RNA–Protein interactions for RNA: ENST00000371558.6

UBE2A-202, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBE2A, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-202ENST00000371558 ACYP2P14621 99 aa7.28□□□□□ -1.24
UBE2A-202ENST00000371558 A8MUN3 132 aa7.26□□□□□ -1.25
UBE2A-202ENST00000371558 COA5Q86WW8 74 aa7.26□□□□□ -1.25
UBE2A-202ENST00000371558 CHKB-CPT1BH3BT56 60 aa7.19□□□□□ -1.26
UBE2A-202ENST00000371558 FAT4Q6V0I7 4981 aa7.19□□□□□ -1.26
UBE2A-202ENST00000371558 H1FX-AS1Q4G0G2 97 aa7.17□□□□□ -1.26
UBE2A-202ENST00000371558 FLGP20930 4061 aaPredicted RBP7.17□□□□□ -1.26
UBE2A-202ENST00000371558 KRTAP19-2Q3LHN2 52 aa7.15□□□□□ -1.27
UBE2A-202ENST00000371558 Q1T7F1 81 aa7.14□□□□□ -1.27
UBE2A-202ENST00000371558 S4R3F8 94 aa7.13□□□□□ -1.27
UBE2A-202ENST00000371558 LCA10Q71F78 164 aa7.11□□□□□ -1.27
UBE2A-202ENST00000371558 V9GYY9 64 aa7.08□□□□□ -1.28
UBE2A-202ENST00000371558 LCE2CQ5TA81 110 aa7.03□□□□□ -1.28
UBE2A-202ENST00000371558 SPTSSBQ8NFR3 76 aa7.02□□□□□ -1.28
UBE2A-202ENST00000371558 PRO0628Q9UI54 55 aa7.02□□□□□ -1.28
UBE2A-202ENST00000371558 PSPHP1O15172 72 aa7□□□□□ -1.29
UBE2A-202ENST00000371558 BRK1Q8WUW1 75 aa7□□□□□ -1.29
UBE2A-202ENST00000371558 LCE2BO14633 110 aa6.98□□□□□ -1.29
UBE2A-202ENST00000371558 CSAG1Q6PB30 78 aa6.96□□□□□ -1.3
UBE2A-202ENST00000371558 Q5VV11 94 aa6.93□□□□□ -1.3
UBE2A-202ENST00000371558 PRR15LQ9BU68 103 aa6.92□□□□□ -1.3
UBE2A-202ENST00000371558 MT1HP80294 61 aa6.91□□□□□ -1.3
UBE2A-202ENST00000371558 LINC01558Q9Y6Z2 57 aa6.91□□□□□ -1.3
UBE2A-202ENST00000371558 M0R2T5 61 aa6.87□□□□□ -1.31
UBE2A-202ENST00000371558 SEC61GP60059 68 aa6.87□□□□□ -1.31
UBE2A-202ENST00000371558 A0A1B0GU69 56 aa6.87□□□□□ -1.31
UBE2A-202ENST00000371558 ADM2Q7Z4H4 148 aa6.81□□□□□ -1.32
UBE2A-202ENST00000371558 A6NED7 52 aa6.78□□□□□ -1.32
UBE2A-202ENST00000371558 P0C880 135 aa6.76□□□□□ -1.33
UBE2A-202ENST00000371558 KRTAP10-6P60371 365 aaPredicted RBP6.76□□□□□ -1.33
UBE2A-202ENST00000371558 H0YAA0 97 aa6.75□□□□□ -1.33
UBE2A-202ENST00000371558 A8MU10 97 aa6.72□□□□□ -1.33
UBE2A-202ENST00000371558 CDC42SE1Q9NRR8 79 aa6.71□□□□□ -1.34
UBE2A-202ENST00000371558 LCE2AQ5TA79 106 aaPredicted RBP6.68□□□□□ -1.34
UBE2A-202ENST00000371558 A0A1B0GU33 70 aa6.68□□□□□ -1.34
UBE2A-202ENST00000371558 LORP23490 312 aaPredicted RBP6.64□□□□□ -1.35
UBE2A-202ENST00000371558 KRTAP9-8Q9BYQ0 159 aa6.63□□□□□ -1.35
UBE2A-202ENST00000371558 UQCR11O14957 56 aa6.62□□□□□ -1.35
UBE2A-202ENST00000371558 MT2AP02795 61 aa6.62□□□□□ -1.35
UBE2A-202ENST00000371558 PMAIP1Q13794 54 aa6.61□□□□□ -1.35
UBE2A-202ENST00000371558 SPATA8Q6RVD6 105 aa6.61□□□□□ -1.35
UBE2A-202ENST00000371558 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
UBE2A-202ENST00000371558 MT1FP04733 61 aa6.58□□□□□ -1.36
UBE2A-202ENST00000371558 KRTAP10-10P60014 251 aa6.58□□□□□ -1.36
UBE2A-202ENST00000371558 R4GN34 69 aa6.57□□□□□ -1.36
UBE2A-202ENST00000371558 M0QZ58 72 aa6.56□□□□□ -1.36
UBE2A-202ENST00000371558 MIR22HGQ0VDD5 57 aa6.56□□□□□ -1.36
UBE2A-202ENST00000371558 A6NN06 94 aa6.53□□□□□ -1.36
UBE2A-202ENST00000371558 A0A0D9SG42 100 aa6.49□□□□□ -1.37
UBE2A-202ENST00000371558 CRIPTQ9P021 101 aa6.49□□□□□ -1.37
UBE2A-202ENST00000371558 LINC01554Q52M75 96 aa6.49□□□□□ -1.37
UBE2A-202ENST00000371558 KTN1-AS1Q86SY8 53 aa6.46□□□□□ -1.38
UBE2A-202ENST00000371558 KRTAP4-8Q9BYQ9 185 aa6.45□□□□□ -1.38
UBE2A-202ENST00000371558 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
UBE2A-202ENST00000371558 SPRR2GQ9BYE4 73 aa6.4□□□□□ -1.39
UBE2A-202ENST00000371558 KRTAP9-3Q9BYQ3 159 aa6.39□□□□□ -1.39
UBE2A-202ENST00000371558 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.36□□□□□ -1.39
UBE2A-202ENST00000371558 SPINT4Q6UDR6 99 aa6.34□□□□□ -1.39
UBE2A-202ENST00000371558 KRTAP12-1P59990 96 aa6.32□□□□□ -1.4
UBE2A-202ENST00000371558 KRTAP12-2P59991 146 aa6.32□□□□□ -1.4
UBE2A-202ENST00000371558 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
UBE2A-202ENST00000371558 KRTAP9-6A0A140TA67 174 aa6.3□□□□□ -1.4
UBE2A-202ENST00000371558 USH2AO75445 5202 aa6.27□□□□□ -1.41
UBE2A-202ENST00000371558 K7ERS5 55 aa6.26□□□□□ -1.41
UBE2A-202ENST00000371558 KRTAP19-8Q3LI54 63 aa6.24□□□□□ -1.41
UBE2A-202ENST00000371558 PLAC4Q8WY50 150 aa6.2□□□□□ -1.42
UBE2A-202ENST00000371558 MT1BP07438 61 aa6.19□□□□□ -1.42
UBE2A-202ENST00000371558 PRAC1Q96KF2 57 aa6.17□□□□□ -1.42
UBE2A-202ENST00000371558 CAMK2N1Q7Z7J9 78 aa6.15□□□□□ -1.42
UBE2A-202ENST00000371558 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
UBE2A-202ENST00000371558 FSIP2Q5CZC0 6907 aa6.13□□□□□ -1.43
UBE2A-202ENST00000371558 SSPOA2VEC9 5147 aa6.1□□□□□ -1.43
UBE2A-202ENST00000371558 LCE3BQ5TA77 95 aa6.07□□□□□ -1.44
UBE2A-202ENST00000371558 H3BS24 57 aa6.07□□□□□ -1.44
UBE2A-202ENST00000371558 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
UBE2A-202ENST00000371558 ROMO1P60602 79 aa5.99□□□□□ -1.45
UBE2A-202ENST00000371558 KRTAP9-9Q9BYP9 154 aa5.99□□□□□ -1.45
UBE2A-202ENST00000371558 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
UBE2A-202ENST00000371558 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
UBE2A-202ENST00000371558 MT1XP80297 61 aa5.98□□□□□ -1.45
UBE2A-202ENST00000371558 KRTAP10-5P60370 271 aa5.96□□□□□ -1.45
UBE2A-202ENST00000371558 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
UBE2A-202ENST00000371558 PRO2289Q9P1D8 64 aa5.9□□□□□ -1.46
UBE2A-202ENST00000371558 KRTAP5-3Q6L8H2 238 aa5.89□□□□□ -1.47
UBE2A-202ENST00000371558 KRTAP19-6Q3LI70 58 aa5.85□□□□□ -1.47
UBE2A-202ENST00000371558 FCGBPQ9Y6R7 5405 aaPredicted RBP5.81□□□□□ -1.48
UBE2A-202ENST00000371558 TNP1P09430 55 aa5.81□□□□□ -1.48
UBE2A-202ENST00000371558 KRTAP10-7P60409 375 aaPredicted RBP5.76□□□□□ -1.49
UBE2A-202ENST00000371558 KMT2DO14686 5537 aa5.76□□□□□ -1.49
UBE2A-202ENST00000371558 KRTAP4-12Q9BQ66 201 aa5.74□□□□□ -1.49
UBE2A-202ENST00000371558 KRTAP4-2Q9BYR5 136 aa5.74□□□□□ -1.49
UBE2A-202ENST00000371558 CRCT1Q9UGL9 99 aa5.71□□□□□ -1.5
UBE2A-202ENST00000371558 LCE1DQ5T752 114 aa5.67□□□□□ -1.5
UBE2A-202ENST00000371558 KRTAP10-12P60413 245 aa5.65□□□□□ -1.5
UBE2A-202ENST00000371558 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.5
UBE2A-202ENST00000371558 LCE3AQ5TA76 89 aa5.61□□□□□ -1.51
UBE2A-202ENST00000371558 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
UBE2A-202ENST00000371558 PP632Q6XCG6 107 aa5.54□□□□□ -1.52
UBE2A-202ENST00000371558 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
UBE2A-202ENST00000371558 SYNE2Q8WXH0 6885 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms