RNA–Protein interactions for RNA: ENST00000372991.8

CCND3-203, Transcript of cyclin D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND3, Length 2,085 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-203ENST00000372991 C10orf95Q9H7T3 257 aa13.04□□□□□ -0.32
CCND3-203ENST00000372991 NDUFAF8A1L188 74 aa13.03□□□□□ -0.32
CCND3-203ENST00000372991 KRTAP12-2P59991 146 aa12.89□□□□□ -0.35
CCND3-203ENST00000372991 PKHD1P08F94 4074 aa12.89□□□□□ -0.35
CCND3-203ENST00000372991 KRTAP10-4P60372 401 aaPredicted RBP12.86□□□□□ -0.35
CCND3-203ENST00000372991 SMR3BP02814 79 aaPredicted RBP12.85□□□□□ -0.35
CCND3-203ENST00000372991 XP32Q5T750 250 aa12.82□□□□□ -0.36
CCND3-203ENST00000372991 KRTAP12-1P59990 96 aa12.82□□□□□ -0.36
CCND3-203ENST00000372991 APOBP04114 4563 aaKnown RBP12.8□□□□□ -0.36
CCND3-203ENST00000372991 HYDINQ4G0P3 5121 aa12.78□□□□□ -0.36
CCND3-203ENST00000372991 KMT2CQ8NEZ4 4911 aaKnown RBP12.77□□□□□ -0.36
CCND3-203ENST00000372991 M0QZ58 72 aa12.71□□□□□ -0.38
CCND3-203ENST00000372991 KRTAP10-8P60410 259 aa12.7□□□□□ -0.38
CCND3-203ENST00000372991 DMBT1Q9UGM3 2413 aaPredicted RBP12.68□□□□□ -0.38
CCND3-203ENST00000372991 RYR3Q15413 4870 aa12.58□□□□□ -0.4
CCND3-203ENST00000372991 RYR2Q92736 4967 aa12.54□□□□□ -0.4
CCND3-203ENST00000372991 DYNC1H1Q14204 4646 aaKnown RBP12.53□□□□□ -0.4
CCND3-203ENST00000372991 A0A1B0GVY2 172 aa12.5□□□□□ -0.41
CCND3-203ENST00000372991 FAT3Q8TDW7 4589 aa12.5□□□□□ -0.41
CCND3-203ENST00000372991 LRP1Q07954 4544 aaKnown RBP12.49□□□□□ -0.41
CCND3-203ENST00000372991 FAT1Q14517 4588 aa12.44□□□□□ -0.42
CCND3-203ENST00000372991 TNXBP22105 4242 aa12.43□□□□□ -0.42
CCND3-203ENST00000372991 HSPG2P98160 4391 aa12.3□□□□□ -0.44
CCND3-203ENST00000372991 PLAC4Q8WY50 150 aa12.27□□□□□ -0.45
CCND3-203ENST00000372991 EPPK1P58107 5090 aaKnown RBP12.14□□□□□ -0.47
CCND3-203ENST00000372991 R4GN34 69 aa12.11□□□□□ -0.47
CCND3-203ENST00000372991 LUZP6Q538Z0 58 aa12.1□□□□□ -0.47
CCND3-203ENST00000372991 A0A0A0MQY5 61 aa12.09□□□□□ -0.47
CCND3-203ENST00000372991 PP632Q6XCG6 107 aa12.02□□□□□ -0.48
CCND3-203ENST00000372991 Q5VSD8 79 aa11.99□□□□□ -0.49
CCND3-203ENST00000372991 MYCBP2O75592 4640 aa11.9□□□□□ -0.5
CCND3-203ENST00000372991 MT1HL1P0DM35 61 aa11.79□□□□□ -0.52
CCND3-203ENST00000372991 KIAA1109Q2LD37 5005 aa11.78□□□□□ -0.52
CCND3-203ENST00000372991 BIRC6Q9NR09 4857 aa11.77□□□□□ -0.53
CCND3-203ENST00000372991 LPAP08519 4548 aa11.67□□□□□ -0.54
CCND3-203ENST00000372991 RYR1P21817 5038 aa11.67□□□□□ -0.54
CCND3-203ENST00000372991 LORP23490 312 aaPredicted RBP11.63□□□□□ -0.55
CCND3-203ENST00000372991 CAMK2N1Q7Z7J9 78 aa11.58□□□□□ -0.56
CCND3-203ENST00000372991 KRTAP17-1Q9BYP8 105 aa11.53□□□□□ -0.56
CCND3-203ENST00000372991 LRP2P98164 4655 aa11.53□□□□□ -0.56
CCND3-203ENST00000372991 KRTAP23-1A1A580 65 aa11.5□□□□□ -0.57
CCND3-203ENST00000372991 HERC2O95714 4834 aa11.49□□□□□ -0.57
CCND3-203ENST00000372991 SEC61BP60468 96 aaKnown RBP11.45□□□□□ -0.58
CCND3-203ENST00000372991 SPRR5A0A1B0GTR4 108 aa11.4□□□□□ -0.58
CCND3-203ENST00000372991 ABCA13Q86UQ4 5058 aa11.37□□□□□ -0.59
CCND3-203ENST00000372991 KRTAP4-5Q9BYR2 181 aa11.36□□□□□ -0.59
CCND3-203ENST00000372991 TNP1P09430 55 aa11.31□□□□□ -0.6
CCND3-203ENST00000372991 PCLOQ9Y6V0 5065 aa11.25□□□□□ -0.61
CCND3-203ENST00000372991 MUC17Q685J3 4493 aa11.21□□□□□ -0.61
CCND3-203ENST00000372991 KRTAP19-2Q3LHN2 52 aa11.1□□□□□ -0.63
CCND3-203ENST00000372991 KRTAP4-1Q9BYQ7 146 aa11.08□□□□□ -0.64
CCND3-203ENST00000372991 PRO2289Q9P1D8 64 aa10.86□□□□□ -0.67
CCND3-203ENST00000372991 HERC1Q15751 4861 aa10.86□□□□□ -0.67
CCND3-203ENST00000372991 J3QL48 77 aa10.78□□□□□ -0.68
CCND3-203ENST00000372991 INE1O15225 51 aa10.72□□□□□ -0.69
CCND3-203ENST00000372991 FLGP20930 4061 aaPredicted RBP10.64□□□□□ -0.71
CCND3-203ENST00000372991 SPRR2GQ9BYE4 73 aa10.56□□□□□ -0.72
CCND3-203ENST00000372991 HMCN2Q8NDA2 5059 aa10.51□□□□□ -0.73
CCND3-203ENST00000372991 LCE3AQ5TA76 89 aa10.5□□□□□ -0.73
CCND3-203ENST00000372991 KRTAP8-1Q8IUC2 63 aa10.37□□□□□ -0.75
CCND3-203ENST00000372991 KRTAP19-1Q8IUB9 90 aa10.34□□□□□ -0.75
CCND3-203ENST00000372991 UBR4Q5T4S7 5183 aa10.24□□□□□ -0.77
CCND3-203ENST00000372991 LCE2CQ5TA81 110 aa10.1□□□□□ -0.79
CCND3-203ENST00000372991 RNF213Q63HN8 5207 aa10.07□□□□□ -0.8
CCND3-203ENST00000372991 MUC2Q02817 5179 aa10.03□□□□□ -0.8
CCND3-203ENST00000372991 KRTAP12-3P60328 96 aa10.03□□□□□ -0.8
CCND3-203ENST00000372991 KRTAP19-8Q3LI54 63 aa9.97□□□□□ -0.81
CCND3-203ENST00000372991 KRTAP10-12P60413 245 aa9.94□□□□□ -0.82
CCND3-203ENST00000372991 M0R2T5 61 aa9.9□□□□□ -0.82
CCND3-203ENST00000372991 KRTAP10-10P60014 251 aa9.86□□□□□ -0.83
CCND3-203ENST00000372991 KRTAP10-5P60370 271 aa9.86□□□□□ -0.83
CCND3-203ENST00000372991 MT2AP02795 61 aa9.83□□□□□ -0.84
CCND3-203ENST00000372991 MT1FP04733 61 aa9.83□□□□□ -0.84
CCND3-203ENST00000372991 MT1XP80297 61 aa9.82□□□□□ -0.84
CCND3-203ENST00000372991 MT1HP80294 61 aa9.78□□□□□ -0.84
CCND3-203ENST00000372991 MT1BP07438 61 aa9.71□□□□□ -0.86
CCND3-203ENST00000372991 KRTAP9-8Q9BYQ0 159 aa9.68□□□□□ -0.86
CCND3-203ENST00000372991 FAT4Q6V0I7 4981 aa9.6□□□□□ -0.87
CCND3-203ENST00000372991 KRTAP10-7P60409 375 aaPredicted RBP9.54□□□□□ -0.88
CCND3-203ENST00000372991 LCE3CQ5T5A8 94 aa9.5□□□□□ -0.89
CCND3-203ENST00000372991 KRTAP19-5Q3LI72 72 aa9.3□□□□□ -0.92
CCND3-203ENST00000372991 KRTAP9-3Q9BYQ3 159 aa9.25□□□□□ -0.93
CCND3-203ENST00000372991 KRTAP2-3P0C7H8 128 aa9.19□□□□□ -0.94
CCND3-203ENST00000372991 KRTAP2-4Q9BYR9 128 aa9.19□□□□□ -0.94
CCND3-203ENST00000372991 KRTAP2-1Q9BYU5 128 aa9.19□□□□□ -0.94
CCND3-203ENST00000372991 LCE2AQ5TA79 106 aaPredicted RBP9.18□□□□□ -0.94
CCND3-203ENST00000372991 KRTAP9-6A8MVA2 160 aa9.08□□□□□ -0.96
CCND3-203ENST00000372991 KRTAP19-4Q3LI73 84 aa9.08□□□□□ -0.96
CCND3-203ENST00000372991 KRTAP19-7Q3SYF9 63 aa8.73□□□□□ -1.01
CCND3-203ENST00000372991 KRTAP4-8A0A0G2JLE6 195 aa8.69□□□□□ -1.02
CCND3-203ENST00000372991 LCE2BO14633 110 aa8.69□□□□□ -1.02
CCND3-203ENST00000372991 KRTAP4-8Q9BYQ9 185 aa8.69□□□□□ -1.02
CCND3-203ENST00000372991 KRTAP4-7Q9BYR0 210 aa8.61□□□□□ -1.03
CCND3-203ENST00000372991 FSIP2Q5CZC0 6907 aa8.57□□□□□ -1.04
CCND3-203ENST00000372991 MT1LQ93083 61 aa8.57□□□□□ -1.04
CCND3-203ENST00000372991 KRTAP9-2Q9BYQ4 174 aa8.53□□□□□ -1.04
CCND3-203ENST00000372991 LCE2DQ5TA82 110 aaPredicted RBP8.47□□□□□ -1.05
CCND3-203ENST00000372991 MT1EP04732 61 aa8.46□□□□□ -1.05
CCND3-203ENST00000372991 KMT2DO14686 5537 aa8.43□□□□□ -1.06
CCND3-203ENST00000372991 USH2AO75445 5202 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms