RNA–Protein interactions for RNA: ENST00000372422.6

YIPF3-202, Transcript of Yip1 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF3, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-202ENST00000372422 CHKB-CPT1BH3BT56 60 aa7.78□□□□□ -1.16
YIPF3-202ENST00000372422 UBR4Q5T4S7 5183 aa7.77□□□□□ -1.17
YIPF3-202ENST00000372422 KRTAP4-1Q9BYQ7 146 aa7.75□□□□□ -1.17
YIPF3-202ENST00000372422 RBM12B-AS1Q9P1G2 102 aa7.71□□□□□ -1.18
YIPF3-202ENST00000372422 A6NED7 52 aa7.68□□□□□ -1.18
YIPF3-202ENST00000372422 RNF213Q63HN8 5207 aa7.65□□□□□ -1.19
YIPF3-202ENST00000372422 CDC42SE1Q9NRR8 79 aa7.63□□□□□ -1.19
YIPF3-202ENST00000372422 COX6B2Q6YFQ2 88 aa7.62□□□□□ -1.19
YIPF3-202ENST00000372422 MUC2Q02817 5179 aa7.62□□□□□ -1.19
YIPF3-202ENST00000372422 A0A1B0GU69 56 aa7.59□□□□□ -1.2
YIPF3-202ENST00000372422 SPTSSBQ8NFR3 76 aa7.59□□□□□ -1.2
YIPF3-202ENST00000372422 LCA10Q71F78 164 aa7.57□□□□□ -1.2
YIPF3-202ENST00000372422 H1FX-AS1Q4G0G2 97 aa7.51□□□□□ -1.21
YIPF3-202ENST00000372422 A8MU10 97 aa7.5□□□□□ -1.21
YIPF3-202ENST00000372422 KRTAP3-1Q9BYR8 98 aa7.5□□□□□ -1.21
YIPF3-202ENST00000372422 KRTAP19-2Q3LHN2 52 aa7.5□□□□□ -1.21
YIPF3-202ENST00000372422 PMAIP1Q13794 54 aa7.48□□□□□ -1.21
YIPF3-202ENST00000372422 SEC61GP60059 68 aa7.46□□□□□ -1.21
YIPF3-202ENST00000372422 UQCR11O14957 56 aa7.45□□□□□ -1.22
YIPF3-202ENST00000372422 LCE2CQ5TA81 110 aa7.44□□□□□ -1.22
YIPF3-202ENST00000372422 SPATA8Q6RVD6 105 aa7.42□□□□□ -1.22
YIPF3-202ENST00000372422 S4R3F8 94 aa7.42□□□□□ -1.22
YIPF3-202ENST00000372422 MIR22HGQ0VDD5 57 aa7.38□□□□□ -1.23
YIPF3-202ENST00000372422 A6NN06 94 aa7.37□□□□□ -1.23
YIPF3-202ENST00000372422 FAT4Q6V0I7 4981 aa7.36□□□□□ -1.23
YIPF3-202ENST00000372422 MT1HP80294 61 aa7.34□□□□□ -1.23
YIPF3-202ENST00000372422 M0R2T5 61 aa7.33□□□□□ -1.24
YIPF3-202ENST00000372422 KTN1-AS1Q86SY8 53 aa7.33□□□□□ -1.24
YIPF3-202ENST00000372422 FLGP20930 4061 aaPredicted RBP7.3□□□□□ -1.24
YIPF3-202ENST00000372422 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
YIPF3-202ENST00000372422 KRTAP3-3Q9BYR6 98 aa7.26□□□□□ -1.25
YIPF3-202ENST00000372422 A0A1B0GU33 70 aa7.22□□□□□ -1.25
YIPF3-202ENST00000372422 LCE2AQ5TA79 106 aaPredicted RBP7.21□□□□□ -1.25
YIPF3-202ENST00000372422 H0YAA0 97 aa7.16□□□□□ -1.26
YIPF3-202ENST00000372422 KRTAP10-6P60371 365 aaPredicted RBP7.12□□□□□ -1.27
YIPF3-202ENST00000372422 LORP23490 312 aaPredicted RBP7.07□□□□□ -1.28
YIPF3-202ENST00000372422 KRTAP3-2Q9BYR7 98 aa7.07□□□□□ -1.28
YIPF3-202ENST00000372422 ADM2Q7Z4H4 148 aa7.03□□□□□ -1.28
YIPF3-202ENST00000372422 K7ERS5 55 aa7.03□□□□□ -1.28
YIPF3-202ENST00000372422 KRTAP9-8Q9BYQ0 159 aa7.02□□□□□ -1.29
YIPF3-202ENST00000372422 MT2AP02795 61 aa6.99□□□□□ -1.29
YIPF3-202ENST00000372422 KRTAP10-10P60014 251 aa6.96□□□□□ -1.29
YIPF3-202ENST00000372422 MT1FP04733 61 aa6.93□□□□□ -1.3
YIPF3-202ENST00000372422 P0C880 135 aa6.91□□□□□ -1.3
YIPF3-202ENST00000372422 PRAC1Q96KF2 57 aa6.91□□□□□ -1.3
YIPF3-202ENST00000372422 CRIPTQ9P021 101 aa6.91□□□□□ -1.3
YIPF3-202ENST00000372422 KRTAP13-4Q3LI77 160 aa6.87□□□□□ -1.31
YIPF3-202ENST00000372422 R4GN34 69 aa6.84□□□□□ -1.31
YIPF3-202ENST00000372422 M0QZ58 72 aa6.83□□□□□ -1.32
YIPF3-202ENST00000372422 A0A0D9SG42 100 aa6.8□□□□□ -1.32
YIPF3-202ENST00000372422 KRTAP9-3Q9BYQ3 159 aa6.78□□□□□ -1.32
YIPF3-202ENST00000372422 ROMO1P60602 79 aa6.77□□□□□ -1.33
YIPF3-202ENST00000372422 SPRR2GQ9BYE4 73 aa6.75□□□□□ -1.33
YIPF3-202ENST00000372422 LINC01554Q52M75 96 aa6.73□□□□□ -1.33
YIPF3-202ENST00000372422 KRTAP19-1Q8IUB9 90 aa6.72□□□□□ -1.33
YIPF3-202ENST00000372422 KRTAP25-1Q3LHN0 102 aa6.71□□□□□ -1.34
YIPF3-202ENST00000372422 KRTAP12-1P59990 96 aa6.68□□□□□ -1.34
YIPF3-202ENST00000372422 KRTAP12-2P59991 146 aa6.66□□□□□ -1.34
YIPF3-202ENST00000372422 SPINT4Q6UDR6 99 aa6.63□□□□□ -1.35
YIPF3-202ENST00000372422 LCE2BO14633 110 aa6.61□□□□□ -1.35
YIPF3-202ENST00000372422 KRTAP19-8Q3LI54 63 aa6.6□□□□□ -1.35
YIPF3-202ENST00000372422 PLAC4Q8WY50 150 aa6.53□□□□□ -1.36
YIPF3-202ENST00000372422 KRTAP9-2Q9BYQ4 174 aa6.53□□□□□ -1.36
YIPF3-202ENST00000372422 MT1BP07438 61 aa6.5□□□□□ -1.37
YIPF3-202ENST00000372422 USH2AO75445 5202 aa6.46□□□□□ -1.38
YIPF3-202ENST00000372422 LOC100996750A0A140TA64 210 aa6.41□□□□□ -1.38
YIPF3-202ENST00000372422 KRTAP4-6Q9BYQ5 205 aa6.41□□□□□ -1.38
YIPF3-202ENST00000372422 CAMK2N1Q7Z7J9 78 aa6.39□□□□□ -1.39
YIPF3-202ENST00000372422 FSIP2Q5CZC0 6907 aa6.38□□□□□ -1.39
YIPF3-202ENST00000372422 C10orf95Q9H7T3 257 aa6.35□□□□□ -1.39
YIPF3-202ENST00000372422 PRO2289Q9P1D8 64 aa6.32□□□□□ -1.4
YIPF3-202ENST00000372422 KRTAP19-6Q3LI70 58 aa6.31□□□□□ -1.4
YIPF3-202ENST00000372422 CRCT1Q9UGL9 99 aa6.28□□□□□ -1.4
YIPF3-202ENST00000372422 SSPOA2VEC9 5147 aa6.27□□□□□ -1.41
YIPF3-202ENST00000372422 KRTAP10-5P60370 271 aa6.26□□□□□ -1.41
YIPF3-202ENST00000372422 MT1XP80297 61 aa6.24□□□□□ -1.41
YIPF3-202ENST00000372422 PP632Q6XCG6 107 aa6.16□□□□□ -1.42
YIPF3-202ENST00000372422 KRTAP9-6A0A140TA67 174 aa6.13□□□□□ -1.43
YIPF3-202ENST00000372422 FCGBPQ9Y6R7 5405 aaPredicted RBP6.07□□□□□ -1.44
YIPF3-202ENST00000372422 TNP1P09430 55 aa6.06□□□□□ -1.44
YIPF3-202ENST00000372422 KRTAP23-1A1A580 65 aa6.06□□□□□ -1.44
YIPF3-202ENST00000372422 KRTAP15-1Q3LI76 137 aa6.03□□□□□ -1.44
YIPF3-202ENST00000372422 KRTAP10-7P60409 375 aaPredicted RBP5.97□□□□□ -1.45
YIPF3-202ENST00000372422 KRTAP10-12P60413 245 aa5.94□□□□□ -1.46
YIPF3-202ENST00000372422 MACF1Q9UPN3 7388 aaKnown RBP5.84□□□□□ -1.47
YIPF3-202ENST00000372422 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.8□□□□□ -1.48
YIPF3-202ENST00000372422 KRTAP4-8A0A0G2JLE6 195 aa5.78□□□□□ -1.48
YIPF3-202ENST00000372422 KRTAP4-8Q9BYQ9 185 aa5.78□□□□□ -1.48
YIPF3-202ENST00000372422 KRTAP8-1Q8IUC2 63 aa5.76□□□□□ -1.49
YIPF3-202ENST00000372422 LCE3AQ5TA76 89 aa5.76□□□□□ -1.49
YIPF3-202ENST00000372422 NDUFAF8A1L188 74 aa5.75□□□□□ -1.49
YIPF3-202ENST00000372422 KMT2DO14686 5537 aa5.74□□□□□ -1.49
YIPF3-202ENST00000372422 H3BS24 57 aa5.74□□□□□ -1.49
YIPF3-202ENST00000372422 SYNE2Q8WXH0 6885 aaKnown RBP5.7□□□□□ -1.5
YIPF3-202ENST00000372422 LUZP6Q538Z0 58 aa5.64□□□□□ -1.51
YIPF3-202ENST00000372422 KRTAP6-3Q3LI67 103 aa5.62□□□□□ -1.51
YIPF3-202ENST00000372422 KRTAP5-9P26371 169 aa5.59□□□□□ -1.51
YIPF3-202ENST00000372422 KRTAP19-5Q3LI72 72 aa5.59□□□□□ -1.51
YIPF3-202ENST00000372422 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.52
YIPF3-202ENST00000372422 SPRR2FQ96RM1 72 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms