00000373583 KRTAP4-8A0A0G2JLE6 195 aa6.36□□□□□ -1.39
HDAC8-208ENST00000373583 KRTAP4-8Q9BYQ9 185 aa6.36□□□□□ -1.39
HDAC8-208ENST00000373583 SEC61GP60059 68 aa6.35□□□□□ -1.39
HDAC8-208ENST00000373583 SPRR2EP22531 72 aa6.34□□□□□ -1.39
HDAC8-208ENST00000373583 SPRR2BP35325 72 aa6.34□□□□□ -1.39
HDAC8-208ENST00000373583 SPRR2AP35326 72 aa6.34□□□□□ -1.39
HDAC8-208ENST00000373583 SERP1Q9Y6X1 66 aa6.33□□□□□ -1.4
HDAC8-208ENST00000373583 ANAPC13Q9BS18 74 aa6.3□□□□□ -1.4
HDAC8-208ENST00000373583 LCE1AQ5T7P2 110 aa6.28□□□□□ -1.4
HDAC8-208ENST00000373583 CAMK2N1Q7Z7J9 78 aa6.27□□□□□ -1.41
HDAC8-208ENST00000373583 A0A1B0GU33 70 aa6.23□□□□□ -1.41
HDAC8-208ENST00000373583 KRTAP2-3P0C7H8 128 aa6.23□□□□□ -1.41
HDAC8-208ENST00000373583 KRTAP2-4Q9BYR9 128 aa6.23□□□□□ -1.41
HDAC8-208ENST00000373583 SPATA8Q6RVD6 105 aa6.21□□□□□ -1.42
HDAC8-208ENST00000373583 A0A0D9SG42 100 aa6.2□□□□□ -1.42
HDAC8-208ENST00000373583 A0A1B0GU69 56 aa6.16□□□□□ -1.42
HDAC8-208ENST00000373583 CCDC179H3BU77 68 aa6.16□□□□□ -1.42
HDAC8-208ENST00000373583 ATP5EP56381 51 aaPredicted RBP6.14□□□□□ -1.43
HDAC8-208ENST00000373583 SPRR2DP22532 72 aa6.13□□□□□ -1.43
HDAC8-208ENST00000373583 KRTAP12-1P59990 96 aa6.13□□□□□ -1.43
HDAC8-208ENST00000373583 SPINT4Q6UDR6 99 aa6.11□□□□□ -1.43
HDAC8-208ENST00000373583 SMIM26A0A096LP01 95 aa6.08□□□□□ -1.44
HDAC8-208ENST00000373583 KRTAP2-2Q9BYT5 123 aa6.04□□□□□ -1.44
HDAC8-208ENST00000373583 KRTAP2-1Q9BYU5 128 aa6.04□□□□□ -1.44
HDAC8-208ENST00000373583 KRTAP19-7Q3SYF9 63 aa6□□□□□ -1.45
HDAC8-208ENST00000373583 PRR15LQ9BU68 103 aa6□□□□□ -1.45
HDAC8-208ENST00000373583 A8MU10 97 aa5.99□□□□□ -1.45
HDAC8-208ENST00000373583 TMEM258P61165 79 aa5.98□□□□□ -1.45
HDAC8-208ENST00000373583 LCE3BQ5TA77 95 aa5.96□□□□□ -1.46
HDAC8-208ENST00000373583 LINC01558Q9Y6Z2 57 aa5.96□□□□□ -1.46
HDAC8-208ENST00000373583 MT1EP04732 61 aa5.95□□□□□ -1.46
HDAC8-208ENST00000373583 LCE5AQ5TCM9 118 aa5.9□□□□□ -1.46
HDAC8-208ENST00000373583 KRTAP19-3Q7Z4W3 81 aa5.89□□□□□ -1.47
HDAC8-208ENST00000373583 KRTAP19-5Q3LI72 72 aa5.84□□□□□ -1.47
HDAC8-208ENST00000373583 C10orf95Q9H7T3 257 aa5.84□□□□□ -1.47
HDAC8-208ENST00000373583 TNP1P09430 55 aa5.82□□□□□ -1.48
HDAC8-208ENST00000373583 UQCR11O14957 56 aa5.81□□□□□ -1.48
HDAC8-208ENST00000373583 PCP4P48539 62 aa5.81□□□□□ -1.48
HDAC8-208ENST00000373583 MT1GP13640 62 aa5.76□□□□□ -1.49
HDAC8-208ENST00000373583 LCE3AQ5TA76 89 aa5.75□□□□□ -1.49
HDAC8-208ENST00000373583 DSTQ03001 7570 aaKnown RBP5.73□□□□□ -1.49
HDAC8-208ENST00000373583 PP632Q6XCG6 107 aa5.71□□□□□ -1.5
HDAC8-208ENST00000373583 MT1LQ93083 61 aa5.7□□□□□ -1.5
HDAC8-208ENST00000373583 MIR22HGQ0VDD5 57 aa5.66□□□□□ -1.5
HDAC8-208ENST00000373583 MT1MQ8N339 61 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms