RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 KRTAP13-4Q3LI77 160 aa9.28□□□□□ -0.92
HNF4A-203ENST00000372920 RPL37P61927 97 aaKnown RBP9.27□□□□□ -0.93
HNF4A-203ENST00000372920 KRTAP3-2Q9BYR7 98 aa9.25□□□□□ -0.93
HNF4A-203ENST00000372920 A0A0D9SG42 100 aa9.24□□□□□ -0.93
HNF4A-203ENST00000372920 DMBT1Q9UGM3 2413 aaPredicted RBP9.22□□□□□ -0.93
HNF4A-203ENST00000372920 KRTAP10-8P60410 259 aa9.21□□□□□ -0.93
HNF4A-203ENST00000372920 HSPG2P98160 4391 aa9.2□□□□□ -0.94
HNF4A-203ENST00000372920 LRP1Q07954 4544 aaKnown RBP9.2□□□□□ -0.94
HNF4A-203ENST00000372920 S4R3F8 94 aa9.19□□□□□ -0.94
HNF4A-203ENST00000372920 TNXBP22105 4242 aa9.18□□□□□ -0.94
HNF4A-203ENST00000372920 KRTAP21-3Q3LHN1 58 aa9.17□□□□□ -0.94
HNF4A-203ENST00000372920 XP32Q5T750 250 aa9.15□□□□□ -0.94
HNF4A-203ENST00000372920 P0C880 135 aa9.12□□□□□ -0.95
HNF4A-203ENST00000372920 RYR2Q92736 4967 aa9.11□□□□□ -0.95
HNF4A-203ENST00000372920 TPRXLQ17RH7 258 aa9.09□□□□□ -0.95
HNF4A-203ENST00000372920 MYCBP2O75592 4640 aa9.08□□□□□ -0.96
HNF4A-203ENST00000372920 C10orf95Q9H7T3 257 aa9.01□□□□□ -0.97
HNF4A-203ENST00000372920 Q5VSD8 79 aa9.01□□□□□ -0.97
HNF4A-203ENST00000372920 KRTAP12-2P59991 146 aa9□□□□□ -0.97
HNF4A-203ENST00000372920 KMT2CQ8NEZ4 4911 aaKnown RBP8.98□□□□□ -0.97
HNF4A-203ENST00000372920 SPINT4Q6UDR6 99 aa8.95□□□□□ -0.98
HNF4A-203ENST00000372920 KRTAP12-1P59990 96 aa8.91□□□□□ -0.98
HNF4A-203ENST00000372920 LPAP08519 4548 aa8.87□□□□□ -0.99
HNF4A-203ENST00000372920 KRTAP17-1Q9BYP8 105 aa8.83□□□□□ -1
HNF4A-203ENST00000372920 MT1HL1P0DM35 61 aa8.81□□□□□ -1
HNF4A-203ENST00000372920 RYR1P21817 5038 aa8.8□□□□□ -1
HNF4A-203ENST00000372920 M0QZ58 72 aa8.79□□□□□ -1
HNF4A-203ENST00000372920 KRTAP15-1Q3LI76 137 aa8.76□□□□□ -1.01
HNF4A-203ENST00000372920 LRP2P98164 4655 aa8.75□□□□□ -1.01
HNF4A-203ENST00000372920 KIAA1109Q2LD37 5005 aa8.65□□□□□ -1.02
HNF4A-203ENST00000372920 RYR3Q15413 4870 aa8.64□□□□□ -1.03
HNF4A-203ENST00000372920 NDUFAF8A1L188 74 aa8.64□□□□□ -1.03
HNF4A-203ENST00000372920 R4GN34 69 aa8.55□□□□□ -1.04
HNF4A-203ENST00000372920 ABCA13Q86UQ4 5058 aa8.46□□□□□ -1.06
HNF4A-203ENST00000372920 LORP23490 312 aaPredicted RBP8.44□□□□□ -1.06
HNF4A-203ENST00000372920 MUC17Q685J3 4493 aa8.36□□□□□ -1.07
HNF4A-203ENST00000372920 SEC61BP60468 96 aaKnown RBP8.34□□□□□ -1.07
HNF4A-203ENST00000372920 EPPK1P58107 5090 aaKnown RBP8.32□□□□□ -1.08
HNF4A-203ENST00000372920 KRTAP4-1Q9BYQ7 146 aa8.3□□□□□ -1.08
HNF4A-203ENST00000372920 PLAC4Q8WY50 150 aa8.28□□□□□ -1.08
HNF4A-203ENST00000372920 KRTAP4-5Q9BYR2 181 aa8.28□□□□□ -1.08
HNF4A-203ENST00000372920 KRTAP19-2Q3LHN2 52 aa8.17□□□□□ -1.1
HNF4A-203ENST00000372920 CAMK2N1Q7Z7J9 78 aa8.15□□□□□ -1.1
HNF4A-203ENST00000372920 PP632Q6XCG6 107 aa8.11□□□□□ -1.11
HNF4A-203ENST00000372920 J3QL48 77 aa8.02□□□□□ -1.13
HNF4A-203ENST00000372920 MUC2Q02817 5179 aa7.95□□□□□ -1.14
HNF4A-203ENST00000372920 LUZP6Q538Z0 58 aa7.93□□□□□ -1.14
HNF4A-203ENST00000372920 HERC2O95714 4834 aa7.9□□□□□ -1.15
HNF4A-203ENST00000372920 FLGP20930 4061 aaPredicted RBP7.88□□□□□ -1.15
HNF4A-203ENST00000372920 TNP1P09430 55 aa7.86□□□□□ -1.15
HNF4A-203ENST00000372920 BIRC6Q9NR09 4857 aa7.79□□□□□ -1.16
HNF4A-203ENST00000372920 HERC1Q15751 4861 aa7.78□□□□□ -1.16
HNF4A-203ENST00000372920 KRTAP23-1A1A580 65 aa7.77□□□□□ -1.17
HNF4A-203ENST00000372920 PCLOQ9Y6V0 5065 aa7.75□□□□□ -1.17
HNF4A-203ENST00000372920 SPRR5A0A1B0GTR4 108 aa7.67□□□□□ -1.18
HNF4A-203ENST00000372920 A0A0A0MQY5 61 aa7.66□□□□□ -1.18
HNF4A-203ENST00000372920 SPRR2GQ9BYE4 73 aa7.59□□□□□ -1.19
HNF4A-203ENST00000372920 LCE2CQ5TA81 110 aa7.58□□□□□ -1.2
HNF4A-203ENST00000372920 FAT4Q6V0I7 4981 aa7.57□□□□□ -1.2
HNF4A-203ENST00000372920 KRTAP19-1Q8IUB9 90 aa7.55□□□□□ -1.2
HNF4A-203ENST00000372920 HMCN2Q8NDA2 5059 aa7.51□□□□□ -1.21
HNF4A-203ENST00000372920 LCE3AQ5TA76 89 aa7.44□□□□□ -1.22
HNF4A-203ENST00000372920 M0R2T5 61 aa7.42□□□□□ -1.22
HNF4A-203ENST00000372920 MT1HP80294 61 aa7.35□□□□□ -1.23
HNF4A-203ENST00000372920 MT1FP04733 61 aa7.33□□□□□ -1.24
HNF4A-203ENST00000372920 KRTAP10-10P60014 251 aa7.31□□□□□ -1.24
HNF4A-203ENST00000372920 MT2AP02795 61 aa7.3□□□□□ -1.24
HNF4A-203ENST00000372920 KRTAP8-1Q8IUC2 63 aa7.24□□□□□ -1.25
HNF4A-203ENST00000372920 KRTAP9-8Q9BYQ0 159 aa7.23□□□□□ -1.25
HNF4A-203ENST00000372920 UBR4Q5T4S7 5183 aa7.21□□□□□ -1.25
HNF4A-203ENST00000372920 KRTAP19-8Q3LI54 63 aa7.2□□□□□ -1.26
HNF4A-203ENST00000372920 RNF213Q63HN8 5207 aa7.2□□□□□ -1.26
HNF4A-203ENST00000372920 KRTAP10-5P60370 271 aa7.16□□□□□ -1.26
HNF4A-203ENST00000372920 MT1XP80297 61 aa7.14□□□□□ -1.27
HNF4A-203ENST00000372920 MT1BP07438 61 aa7.13□□□□□ -1.27
HNF4A-203ENST00000372920 KRTAP12-3P60328 96 aa7.07□□□□□ -1.28
HNF4A-203ENST00000372920 KRTAP10-12P60413 245 aa7.06□□□□□ -1.28
HNF4A-203ENST00000372920 KRTAP10-7P60409 375 aaPredicted RBP6.97□□□□□ -1.29
HNF4A-203ENST00000372920 PRO2289Q9P1D8 64 aa6.95□□□□□ -1.3
HNF4A-203ENST00000372920 KRTAP9-3Q9BYQ3 159 aa6.9□□□□□ -1.3
HNF4A-203ENST00000372920 INE1O15225 51 aa6.9□□□□□ -1.31
HNF4A-203ENST00000372920 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.34
HNF4A-203ENST00000372920 LCE3CQ5T5A8 94 aa6.67□□□□□ -1.34
HNF4A-203ENST00000372920 LCE2BO14633 110 aa6.61□□□□□ -1.35
HNF4A-203ENST00000372920 KMT2DO14686 5537 aa6.54□□□□□ -1.36
HNF4A-203ENST00000372920 USH2AO75445 5202 aa6.53□□□□□ -1.36
HNF4A-203ENST00000372920 KRTAP4-8A0A0G2JLE6 195 aa6.5□□□□□ -1.37
HNF4A-203ENST00000372920 KRTAP4-8Q9BYQ9 185 aa6.5□□□□□ -1.37
HNF4A-203ENST00000372920 KRTAP9-6A8MVA2 160 aa6.47□□□□□ -1.37
HNF4A-203ENST00000372920 KRTAP19-7Q3SYF9 63 aa6.36□□□□□ -1.39
HNF4A-203ENST00000372920 KRTAP4-7Q9BYR0 210 aa6.33□□□□□ -1.4
HNF4A-203ENST00000372920 KRTAP2-3P0C7H8 128 aa6.3□□□□□ -1.4
HNF4A-203ENST00000372920 KRTAP2-4Q9BYR9 128 aa6.3□□□□□ -1.4
HNF4A-203ENST00000372920 KRTAP2-1Q9BYU5 128 aa6.3□□□□□ -1.4
HNF4A-203ENST00000372920 LCE2AQ5TA79 106 aaPredicted RBP6.27□□□□□ -1.41
HNF4A-203ENST00000372920 MT1LQ93083 61 aa6.19□□□□□ -1.42
HNF4A-203ENST00000372920 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.42
HNF4A-203ENST00000372920 MT1EP04732 61 aa6.15□□□□□ -1.42
HNF4A-203ENST00000372920 SSPOA2VEC9 5147 aa5.99□□□□□ -1.45
HNF4A-203ENST00000372920 LOC100996750A0A140TA64 210 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms