RNA–Protein interactions for RNA: ENST00000370128.8

RTCA-203, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCA, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-203ENST00000370128 Q8N1X5 172 aa9.34□□□□□ -0.91
RTCA-203ENST00000370128 KMT2CQ8NEZ4 4911 aaKnown RBP9.33□□□□□ -0.92
RTCA-203ENST00000370128 RYR2Q92736 4967 aa9.29□□□□□ -0.92
RTCA-203ENST00000370128 LUZP6Q538Z0 58 aa9.28□□□□□ -0.92
RTCA-203ENST00000370128 KRTAP3-1Q9BYR8 98 aa9.19□□□□□ -0.94
RTCA-203ENST00000370128 C10orf95Q9H7T3 257 aa9.17□□□□□ -0.94
RTCA-203ENST00000370128 COX6B2Q6YFQ2 88 aa9.15□□□□□ -0.94
RTCA-203ENST00000370128 RYR3Q15413 4870 aa9.11□□□□□ -0.95
RTCA-203ENST00000370128 RPL37P61927 97 aaKnown RBP9.1□□□□□ -0.95
RTCA-203ENST00000370128 TNXBP22105 4242 aa9.1□□□□□ -0.95
RTCA-203ENST00000370128 LRP1Q07954 4544 aaKnown RBP9.09□□□□□ -0.95
RTCA-203ENST00000370128 FAT3Q8TDW7 4589 aa9.07□□□□□ -0.96
RTCA-203ENST00000370128 KRTAP10-8P60410 259 aa9.06□□□□□ -0.96
RTCA-203ENST00000370128 HSPG2P98160 4391 aa9.03□□□□□ -0.96
RTCA-203ENST00000370128 Q5VSD8 79 aa9.02□□□□□ -0.97
RTCA-203ENST00000370128 KRTAP17-1Q9BYP8 105 aa8.91□□□□□ -0.98
RTCA-203ENST00000370128 DMBT1Q9UGM3 2413 aaPredicted RBP8.91□□□□□ -0.98
RTCA-203ENST00000370128 RYR1P21817 5038 aa8.9□□□□□ -0.99
RTCA-203ENST00000370128 SEC61BP60468 96 aaKnown RBP8.89□□□□□ -0.99
RTCA-203ENST00000370128 XP32Q5T750 250 aa8.89□□□□□ -0.99
RTCA-203ENST00000370128 A0A0D9SG42 100 aa8.87□□□□□ -0.99
RTCA-203ENST00000370128 KRTAP13-4Q3LI77 160 aa8.85□□□□□ -0.99
RTCA-203ENST00000370128 MYCBP2O75592 4640 aa8.84□□□□□ -0.99
RTCA-203ENST00000370128 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
RTCA-203ENST00000370128 MT1HL1P0DM35 61 aa8.8□□□□□ -1
RTCA-203ENST00000370128 KRTAP10-6P60371 365 aaPredicted RBP8.79□□□□□ -1
RTCA-203ENST00000370128 EPPK1P58107 5090 aaKnown RBP8.78□□□□□ -1
RTCA-203ENST00000370128 KIAA1109Q2LD37 5005 aa8.77□□□□□ -1.01
RTCA-203ENST00000370128 S4R3F8 94 aa8.76□□□□□ -1.01
RTCA-203ENST00000370128 KRTAP3-2Q9BYR7 98 aa8.71□□□□□ -1.02
RTCA-203ENST00000370128 KRTAP12-2P59991 146 aa8.65□□□□□ -1.02
RTCA-203ENST00000370128 LPAP08519 4548 aa8.61□□□□□ -1.03
RTCA-203ENST00000370128 PLAC4Q8WY50 150 aa8.58□□□□□ -1.04
RTCA-203ENST00000370128 LRP2P98164 4655 aa8.57□□□□□ -1.04
RTCA-203ENST00000370128 KRTAP12-1P59990 96 aa8.53□□□□□ -1.04
RTCA-203ENST00000370128 ABCA13Q86UQ4 5058 aa8.47□□□□□ -1.05
RTCA-203ENST00000370128 KRTAP4-5Q9BYR2 181 aa8.45□□□□□ -1.06
RTCA-203ENST00000370128 CAMK2N1Q7Z7J9 78 aa8.31□□□□□ -1.08
RTCA-203ENST00000370128 BIRC6Q9NR09 4857 aa8.3□□□□□ -1.08
RTCA-203ENST00000370128 M0QZ58 72 aa8.25□□□□□ -1.09
RTCA-203ENST00000370128 HERC2O95714 4834 aa8.23□□□□□ -1.09
RTCA-203ENST00000370128 MUC17Q685J3 4493 aa8.2□□□□□ -1.1
RTCA-203ENST00000370128 KRTAP4-1Q9BYQ7 146 aa8.17□□□□□ -1.1
RTCA-203ENST00000370128 J3QL48 77 aa8.13□□□□□ -1.11
RTCA-203ENST00000370128 PRO2289Q9P1D8 64 aa8.09□□□□□ -1.11
RTCA-203ENST00000370128 R4GN34 69 aa8.06□□□□□ -1.12
RTCA-203ENST00000370128 KRTAP19-2Q3LHN2 52 aa8.04□□□□□ -1.12
RTCA-203ENST00000370128 PCLOQ9Y6V0 5065 aa8.03□□□□□ -1.12
RTCA-203ENST00000370128 LORP23490 312 aaPredicted RBP8.01□□□□□ -1.13
RTCA-203ENST00000370128 PP632Q6XCG6 107 aa7.98□□□□□ -1.13
RTCA-203ENST00000370128 MUC2Q02817 5179 aa7.91□□□□□ -1.14
RTCA-203ENST00000370128 HERC1Q15751 4861 aa7.89□□□□□ -1.15
RTCA-203ENST00000370128 SPRR5A0A1B0GTR4 108 aa7.86□□□□□ -1.15
RTCA-203ENST00000370128 FLGP20930 4061 aaPredicted RBP7.8□□□□□ -1.16
RTCA-203ENST00000370128 LCE2DQ5TA82 110 aaPredicted RBP7.75□□□□□ -1.17
RTCA-203ENST00000370128 INE1O15225 51 aa7.74□□□□□ -1.17
RTCA-203ENST00000370128 HMCN2Q8NDA2 5059 aa7.7□□□□□ -1.18
RTCA-203ENST00000370128 LCE2CQ5TA81 110 aa7.57□□□□□ -1.2
RTCA-203ENST00000370128 FAT4Q6V0I7 4981 aa7.51□□□□□ -1.21
RTCA-203ENST00000370128 KRTAP23-1A1A580 65 aa7.46□□□□□ -1.22
RTCA-203ENST00000370128 UBR4Q5T4S7 5183 aa7.44□□□□□ -1.22
RTCA-203ENST00000370128 SPRR2GQ9BYE4 73 aa7.38□□□□□ -1.23
RTCA-203ENST00000370128 RNF213Q63HN8 5207 aa7.37□□□□□ -1.23
RTCA-203ENST00000370128 MT1HP80294 61 aa7.36□□□□□ -1.23
RTCA-203ENST00000370128 KRTAP19-1Q8IUB9 90 aa7.35□□□□□ -1.23
RTCA-203ENST00000370128 TNP1P09430 55 aa7.35□□□□□ -1.23
RTCA-203ENST00000370128 M0R2T5 61 aa7.34□□□□□ -1.23
RTCA-203ENST00000370128 MT2AP02795 61 aa7.23□□□□□ -1.25
RTCA-203ENST00000370128 MT1FP04733 61 aa7.23□□□□□ -1.25
RTCA-203ENST00000370128 KRTAP10-10P60014 251 aa7.19□□□□□ -1.26
RTCA-203ENST00000370128 KRTAP9-8Q9BYQ0 159 aa7.19□□□□□ -1.26
RTCA-203ENST00000370128 KRTAP19-8Q3LI54 63 aa7.06□□□□□ -1.28
RTCA-203ENST00000370128 LCE3AQ5TA76 89 aa6.99□□□□□ -1.29
RTCA-203ENST00000370128 MT1BP07438 61 aa6.98□□□□□ -1.29
RTCA-203ENST00000370128 KRTAP10-5P60370 271 aa6.92□□□□□ -1.3
RTCA-203ENST00000370128 MT1XP80297 61 aa6.91□□□□□ -1.3
RTCA-203ENST00000370128 KRTAP9-3Q9BYQ3 159 aa6.89□□□□□ -1.31
RTCA-203ENST00000370128 KRTAP8-1Q8IUC2 63 aa6.83□□□□□ -1.32
RTCA-203ENST00000370128 KRTAP10-12P60413 245 aa6.74□□□□□ -1.33
RTCA-203ENST00000370128 KRTAP10-7P60409 375 aaPredicted RBP6.71□□□□□ -1.34
RTCA-203ENST00000370128 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
RTCA-203ENST00000370128 LCE2AQ5TA79 106 aaPredicted RBP6.64□□□□□ -1.35
RTCA-203ENST00000370128 LCE2BO14633 110 aa6.62□□□□□ -1.35
RTCA-203ENST00000370128 USH2AO75445 5202 aa6.51□□□□□ -1.37
RTCA-203ENST00000370128 KRTAP19-5Q3LI72 72 aa6.41□□□□□ -1.38
RTCA-203ENST00000370128 KMT2DO14686 5537 aa6.37□□□□□ -1.39
RTCA-203ENST00000370128 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
RTCA-203ENST00000370128 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
RTCA-203ENST00000370128 LCE3CQ5T5A8 94 aa6.27□□□□□ -1.41
RTCA-203ENST00000370128 KRTAP2-3P0C7H8 128 aa6.18□□□□□ -1.42
RTCA-203ENST00000370128 KRTAP2-4Q9BYR9 128 aa6.18□□□□□ -1.42
RTCA-203ENST00000370128 KRTAP2-1Q9BYU5 128 aa6.18□□□□□ -1.42
RTCA-203ENST00000370128 KRTAP19-7Q3SYF9 63 aa6.17□□□□□ -1.42
RTCA-203ENST00000370128 FSIP2Q5CZC0 6907 aa6.13□□□□□ -1.43
RTCA-203ENST00000370128 SSPOA2VEC9 5147 aa6.08□□□□□ -1.44
RTCA-203ENST00000370128 KRTAP9-6A8MVA2 160 aa6.06□□□□□ -1.44
RTCA-203ENST00000370128 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
RTCA-203ENST00000370128 MT1EP04732 61 aa5.98□□□□□ -1.45
RTCA-203ENST00000370128 MT1LQ93083 61 aa5.97□□□□□ -1.45
RTCA-203ENST00000370128 KRTAP19-6Q3LI70 58 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms