RNA–Protein interactions for RNA: ENST00000369487.3

CD58-201, Transcript of CD58 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD58, Length 892 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-201ENST00000369487 FAM236AA0A1B0GUQ0 79 aa9.66□□□□□ -0.86
CD58-201ENST00000369487 FAM236BA0A1B0GV22 79 aa9.66□□□□□ -0.86
CD58-201ENST00000369487 LCE2BO14633 110 aa9.66□□□□□ -0.86
CD58-201ENST00000369487 SMIM20Q8N5G0 67 aa9.66□□□□□ -0.86
CD58-201ENST00000369487 TRAV7A0A075B6U4 112 aa9.6□□□□□ -0.87
CD58-201ENST00000369487 NDUFC1O43677 76 aa9.56□□□□□ -0.88
CD58-201ENST00000369487 SSPOA2VEC9 5147 aa9.56□□□□□ -0.88
CD58-201ENST00000369487 DMAC1Q96GE9 116 aa9.48□□□□□ -0.89
CD58-201ENST00000369487 H0YAA0 97 aa9.41□□□□□ -0.9
CD58-201ENST00000369487 KRTAP19-1Q8IUB9 90 aa9.39□□□□□ -0.91
CD58-201ENST00000369487 SERP2Q8N6R1 65 aa9.37□□□□□ -0.91
CD58-201ENST00000369487 SPRR2GQ9BYE4 73 aa9.35□□□□□ -0.91
CD58-201ENST00000369487 CRIPTQ9P021 101 aa9.35□□□□□ -0.91
CD58-201ENST00000369487 SNURFQ9Y675 71 aa9.34□□□□□ -0.91
CD58-201ENST00000369487 FCGBPQ9Y6R7 5405 aaPredicted RBP9.32□□□□□ -0.92
CD58-201ENST00000369487 ACYP2P14621 99 aa9.31□□□□□ -0.92
CD58-201ENST00000369487 KRTAP19-6Q3LI70 58 aa9.31□□□□□ -0.92
CD58-201ENST00000369487 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.3□□□□□ -0.92
CD58-201ENST00000369487 C20orf197Q8N268 126 aa9.3□□□□□ -0.92
CD58-201ENST00000369487 ADM2Q7Z4H4 148 aa9.28□□□□□ -0.92
CD58-201ENST00000369487 KRTAP19-8Q3LI54 63 aa9.24□□□□□ -0.93
CD58-201ENST00000369487 Q5VV11 94 aa9.24□□□□□ -0.93
CD58-201ENST00000369487 SPANXA2-OT1Q8N9U9 137 aa9.23□□□□□ -0.93
CD58-201ENST00000369487 KRTAP9-7A8MTY7 169 aa9.22□□□□□ -0.93
CD58-201ENST00000369487 MT1BP07438 61 aa9.18□□□□□ -0.94
CD58-201ENST00000369487 SPTSSBQ8NFR3 76 aa9.18□□□□□ -0.94
CD58-201ENST00000369487 CHKB-CPT1BH3BT56 60 aa9.16□□□□□ -0.94
CD58-201ENST00000369487 COX7CP15954 63 aa9.16□□□□□ -0.94
CD58-201ENST00000369487 P0C880 135 aa9.08□□□□□ -0.96
CD58-201ENST00000369487 MACF1Q9UPN3 7388 aaKnown RBP9.05□□□□□ -0.96
CD58-201ENST00000369487 R4GN34 69 aa9.05□□□□□ -0.96
CD58-201ENST00000369487 A6NN06 94 aa9□□□□□ -0.97
CD58-201ENST00000369487 ANAPC13Q9BS18 74 aa8.99□□□□□ -0.97
CD58-201ENST00000369487 M0QZ58 72 aa8.97□□□□□ -0.97
CD58-201ENST00000369487 H7BZZ5 65 aa8.95□□□□□ -0.98
CD58-201ENST00000369487 KRTAP10-5P60370 271 aa8.93□□□□□ -0.98
CD58-201ENST00000369487 COA5Q86WW8 74 aa8.93□□□□□ -0.98
CD58-201ENST00000369487 CYSTM1Q9H1C7 97 aa8.92□□□□□ -0.98
CD58-201ENST00000369487 SYNE2Q8WXH0 6885 aaKnown RBP8.91□□□□□ -0.98
CD58-201ENST00000369487 PLAC4Q8WY50 150 aa8.87□□□□□ -0.99
CD58-201ENST00000369487 LINC01554Q52M75 96 aa8.82□□□□□ -1
CD58-201ENST00000369487 CCDC179H3BU77 68 aa8.77□□□□□ -1.01
CD58-201ENST00000369487 PRO2289Q9P1D8 64 aa8.77□□□□□ -1.01
CD58-201ENST00000369487 SEC61GP60059 68 aa8.71□□□□□ -1.02
CD58-201ENST00000369487 MT1XP80297 61 aa8.68□□□□□ -1.02
CD58-201ENST00000369487 SERP1Q9Y6X1 66 aa8.68□□□□□ -1.02
CD58-201ENST00000369487 ATP5EP56381 51 aaPredicted RBP8.66□□□□□ -1.02
CD58-201ENST00000369487 KRTAP6-3Q3LI67 103 aa8.66□□□□□ -1.02
CD58-201ENST00000369487 KRTAP13-4Q3LI77 160 aa8.59□□□□□ -1.03
CD58-201ENST00000369487 TMEM258P61165 79 aa8.51□□□□□ -1.05
CD58-201ENST00000369487 A0A1B0GU33 70 aa8.5□□□□□ -1.05
CD58-201ENST00000369487 A0A1B0GU69 56 aa8.49□□□□□ -1.05
CD58-201ENST00000369487 KRTAP12-2P59991 146 aa8.46□□□□□ -1.06
CD58-201ENST00000369487 SPATA8Q6RVD6 105 aa8.41□□□□□ -1.06
CD58-201ENST00000369487 NEBP20929 6669 aa8.4□□□□□ -1.07
CD58-201ENST00000369487 KMT2DO14686 5537 aa8.38□□□□□ -1.07
CD58-201ENST00000369487 A0A0D9SG42 100 aa8.38□□□□□ -1.07
CD58-201ENST00000369487 KRTAP5-9P26371 169 aa8.38□□□□□ -1.07
CD58-201ENST00000369487 CAMK2N1Q7Z7J9 78 aa8.37□□□□□ -1.07
CD58-201ENST00000369487 MUC12Q9UKN1 5478 aa8.35□□□□□ -1.07
CD58-201ENST00000369487 PRR15LQ9BU68 103 aa8.35□□□□□ -1.07
CD58-201ENST00000369487 SMIM26A0A096LP01 95 aa8.29□□□□□ -1.08
CD58-201ENST00000369487 LINC01558Q9Y6Z2 57 aa8.29□□□□□ -1.08
CD58-201ENST00000369487 KRTAP10-7P60409 375 aaPredicted RBP8.28□□□□□ -1.08
CD58-201ENST00000369487 KRTAP10-12P60413 245 aa8.27□□□□□ -1.09
CD58-201ENST00000369487 KRTAP8-1Q8IUC2 63 aa8.27□□□□□ -1.09
CD58-201ENST00000369487 SPINT4Q6UDR6 99 aa8.26□□□□□ -1.09
CD58-201ENST00000369487 KRTAP12-1P59990 96 aa8.22□□□□□ -1.09
CD58-201ENST00000369487 MDN1Q9NU22 5596 aa8.2□□□□□ -1.1
CD58-201ENST00000369487 SPRR2FQ96RM1 72 aa8.2□□□□□ -1.1
CD58-201ENST00000369487 KRTAP4-8A0A0G2JLE6 195 aa8.18□□□□□ -1.1
CD58-201ENST00000369487 KRTAP4-8Q9BYQ9 185 aa8.18□□□□□ -1.1
CD58-201ENST00000369487 A8MU10 97 aa8.15□□□□□ -1.1
CD58-201ENST00000369487 UQCR11O14957 56 aa8.06□□□□□ -1.12
CD58-201ENST00000369487 KRTAP20-1Q3LI63 56 aa8.06□□□□□ -1.12
CD58-201ENST00000369487 V9GYY9 64 aa8.02□□□□□ -1.13
CD58-201ENST00000369487 SPRR2EP22531 72 aa8.01□□□□□ -1.13
CD58-201ENST00000369487 SPRR2BP35325 72 aa8.01□□□□□ -1.13
CD58-201ENST00000369487 SPRR2AP35326 72 aa8.01□□□□□ -1.13
CD58-201ENST00000369487 LOC100996750A0A140TA64 210 aa7.98□□□□□ -1.13
CD58-201ENST00000369487 KRTAP4-6Q9BYQ5 205 aa7.98□□□□□ -1.13
CD58-201ENST00000369487 Q1T7F1 81 aa7.94□□□□□ -1.14
CD58-201ENST00000369487 PCP4P48539 62 aa7.93□□□□□ -1.14
CD58-201ENST00000369487 LCE1AQ5T7P2 110 aa7.93□□□□□ -1.14
CD58-201ENST00000369487 MIR22HGQ0VDD5 57 aa7.88□□□□□ -1.15
CD58-201ENST00000369487 PSPHP1O15172 72 aa7.87□□□□□ -1.15
CD58-201ENST00000369487 KRTAP2-3P0C7H8 128 aa7.82□□□□□ -1.16
CD58-201ENST00000369487 KRTAP2-4Q9BYR9 128 aa7.82□□□□□ -1.16
CD58-201ENST00000369487 C10orf95Q9H7T3 257 aa7.82□□□□□ -1.16
CD58-201ENST00000369487 TNP1P09430 55 aa7.8□□□□□ -1.16
CD58-201ENST00000369487 RPS28P62857 69 aaKnown RBP7.79□□□□□ -1.16
CD58-201ENST00000369487 KRTAP19-7Q3SYF9 63 aa7.75□□□□□ -1.17
CD58-201ENST00000369487 SPRR2DP22532 72 aa7.74□□□□□ -1.17
CD58-201ENST00000369487 K7ERS5 55 aa7.73□□□□□ -1.17
CD58-201ENST00000369487 MT1EP04732 61 aa7.68□□□□□ -1.18
CD58-201ENST00000369487 A6NED7 52 aa7.66□□□□□ -1.18
CD58-201ENST00000369487 KRTAP19-5Q3LI72 72 aa7.64□□□□□ -1.19
CD58-201ENST00000369487 LCE3AQ5TA76 89 aa7.61□□□□□ -1.19
CD58-201ENST00000369487 KRTAP19-3Q7Z4W3 81 aa7.57□□□□□ -1.2
CD58-201ENST00000369487 KRTAP2-2Q9BYT5 123 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms