RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 CRCT1Q9UGL9 99 aa7.45□□□□□ -1.22
CHCHD1-202ENST00000372837 A0A1B0GU69 56 aa7.44□□□□□ -1.22
CHCHD1-202ENST00000372837 UQCR11O14957 56 aa7.44□□□□□ -1.22
CHCHD1-202ENST00000372837 IGKV2-30P06310 120 aa7.42□□□□□ -1.22
CHCHD1-202ENST00000372837 FSIP2Q5CZC0 6907 aa7.42□□□□□ -1.22
CHCHD1-202ENST00000372837 Q5W150 140 aa7.41□□□□□ -1.22
CHCHD1-202ENST00000372837 LINC00313P59037 77 aa7.39□□□□□ -1.23
CHCHD1-202ENST00000372837 MIR22HGQ0VDD5 57 aa7.37□□□□□ -1.23
CHCHD1-202ENST00000372837 NOTCH2NLQ7Z3S9 236 aa7.36□□□□□ -1.23
CHCHD1-202ENST00000372837 RETNLBQ9BQ08 111 aa7.36□□□□□ -1.23
CHCHD1-202ENST00000372837 LINC01554Q52M75 96 aa7.34□□□□□ -1.23
CHCHD1-202ENST00000372837 KRTAP10-8P60410 259 aa7.32□□□□□ -1.24
CHCHD1-202ENST00000372837 ANAPC11Q9NYG5 84 aa7.32□□□□□ -1.24
CHCHD1-202ENST00000372837 SPINK6Q6UWN8 80 aa7.3□□□□□ -1.24
CHCHD1-202ENST00000372837 IGKV2D-30A0A075B6S6 120 aa7.28□□□□□ -1.24
CHCHD1-202ENST00000372837 KRTAP16-1A8MUX0 517 aa7.25□□□□□ -1.25
CHCHD1-202ENST00000372837 RPS29P62273 56 aaKnown RBP7.2□□□□□ -1.26
CHCHD1-202ENST00000372837 KRTAP13-2Q52LG2 175 aa7.2□□□□□ -1.26
CHCHD1-202ENST00000372837 SPINK1P00995 79 aa7.17□□□□□ -1.26
CHCHD1-202ENST00000372837 PRAC1Q96KF2 57 aa7.15□□□□□ -1.26
CHCHD1-202ENST00000372837 KRTAP1-4P0C5Y4 121 aa7.14□□□□□ -1.27
CHCHD1-202ENST00000372837 TYMSOSQ8TAI1 123 aa7.13□□□□□ -1.27
CHCHD1-202ENST00000372837 KRTAP9-7A8MTY7 169 aa7.11□□□□□ -1.27
CHCHD1-202ENST00000372837 ADM2Q7Z4H4 148 aa7.06□□□□□ -1.28
CHCHD1-202ENST00000372837 LINC00304Q8N9R0 145 aa7.05□□□□□ -1.28
CHCHD1-202ENST00000372837 A8MUU9 505 aa7.04□□□□□ -1.28
CHCHD1-202ENST00000372837 CSAG1Q6PB30 78 aa7.04□□□□□ -1.28
CHCHD1-202ENST00000372837 K7ERS5 55 aa7□□□□□ -1.29
CHCHD1-202ENST00000372837 MUC17Q685J3 4493 aa6.99□□□□□ -1.29
CHCHD1-202ENST00000372837 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.99□□□□□ -1.29
CHCHD1-202ENST00000372837 KRTAP25-1Q3LHN0 102 aa6.99□□□□□ -1.29
CHCHD1-202ENST00000372837 A0A1B0GU33 70 aa6.98□□□□□ -1.29
CHCHD1-202ENST00000372837 H1FX-AS1Q4G0G2 97 aa6.95□□□□□ -1.3
CHCHD1-202ENST00000372837 C20orf166-AS1Q96NR2 134 aa6.95□□□□□ -1.3
CHCHD1-202ENST00000372837 H0YAA0 97 aa6.92□□□□□ -1.3
CHCHD1-202ENST00000372837 H3BS24 57 aa6.87□□□□□ -1.31
CHCHD1-202ENST00000372837 COX6B2Q6YFQ2 88 aa6.87□□□□□ -1.31
CHCHD1-202ENST00000372837 ROMO1P60602 79 aa6.86□□□□□ -1.31
CHCHD1-202ENST00000372837 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
CHCHD1-202ENST00000372837 C9orf92A6NGG3 77 aa6.74□□□□□ -1.33
CHCHD1-202ENST00000372837 RPL37P61927 97 aaKnown RBP6.72□□□□□ -1.33
CHCHD1-202ENST00000372837 KRTAP4-1Q9BYQ7 146 aa6.72□□□□□ -1.33
CHCHD1-202ENST00000372837 TPRXLQ17RH7 258 aa6.7□□□□□ -1.34
CHCHD1-202ENST00000372837 MT1HP80294 61 aa6.64□□□□□ -1.35
CHCHD1-202ENST00000372837 SSPOA2VEC9 5147 aa6.63□□□□□ -1.35
CHCHD1-202ENST00000372837 KRTAP10-6P60371 365 aaPredicted RBP6.62□□□□□ -1.35
CHCHD1-202ENST00000372837 KRTAP19-2Q3LHN2 52 aa6.59□□□□□ -1.35
CHCHD1-202ENST00000372837 USH2AO75445 5202 aa6.59□□□□□ -1.36
CHCHD1-202ENST00000372837 FCGBPQ9Y6R7 5405 aaPredicted RBP6.57□□□□□ -1.36
CHCHD1-202ENST00000372837 LOC100996750A0A140TA64 210 aa6.55□□□□□ -1.36
CHCHD1-202ENST00000372837 KRTAP4-6Q9BYQ5 205 aa6.55□□□□□ -1.36
CHCHD1-202ENST00000372837 SYNE2Q8WXH0 6885 aaKnown RBP6.52□□□□□ -1.37
CHCHD1-202ENST00000372837 XP32Q5T750 250 aa6.5□□□□□ -1.37
CHCHD1-202ENST00000372837 CRIPTQ9P021 101 aa6.5□□□□□ -1.37
CHCHD1-202ENST00000372837 P0C880 135 aa6.49□□□□□ -1.37
CHCHD1-202ENST00000372837 SEC61BP60468 96 aaKnown RBP6.48□□□□□ -1.37
CHCHD1-202ENST00000372837 S4R3F8 94 aa6.47□□□□□ -1.37
CHCHD1-202ENST00000372837 M0QZ58 72 aa6.45□□□□□ -1.38
CHCHD1-202ENST00000372837 SPINT4Q6UDR6 99 aa6.45□□□□□ -1.38
CHCHD1-202ENST00000372837 KRTAP15-1Q3LI76 137 aa6.42□□□□□ -1.38
CHCHD1-202ENST00000372837 M0R2T5 61 aa6.4□□□□□ -1.38
CHCHD1-202ENST00000372837 MACF1Q9UPN3 7388 aaKnown RBP6.4□□□□□ -1.39
CHCHD1-202ENST00000372837 KRTAP13-4Q3LI77 160 aa6.39□□□□□ -1.39
CHCHD1-202ENST00000372837 KRTAP19-1Q8IUB9 90 aa6.37□□□□□ -1.39
CHCHD1-202ENST00000372837 FLGP20930 4061 aaPredicted RBP6.36□□□□□ -1.39
CHCHD1-202ENST00000372837 A0A0D9SG42 100 aa6.3□□□□□ -1.4
CHCHD1-202ENST00000372837 KRTAP12-1P59990 96 aa6.3□□□□□ -1.4
CHCHD1-202ENST00000372837 KRTAP6-3Q3LI67 103 aa6.26□□□□□ -1.41
CHCHD1-202ENST00000372837 KRTAP12-2P59991 146 aa6.25□□□□□ -1.41
CHCHD1-202ENST00000372837 NEBP20929 6669 aa6.21□□□□□ -1.42
CHCHD1-202ENST00000372837 NDUFAF8A1L188 74 aa6.19□□□□□ -1.42
CHCHD1-202ENST00000372837 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
CHCHD1-202ENST00000372837 KRTAP9-8Q9BYQ0 159 aa6.17□□□□□ -1.42
CHCHD1-202ENST00000372837 KRTAP20-1Q3LI63 56 aa6.15□□□□□ -1.42
CHCHD1-202ENST00000372837 PP632Q6XCG6 107 aa6.14□□□□□ -1.43
CHCHD1-202ENST00000372837 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
CHCHD1-202ENST00000372837 KRTAP19-6Q3LI70 58 aa6.04□□□□□ -1.44
CHCHD1-202ENST00000372837 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
CHCHD1-202ENST00000372837 KRTAP4-12Q9BQ66 201 aa6.03□□□□□ -1.44
CHCHD1-202ENST00000372837 MUC12Q9UKN1 5478 aa6.03□□□□□ -1.44
CHCHD1-202ENST00000372837 PLAC4Q8WY50 150 aa6.02□□□□□ -1.45
CHCHD1-202ENST00000372837 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
CHCHD1-202ENST00000372837 MT2AP02795 61 aa6□□□□□ -1.45
CHCHD1-202ENST00000372837 KRTAP9-3Q9BYQ3 159 aa6□□□□□ -1.45
CHCHD1-202ENST00000372837 R4GN34 69 aa6□□□□□ -1.45
CHCHD1-202ENST00000372837 MT1FP04733 61 aa5.96□□□□□ -1.46
CHCHD1-202ENST00000372837 LUZP6Q538Z0 58 aa5.91□□□□□ -1.46
CHCHD1-202ENST00000372837 A0A0A0MQY5 61 aa5.86□□□□□ -1.47
CHCHD1-202ENST00000372837 KRTAP10-10P60014 251 aa5.86□□□□□ -1.47
CHCHD1-202ENST00000372837 LCE3BQ5TA77 95 aa5.83□□□□□ -1.48
CHCHD1-202ENST00000372837 KMT2DO14686 5537 aa5.81□□□□□ -1.48
CHCHD1-202ENST00000372837 KRTAP2-3P0C7H8 128 aa5.78□□□□□ -1.48
CHCHD1-202ENST00000372837 KRTAP2-4Q9BYR9 128 aa5.78□□□□□ -1.48
CHCHD1-202ENST00000372837 MDN1Q9NU22 5596 aa5.76□□□□□ -1.49
CHCHD1-202ENST00000372837 LCE4AQ5TA78 99 aa5.72□□□□□ -1.49
CHCHD1-202ENST00000372837 SPRR5A0A1B0GTR4 108 aa5.71□□□□□ -1.5
CHCHD1-202ENST00000372837 CAMK2N1Q7Z7J9 78 aa5.7□□□□□ -1.5
CHCHD1-202ENST00000372837 KRTAP9-9Q9BYP9 154 aa5.69□□□□□ -1.5
CHCHD1-202ENST00000372837 KRTAP9-4Q9BYQ2 154 aa5.69□□□□□ -1.5
CHCHD1-202ENST00000372837 TNP1P09430 55 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms