RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 DMAC1Q96GE9 116 aa9.18□□□□□ -0.94
CDX4-201ENST00000373514 KRTAP10-6P60371 365 aaPredicted RBP9.16□□□□□ -0.94
CDX4-201ENST00000373514 KRTAP3-1Q9BYR8 98 aa9.14□□□□□ -0.95
CDX4-201ENST00000373514 LORP23490 312 aaPredicted RBP9.13□□□□□ -0.95
CDX4-201ENST00000373514 A8MUN3 132 aa9.12□□□□□ -0.95
CDX4-201ENST00000373514 ACYP2P14621 99 aa9.11□□□□□ -0.95
CDX4-201ENST00000373514 SERP1Q9Y6X1 66 aa9.08□□□□□ -0.96
CDX4-201ENST00000373514 COA5Q86WW8 74 aa9.06□□□□□ -0.96
CDX4-201ENST00000373514 H1FX-AS1Q4G0G2 97 aa9.05□□□□□ -0.96
CDX4-201ENST00000373514 RPS28P62857 69 aaKnown RBP8.99□□□□□ -0.97
CDX4-201ENST00000373514 CHKB-CPT1BH3BT56 60 aa8.97□□□□□ -0.97
CDX4-201ENST00000373514 KRTAP9-8Q9BYQ0 159 aa8.95□□□□□ -0.98
CDX4-201ENST00000373514 KRTAP9-2Q9BYQ4 174 aa8.92□□□□□ -0.98
CDX4-201ENST00000373514 S4R3F8 94 aa8.9□□□□□ -0.99
CDX4-201ENST00000373514 MT2AP02795 61 aa8.89□□□□□ -0.99
CDX4-201ENST00000373514 LCA10Q71F78 164 aa8.87□□□□□ -0.99
CDX4-201ENST00000373514 MT1FP04733 61 aa8.84□□□□□ -0.99
CDX4-201ENST00000373514 SMIM26A0A096LP01 95 aa8.82□□□□□ -1
CDX4-201ENST00000373514 SPTSSBQ8NFR3 76 aa8.8□□□□□ -1
CDX4-201ENST00000373514 KRTAP10-10P60014 251 aa8.75□□□□□ -1.01
CDX4-201ENST00000373514 CSAG1Q6PB30 78 aa8.7□□□□□ -1.02
CDX4-201ENST00000373514 Q1T7F1 81 aa8.68□□□□□ -1.02
CDX4-201ENST00000373514 LINC01558Q9Y6Z2 57 aa8.66□□□□□ -1.02
CDX4-201ENST00000373514 V9GYY9 64 aa8.66□□□□□ -1.02
CDX4-201ENST00000373514 KRTAP9-3Q9BYQ3 159 aa8.65□□□□□ -1.02
CDX4-201ENST00000373514 PRR15LQ9BU68 103 aa8.57□□□□□ -1.04
CDX4-201ENST00000373514 A0A1B0GU69 56 aa8.56□□□□□ -1.04
CDX4-201ENST00000373514 PSPHP1O15172 72 aa8.55□□□□□ -1.04
CDX4-201ENST00000373514 SEC61GP60059 68 aa8.54□□□□□ -1.04
CDX4-201ENST00000373514 USH2AO75445 5202 aa8.49□□□□□ -1.05
CDX4-201ENST00000373514 H0YAA0 97 aa8.49□□□□□ -1.05
CDX4-201ENST00000373514 ADM2Q7Z4H4 148 aa8.49□□□□□ -1.05
CDX4-201ENST00000373514 KRTAP9-6A0A140TA67 174 aa8.48□□□□□ -1.05
CDX4-201ENST00000373514 Q5VV11 94 aa8.47□□□□□ -1.05
CDX4-201ENST00000373514 CRCT1Q9UGL9 99 aa8.47□□□□□ -1.05
CDX4-201ENST00000373514 FSIP2Q5CZC0 6907 aa8.45□□□□□ -1.06
CDX4-201ENST00000373514 P0C880 135 aa8.43□□□□□ -1.06
CDX4-201ENST00000373514 KRTAP19-1Q8IUB9 90 aa8.39□□□□□ -1.07
CDX4-201ENST00000373514 SSPOA2VEC9 5147 aa8.35□□□□□ -1.07
CDX4-201ENST00000373514 A0A1B0GU33 70 aa8.34□□□□□ -1.07
CDX4-201ENST00000373514 SPRR2GQ9BYE4 73 aa8.31□□□□□ -1.08
CDX4-201ENST00000373514 A6NED7 52 aa8.29□□□□□ -1.08
CDX4-201ENST00000373514 UQCR11O14957 56 aa8.28□□□□□ -1.08
CDX4-201ENST00000373514 CRIPTQ9P021 101 aa8.25□□□□□ -1.09
CDX4-201ENST00000373514 KRTAP13-4Q3LI77 160 aa8.22□□□□□ -1.09
CDX4-201ENST00000373514 SPATA8Q6RVD6 105 aa8.22□□□□□ -1.09
CDX4-201ENST00000373514 KRTAP19-8Q3LI54 63 aa8.21□□□□□ -1.1
CDX4-201ENST00000373514 MT1BP07438 61 aa8.2□□□□□ -1.1
CDX4-201ENST00000373514 M0QZ58 72 aa8.19□□□□□ -1.1
CDX4-201ENST00000373514 MIR22HGQ0VDD5 57 aa8.19□□□□□ -1.1
CDX4-201ENST00000373514 R4GN34 69 aa8.19□□□□□ -1.1
CDX4-201ENST00000373514 KRTAP19-6Q3LI70 58 aa8.14□□□□□ -1.11
CDX4-201ENST00000373514 CDC42SE1Q9NRR8 79 aa8.11□□□□□ -1.11
CDX4-201ENST00000373514 BRK1Q8WUW1 75 aa8.1□□□□□ -1.11
CDX4-201ENST00000373514 A8MU10 97 aa8.08□□□□□ -1.12
CDX4-201ENST00000373514 A0A0D9SG42 100 aa8.06□□□□□ -1.12
CDX4-201ENST00000373514 FCGBPQ9Y6R7 5405 aaPredicted RBP8.05□□□□□ -1.12
CDX4-201ENST00000373514 LINC01554Q52M75 96 aa8.03□□□□□ -1.12
CDX4-201ENST00000373514 A6NN06 94 aa7.91□□□□□ -1.14
CDX4-201ENST00000373514 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.9□□□□□ -1.14
CDX4-201ENST00000373514 KRTAP10-5P60370 271 aa7.9□□□□□ -1.14
CDX4-201ENST00000373514 KRTAP12-1P59990 96 aa7.89□□□□□ -1.15
CDX4-201ENST00000373514 SPINT4Q6UDR6 99 aa7.88□□□□□ -1.15
CDX4-201ENST00000373514 KRTAP12-2P59991 146 aa7.87□□□□□ -1.15
CDX4-201ENST00000373514 PLAC4Q8WY50 150 aa7.86□□□□□ -1.15
CDX4-201ENST00000373514 PRO0628Q9UI54 55 aa7.85□□□□□ -1.15
CDX4-201ENST00000373514 K7ERS5 55 aa7.83□□□□□ -1.16
CDX4-201ENST00000373514 LOC100996750A0A140TA64 210 aa7.78□□□□□ -1.16
CDX4-201ENST00000373514 MT1XP80297 61 aa7.78□□□□□ -1.16
CDX4-201ENST00000373514 KRTAP4-6Q9BYQ5 205 aa7.78□□□□□ -1.16
CDX4-201ENST00000373514 PRO2289Q9P1D8 64 aa7.68□□□□□ -1.18
CDX4-201ENST00000373514 KRTAP9-7A8MTY7 169 aa7.67□□□□□ -1.18
CDX4-201ENST00000373514 MACF1Q9UPN3 7388 aaKnown RBP7.66□□□□□ -1.18
CDX4-201ENST00000373514 CAMK2N1Q7Z7J9 78 aa7.66□□□□□ -1.18
CDX4-201ENST00000373514 PMAIP1Q13794 54 aa7.65□□□□□ -1.18
CDX4-201ENST00000373514 SVIPQ8NHG7 77 aa7.54□□□□□ -1.2
CDX4-201ENST00000373514 SYNE2Q8WXH0 6885 aaKnown RBP7.5□□□□□ -1.21
CDX4-201ENST00000373514 ROMO1P60602 79 aa7.5□□□□□ -1.21
CDX4-201ENST00000373514 C10orf95Q9H7T3 257 aa7.48□□□□□ -1.21
CDX4-201ENST00000373514 KRTAP10-7P60409 375 aaPredicted RBP7.46□□□□□ -1.22
CDX4-201ENST00000373514 KRTAP6-3Q3LI67 103 aa7.46□□□□□ -1.22
CDX4-201ENST00000373514 KMT2DO14686 5537 aa7.39□□□□□ -1.23
CDX4-201ENST00000373514 KRTAP10-12P60413 245 aa7.37□□□□□ -1.23
CDX4-201ENST00000373514 KRTAP4-8A0A0G2JLE6 195 aa7.35□□□□□ -1.23
CDX4-201ENST00000373514 KRTAP4-8Q9BYQ9 185 aa7.35□□□□□ -1.23
CDX4-201ENST00000373514 KRTAP5-9P26371 169 aa7.3□□□□□ -1.24
CDX4-201ENST00000373514 KTN1-AS1Q86SY8 53 aa7.29□□□□□ -1.24
CDX4-201ENST00000373514 KRTAP8-1Q8IUC2 63 aa7.29□□□□□ -1.24
CDX4-201ENST00000373514 TNP1P09430 55 aa7.27□□□□□ -1.25
CDX4-201ENST00000373514 KRTAP25-1Q3LHN0 102 aa7.25□□□□□ -1.25
CDX4-201ENST00000373514 SPRR2FQ96RM1 72 aa7.22□□□□□ -1.25
CDX4-201ENST00000373514 PRAC1Q96KF2 57 aa7.2□□□□□ -1.26
CDX4-201ENST00000373514 MUC12Q9UKN1 5478 aa7.16□□□□□ -1.26
CDX4-201ENST00000373514 SPRR2EP22531 72 aa7.01□□□□□ -1.29
CDX4-201ENST00000373514 SPRR2BP35325 72 aa7.01□□□□□ -1.29
CDX4-201ENST00000373514 SPRR2AP35326 72 aa7.01□□□□□ -1.29
CDX4-201ENST00000373514 KRTAP23-1A1A580 65 aa6.99□□□□□ -1.29
CDX4-201ENST00000373514 LCE3AQ5TA76 89 aa6.99□□□□□ -1.29
CDX4-201ENST00000373514 NEBP20929 6669 aa6.99□□□□□ -1.29
CDX4-201ENST00000373514 MDN1Q9NU22 5596 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms