RNA–Protein interactions for RNA: ENST00000369023.7

NSMCE4A-202, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE4A, Length 1,394 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-202ENST00000369023 LCE2DQ5TA82 110 aaPredicted RBP11.52□□□□□ -0.57
NSMCE4A-202ENST00000369023 CCDC179H3BU77 68 aa11.48□□□□□ -0.57
NSMCE4A-202ENST00000369023 NDUFC1O43677 76 aa11.48□□□□□ -0.57
NSMCE4A-202ENST00000369023 KRTAP10-10P60014 251 aa11.47□□□□□ -0.57
NSMCE4A-202ENST00000369023 KRTAP9-2Q9BYQ4 174 aa11.47□□□□□ -0.57
NSMCE4A-202ENST00000369023 KRTAP3-3Q9BYR6 98 aa11.46□□□□□ -0.57
NSMCE4A-202ENST00000369023 MT1FP04733 61 aa11.43□□□□□ -0.58
NSMCE4A-202ENST00000369023 SPANXA2-OT1Q8N9U9 137 aa11.41□□□□□ -0.58
NSMCE4A-202ENST00000369023 ACYP2P14621 99 aa11.41□□□□□ -0.58
NSMCE4A-202ENST00000369023 CYSTM1Q9H1C7 97 aa11.37□□□□□ -0.59
NSMCE4A-202ENST00000369023 H7BZZ5 65 aa11.28□□□□□ -0.6
NSMCE4A-202ENST00000369023 KRTAP9-3Q9BYQ3 159 aa11.26□□□□□ -0.61
NSMCE4A-202ENST00000369023 H0YAA0 97 aa11.21□□□□□ -0.61
NSMCE4A-202ENST00000369023 CHKB-CPT1BH3BT56 60 aa11.21□□□□□ -0.61
NSMCE4A-202ENST00000369023 SPTSSBQ8NFR3 76 aa11.2□□□□□ -0.62
NSMCE4A-202ENST00000369023 TMEM258P61165 79 aa11.1□□□□□ -0.63
NSMCE4A-202ENST00000369023 ADM2Q7Z4H4 148 aa11.07□□□□□ -0.64
NSMCE4A-202ENST00000369023 CRIPTQ9P021 101 aa11.05□□□□□ -0.64
NSMCE4A-202ENST00000369023 LCE2BO14633 110 aa11.04□□□□□ -0.64
NSMCE4A-202ENST00000369023 COA5Q86WW8 74 aa11.03□□□□□ -0.64
NSMCE4A-202ENST00000369023 ATP5EP56381 51 aaPredicted RBP11.02□□□□□ -0.65
NSMCE4A-202ENST00000369023 CRCT1Q9UGL9 99 aa10.96□□□□□ -0.65
NSMCE4A-202ENST00000369023 KRTAP19-1Q8IUB9 90 aa10.94□□□□□ -0.66
NSMCE4A-202ENST00000369023 SPRR2GQ9BYE4 73 aa10.94□□□□□ -0.66
NSMCE4A-202ENST00000369023 FSIP2Q5CZC0 6907 aa10.94□□□□□ -0.66
NSMCE4A-202ENST00000369023 USH2AO75445 5202 aa10.92□□□□□ -0.66
NSMCE4A-202ENST00000369023 KRTAP9-6A0A140TA67 174 aa10.9□□□□□ -0.66
NSMCE4A-202ENST00000369023 P0C880 135 aa10.86□□□□□ -0.67
NSMCE4A-202ENST00000369023 KRTAP3-2Q9BYR7 98 aa10.85□□□□□ -0.67
NSMCE4A-202ENST00000369023 R4GN34 69 aa10.78□□□□□ -0.68
NSMCE4A-202ENST00000369023 KRTAP19-8Q3LI54 63 aa10.77□□□□□ -0.69
NSMCE4A-202ENST00000369023 Q5VV11 94 aa10.77□□□□□ -0.69
NSMCE4A-202ENST00000369023 SERP1Q9Y6X1 66 aa10.75□□□□□ -0.69
NSMCE4A-202ENST00000369023 M0QZ58 72 aa10.7□□□□□ -0.7
NSMCE4A-202ENST00000369023 SEC61GP60059 68 aa10.7□□□□□ -0.7
NSMCE4A-202ENST00000369023 SSPOA2VEC9 5147 aa10.69□□□□□ -0.7
NSMCE4A-202ENST00000369023 RPS28P62857 69 aaKnown RBP10.67□□□□□ -0.7
NSMCE4A-202ENST00000369023 MT1BP07438 61 aa10.65□□□□□ -0.7
NSMCE4A-202ENST00000369023 KRTAP19-6Q3LI70 58 aa10.62□□□□□ -0.71
NSMCE4A-202ENST00000369023 LINC01554Q52M75 96 aa10.51□□□□□ -0.73
NSMCE4A-202ENST00000369023 A0A1B0GU69 56 aa10.49□□□□□ -0.73
NSMCE4A-202ENST00000369023 PLAC4Q8WY50 150 aa10.47□□□□□ -0.73
NSMCE4A-202ENST00000369023 SMIM26A0A096LP01 95 aa10.42□□□□□ -0.74
NSMCE4A-202ENST00000369023 A0A1B0GU33 70 aa10.4□□□□□ -0.74
NSMCE4A-202ENST00000369023 FCGBPQ9Y6R7 5405 aaPredicted RBP10.4□□□□□ -0.75
NSMCE4A-202ENST00000369023 A6NN06 94 aa10.39□□□□□ -0.75
NSMCE4A-202ENST00000369023 PRR15LQ9BU68 103 aa10.39□□□□□ -0.75
NSMCE4A-202ENST00000369023 LINC01558Q9Y6Z2 57 aa10.36□□□□□ -0.75
NSMCE4A-202ENST00000369023 KRTAP13-4Q3LI77 160 aa10.35□□□□□ -0.75
NSMCE4A-202ENST00000369023 KRTAP10-5P60370 271 aa10.32□□□□□ -0.76
NSMCE4A-202ENST00000369023 Q1T7F1 81 aa10.31□□□□□ -0.76
NSMCE4A-202ENST00000369023 V9GYY9 64 aa10.26□□□□□ -0.77
NSMCE4A-202ENST00000369023 PRO2289Q9P1D8 64 aa10.26□□□□□ -0.77
NSMCE4A-202ENST00000369023 SPATA8Q6RVD6 105 aa10.23□□□□□ -0.77
NSMCE4A-202ENST00000369023 A0A0D9SG42 100 aa10.15□□□□□ -0.78
NSMCE4A-202ENST00000369023 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.15□□□□□ -0.78
NSMCE4A-202ENST00000369023 MT1XP80297 61 aa10.14□□□□□ -0.79
NSMCE4A-202ENST00000369023 UQCR11O14957 56 aa10.03□□□□□ -0.8
NSMCE4A-202ENST00000369023 PSPHP1O15172 72 aa10.02□□□□□ -0.8
NSMCE4A-202ENST00000369023 CAMK2N1Q7Z7J9 78 aa10.02□□□□□ -0.8
NSMCE4A-202ENST00000369023 SPINT4Q6UDR6 99 aa10□□□□□ -0.81
NSMCE4A-202ENST00000369023 MACF1Q9UPN3 7388 aaKnown RBP9.96□□□□□ -0.82
NSMCE4A-202ENST00000369023 A8MU10 97 aa9.95□□□□□ -0.82
NSMCE4A-202ENST00000369023 KRTAP12-1P59990 96 aa9.95□□□□□ -0.82
NSMCE4A-202ENST00000369023 KRTAP9-7A8MTY7 169 aa9.88□□□□□ -0.83
NSMCE4A-202ENST00000369023 KRTAP12-2P59991 146 aa9.88□□□□□ -0.83
NSMCE4A-202ENST00000369023 MIR22HGQ0VDD5 57 aa9.83□□□□□ -0.84
NSMCE4A-202ENST00000369023 SYNE2Q8WXH0 6885 aaKnown RBP9.75□□□□□ -0.85
NSMCE4A-202ENST00000369023 KRTAP6-3Q3LI67 103 aa9.73□□□□□ -0.85
NSMCE4A-202ENST00000369023 A6NED7 52 aa9.72□□□□□ -0.85
NSMCE4A-202ENST00000369023 KRTAP10-7P60409 375 aaPredicted RBP9.67□□□□□ -0.86
NSMCE4A-202ENST00000369023 KRTAP10-12P60413 245 aa9.65□□□□□ -0.86
NSMCE4A-202ENST00000369023 K7ERS5 55 aa9.62□□□□□ -0.87
NSMCE4A-202ENST00000369023 CDC42SE1Q9NRR8 79 aa9.61□□□□□ -0.87
NSMCE4A-202ENST00000369023 KRTAP8-1Q8IUC2 63 aa9.54□□□□□ -0.88
NSMCE4A-202ENST00000369023 KRTAP5-9P26371 169 aa9.5□□□□□ -0.89
NSMCE4A-202ENST00000369023 KMT2DO14686 5537 aa9.49□□□□□ -0.89
NSMCE4A-202ENST00000369023 KRTAP4-8A0A0G2JLE6 195 aa9.49□□□□□ -0.89
NSMCE4A-202ENST00000369023 KRTAP4-8Q9BYQ9 185 aa9.49□□□□□ -0.89
NSMCE4A-202ENST00000369023 BRK1Q8WUW1 75 aa9.45□□□□□ -0.9
NSMCE4A-202ENST00000369023 C10orf95Q9H7T3 257 aa9.45□□□□□ -0.9
NSMCE4A-202ENST00000369023 TNP1P09430 55 aa9.39□□□□□ -0.91
NSMCE4A-202ENST00000369023 SPRR2FQ96RM1 72 aa9.37□□□□□ -0.91
NSMCE4A-202ENST00000369023 MUC12Q9UKN1 5478 aa9.25□□□□□ -0.93
NSMCE4A-202ENST00000369023 PRO0628Q9UI54 55 aa9.22□□□□□ -0.93
NSMCE4A-202ENST00000369023 KRTAP25-1Q3LHN0 102 aa9.16□□□□□ -0.94
NSMCE4A-202ENST00000369023 NEBP20929 6669 aa9.14□□□□□ -0.95
NSMCE4A-202ENST00000369023 SPRR2EP22531 72 aa9.1□□□□□ -0.95
NSMCE4A-202ENST00000369023 SPRR2BP35325 72 aa9.1□□□□□ -0.95
NSMCE4A-202ENST00000369023 SPRR2AP35326 72 aa9.1□□□□□ -0.95
NSMCE4A-202ENST00000369023 MDN1Q9NU22 5596 aa9.08□□□□□ -0.96
NSMCE4A-202ENST00000369023 LCE3AQ5TA76 89 aa9.07□□□□□ -0.96
NSMCE4A-202ENST00000369023 KRTAP19-7Q3SYF9 63 aa9.04□□□□□ -0.96
NSMCE4A-202ENST00000369023 LCE1AQ5T7P2 110 aa9.02□□□□□ -0.97
NSMCE4A-202ENST00000369023 ROMO1P60602 79 aa9□□□□□ -0.97
NSMCE4A-202ENST00000369023 KRTAP19-5Q3LI72 72 aa8.99□□□□□ -0.97
NSMCE4A-202ENST00000369023 MT1EP04732 61 aa8.96□□□□□ -0.98
NSMCE4A-202ENST00000369023 PMAIP1Q13794 54 aa8.94□□□□□ -0.98
NSMCE4A-202ENST00000369023 KRTAP23-1A1A580 65 aa8.86□□□□□ -0.99
NSMCE4A-202ENST00000369023 SPRR2DP22532 72 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms