RNA–Protein interactions for RNA: ENST00000369968.6

CLCC1-204, Transcript of chloride channel CLIC like 1, humanhuman

TSL 5 BASIC

Gene CLCC1, Length 4,151 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-204ENST00000369968 K7ERS5 55 aa3.46□□□□□ -1.86
CLCC1-204ENST00000369968 LORP23490 312 aaPredicted RBP3.45□□□□□ -1.86
CLCC1-204ENST00000369968 LRP1Q07954 4544 aaKnown RBP3.43□□□□□ -1.86
CLCC1-204ENST00000369968 Q8N1X5 172 aa3.42□□□□□ -1.86
CLCC1-204ENST00000369968 CRIPTQ9P021 101 aa3.41□□□□□ -1.86
CLCC1-204ENST00000369968 DYNC1H1Q14204 4646 aaKnown RBP3.41□□□□□ -1.86
CLCC1-204ENST00000369968 LPAP08519 4548 aa3.4□□□□□ -1.86
CLCC1-204ENST00000369968 KRTAP13-4Q3LI77 160 aa3.39□□□□□ -1.87
CLCC1-204ENST00000369968 KRTAP13-2Q52LG2 175 aa3.39□□□□□ -1.87
CLCC1-204ENST00000369968 RPS29P62273 56 aaKnown RBP3.37□□□□□ -1.87
CLCC1-204ENST00000369968 KRTAP10-6P60371 365 aaPredicted RBP3.35□□□□□ -1.87
CLCC1-204ENST00000369968 H1FX-AS1Q4G0G2 97 aa3.35□□□□□ -1.87
CLCC1-204ENST00000369968 FAT3Q8TDW7 4589 aa3.34□□□□□ -1.87
CLCC1-204ENST00000369968 C20orf166-AS1Q96NR2 134 aa3.33□□□□□ -1.88
CLCC1-204ENST00000369968 KRTAP1-4P0C5Y4 121 aa3.32□□□□□ -1.88
CLCC1-204ENST00000369968 C10orf95Q9H7T3 257 aa3.32□□□□□ -1.88
CLCC1-204ENST00000369968 NDUFAF8A1L188 74 aa3.31□□□□□ -1.88
CLCC1-204ENST00000369968 A0A1B0GVY2 172 aa3.3□□□□□ -1.88
CLCC1-204ENST00000369968 M0R2T5 61 aa3.3□□□□□ -1.88
CLCC1-204ENST00000369968 A0A1B0GU33 70 aa3.3□□□□□ -1.88
CLCC1-204ENST00000369968 LOC100996750A0A140TA64 210 aa3.29□□□□□ -1.88
CLCC1-204ENST00000369968 KRTAP4-6Q9BYQ5 205 aa3.29□□□□□ -1.88
CLCC1-204ENST00000369968 FAT1Q14517 4588 aa3.26□□□□□ -1.89
CLCC1-204ENST00000369968 KRTAP12-2P59991 146 aa3.23□□□□□ -1.89
CLCC1-204ENST00000369968 XP32Q5T750 250 aa3.23□□□□□ -1.89
CLCC1-204ENST00000369968 S4R3F8 94 aa3.23□□□□□ -1.89
CLCC1-204ENST00000369968 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
CLCC1-204ENST00000369968 RPL37P61927 97 aaKnown RBP3.22□□□□□ -1.89
CLCC1-204ENST00000369968 DNHD1Q96M86 4753 aa3.2□□□□□ -1.9
CLCC1-204ENST00000369968 KRTAP10-8P60410 259 aa3.19□□□□□ -1.9
CLCC1-204ENST00000369968 KMT2CQ8NEZ4 4911 aaKnown RBP3.18□□□□□ -1.9
CLCC1-204ENST00000369968 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
CLCC1-204ENST00000369968 A0A0D9SG42 100 aa3.15□□□□□ -1.9
CLCC1-204ENST00000369968 SPINT4Q6UDR6 99 aa3.15□□□□□ -1.9
CLCC1-204ENST00000369968 R4GN34 69 aa3.14□□□□□ -1.91
CLCC1-204ENST00000369968 CAMK2N1Q7Z7J9 78 aa3.12□□□□□ -1.91
CLCC1-204ENST00000369968 MUC17Q685J3 4493 aa3.1□□□□□ -1.91
CLCC1-204ENST00000369968 LRP2P98164 4655 aa3.09□□□□□ -1.91
CLCC1-204ENST00000369968 KRTAP10-4P60372 401 aaPredicted RBP3.09□□□□□ -1.91
CLCC1-204ENST00000369968 M0QZ58 72 aa3.07□□□□□ -1.92
CLCC1-204ENST00000369968 FLGP20930 4061 aaPredicted RBP3.07□□□□□ -1.92
CLCC1-204ENST00000369968 KRTAP23-1A1A580 65 aa3.06□□□□□ -1.92
CLCC1-204ENST00000369968 RYR1P21817 5038 aa3.06□□□□□ -1.92
CLCC1-204ENST00000369968 ABCA13Q86UQ4 5058 aa3.03□□□□□ -1.92
CLCC1-204ENST00000369968 MT1HL1P0DM35 61 aa3.02□□□□□ -1.93
CLCC1-204ENST00000369968 PLAC4Q8WY50 150 aa3.01□□□□□ -1.93
CLCC1-204ENST00000369968 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
CLCC1-204ENST00000369968 RYR2Q92736 4967 aa2.99□□□□□ -1.93
CLCC1-204ENST00000369968 KRTAP4-5Q9BYR2 181 aa2.99□□□□□ -1.93
CLCC1-204ENST00000369968 KRTAP4-8Q9BYQ9 185 aa2.93□□□□□ -1.94
CLCC1-204ENST00000369968 KRTAP10-10P60014 251 aa2.92□□□□□ -1.94
CLCC1-204ENST00000369968 PCLOQ9Y6V0 5065 aa2.91□□□□□ -1.94
CLCC1-204ENST00000369968 KRTAP17-1Q9BYP8 105 aa2.9□□□□□ -1.94
CLCC1-204ENST00000369968 RYR3Q15413 4870 aa2.86□□□□□ -1.95
CLCC1-204ENST00000369968 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.86□□□□□ -1.95
CLCC1-204ENST00000369968 MUC2Q02817 5179 aa2.85□□□□□ -1.95
CLCC1-204ENST00000369968 KRTAP19-2Q3LHN2 52 aa2.84□□□□□ -1.95
CLCC1-204ENST00000369968 KRTAP9-2Q9BYQ4 174 aa2.84□□□□□ -1.95
CLCC1-204ENST00000369968 KIAA1109Q2LD37 5005 aa2.83□□□□□ -1.96
CLCC1-204ENST00000369968 TNP1P09430 55 aa2.81□□□□□ -1.96
CLCC1-204ENST00000369968 KRTAP9-6A0A140TA67 174 aa2.81□□□□□ -1.96
CLCC1-204ENST00000369968 HERC1Q15751 4861 aa2.79□□□□□ -1.96
CLCC1-204ENST00000369968 PRO2289Q9P1D8 64 aa2.79□□□□□ -1.96
CLCC1-204ENST00000369968 KRTAP4-12Q9BQ66 201 aa2.77□□□□□ -1.97
CLCC1-204ENST00000369968 KRTAP19-4Q3LI73 84 aa2.77□□□□□ -1.97
CLCC1-204ENST00000369968 LCE3BQ5TA77 95 aa2.77□□□□□ -1.97
CLCC1-204ENST00000369968 EPPK1P58107 5090 aaKnown RBP2.72□□□□□ -1.97
CLCC1-204ENST00000369968 LCE4AQ5TA78 99 aa2.72□□□□□ -1.97
CLCC1-204ENST00000369968 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
CLCC1-204ENST00000369968 KRTAP9-4Q9BYQ2 154 aa2.72□□□□□ -1.97
CLCC1-204ENST00000369968 UBR4Q5T4S7 5183 aa2.71□□□□□ -1.98
CLCC1-204ENST00000369968 PP632Q6XCG6 107 aa2.71□□□□□ -1.98
CLCC1-204ENST00000369968 KRTAP4-1Q9BYQ7 146 aa2.71□□□□□ -1.98
CLCC1-204ENST00000369968 KRTAP4-8A0A0G2JLE6 195 aa2.7□□□□□ -1.98
CLCC1-204ENST00000369968 BIRC6Q9NR09 4857 aa2.69□□□□□ -1.98
CLCC1-204ENST00000369968 HERC2O95714 4834 aa2.68□□□□□ -1.98
CLCC1-204ENST00000369968 KRTAP19-1Q8IUB9 90 aa2.65□□□□□ -1.98
CLCC1-204ENST00000369968 FAT4Q6V0I7 4981 aa2.64□□□□□ -1.99
CLCC1-204ENST00000369968 KRTAP4-7Q9BYR0 210 aa2.64□□□□□ -1.99
CLCC1-204ENST00000369968 KRTAP10-12P60413 245 aa2.6□□□□□ -1.99
CLCC1-204ENST00000369968 HMCN2Q8NDA2 5059 aa2.6□□□□□ -1.99
CLCC1-204ENST00000369968 KRTAP9-7A8MTY7 169 aa2.59□□□□□ -1.99
CLCC1-204ENST00000369968 MT1HP80294 61 aa2.58□□□□□ -2
CLCC1-204ENST00000369968 INE1O15225 51 aa2.57□□□□□ -2
CLCC1-204ENST00000369968 RNF213Q63HN8 5207 aa2.56□□□□□ -2
CLCC1-204ENST00000369968 KRTAP4-9Q9BYQ8 210 aa2.55□□□□□ -2
CLCC1-204ENST00000369968 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
CLCC1-204ENST00000369968 LCE3AQ5TA76 89 aa2.54□□□□□ -2
CLCC1-204ENST00000369968 LCE1DQ5T752 114 aa2.53□□□□□ -2.01
CLCC1-204ENST00000369968 MT2AP02795 61 aa2.51□□□□□ -2.01
CLCC1-204ENST00000369968 KRTAP8-1Q8IUC2 63 aa2.5□□□□□ -2.01
CLCC1-204ENST00000369968 KRTAP10-5P60370 271 aa2.47□□□□□ -2.01
CLCC1-204ENST00000369968 SPRR2GQ9BYE4 73 aa2.47□□□□□ -2.01
CLCC1-204ENST00000369968 MT1FP04733 61 aa2.46□□□□□ -2.02
CLCC1-204ENST00000369968 KRTAP9-6A8MVA2 160 aa2.45□□□□□ -2.02
CLCC1-204ENST00000369968 KMT2DO14686 5537 aa2.43□□□□□ -2.02
CLCC1-204ENST00000369968 KRTAP4-11Q9BYQ6 195 aa2.4□□□□□ -2.03
CLCC1-204ENST00000369968 KRTAP9-3Q9BYQ3 159 aa2.39□□□□□ -2.03
CLCC1-204ENST00000369968 MT1XP80297 61 aa2.39□□□□□ -2.03
CLCC1-204ENST00000369968 KRTAP2-3P0C7H8 128 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms