RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 KRTAP19-2Q3LHN2 52 aa6.15□□□□□ -1.42
TUBE1-202ENST00000368662 FLGP20930 4061 aaPredicted RBP6.12□□□□□ -1.43
TUBE1-202ENST00000368662 S4R3F8 94 aa6.08□□□□□ -1.44
TUBE1-202ENST00000368662 FAT4Q6V0I7 4981 aa6.08□□□□□ -1.44
TUBE1-202ENST00000368662 CHKB-CPT1BH3BT56 60 aa6.08□□□□□ -1.44
TUBE1-202ENST00000368662 COA5Q86WW8 74 aa6.08□□□□□ -1.44
TUBE1-202ENST00000368662 LCE2CQ5TA81 110 aa6.07□□□□□ -1.44
TUBE1-202ENST00000368662 LCA10Q71F78 164 aa6.04□□□□□ -1.44
TUBE1-202ENST00000368662 SERP1Q9Y6X1 66 aa6.04□□□□□ -1.44
TUBE1-202ENST00000368662 SPTSSBQ8NFR3 76 aa6.02□□□□□ -1.45
TUBE1-202ENST00000368662 CSAG1Q6PB30 78 aa5.99□□□□□ -1.45
TUBE1-202ENST00000368662 MT1HP80294 61 aa5.98□□□□□ -1.45
TUBE1-202ENST00000368662 RPS28P62857 69 aaKnown RBP5.96□□□□□ -1.45
TUBE1-202ENST00000368662 M0R2T5 61 aa5.95□□□□□ -1.46
TUBE1-202ENST00000368662 LCE2AQ5TA79 106 aaPredicted RBP5.88□□□□□ -1.47
TUBE1-202ENST00000368662 SMIM26A0A096LP01 95 aa5.86□□□□□ -1.47
TUBE1-202ENST00000368662 H0YAA0 97 aa5.85□□□□□ -1.47
TUBE1-202ENST00000368662 SEC61GP60059 68 aa5.82□□□□□ -1.48
TUBE1-202ENST00000368662 V9GYY9 64 aa5.82□□□□□ -1.48
TUBE1-202ENST00000368662 LINC01558Q9Y6Z2 57 aa5.8□□□□□ -1.48
TUBE1-202ENST00000368662 KRTAP10-6P60371 365 aaPredicted RBP5.79□□□□□ -1.48
TUBE1-202ENST00000368662 Q1T7F1 81 aa5.79□□□□□ -1.48
TUBE1-202ENST00000368662 A0A1B0GU69 56 aa5.78□□□□□ -1.48
TUBE1-202ENST00000368662 ADM2Q7Z4H4 148 aa5.78□□□□□ -1.48
TUBE1-202ENST00000368662 PRR15LQ9BU68 103 aa5.77□□□□□ -1.49
TUBE1-202ENST00000368662 LORP23490 312 aaPredicted RBP5.76□□□□□ -1.49
TUBE1-202ENST00000368662 KRTAP9-8Q9BYQ0 159 aa5.73□□□□□ -1.49
TUBE1-202ENST00000368662 MT2AP02795 61 aa5.7□□□□□ -1.5
TUBE1-202ENST00000368662 P0C880 135 aa5.7□□□□□ -1.5
TUBE1-202ENST00000368662 KRTAP10-10P60014 251 aa5.67□□□□□ -1.5
TUBE1-202ENST00000368662 CRIPTQ9P021 101 aa5.67□□□□□ -1.5
TUBE1-202ENST00000368662 PSPHP1O15172 72 aa5.66□□□□□ -1.5
TUBE1-202ENST00000368662 MT1FP04733 61 aa5.65□□□□□ -1.5
TUBE1-202ENST00000368662 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.51
TUBE1-202ENST00000368662 A0A1B0GU33 70 aa5.64□□□□□ -1.51
TUBE1-202ENST00000368662 H3BS24 57 aa5.63□□□□□ -1.51
TUBE1-202ENST00000368662 R4GN34 69 aa5.62□□□□□ -1.51
TUBE1-202ENST00000368662 Q5VV11 94 aa5.62□□□□□ -1.51
TUBE1-202ENST00000368662 M0QZ58 72 aa5.61□□□□□ -1.51
TUBE1-202ENST00000368662 UQCR11O14957 56 aa5.59□□□□□ -1.52
TUBE1-202ENST00000368662 SPRR2GQ9BYE4 73 aa5.54□□□□□ -1.52
TUBE1-202ENST00000368662 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.53□□□□□ -1.52
TUBE1-202ENST00000368662 KRTAP9-3Q9BYQ3 159 aa5.53□□□□□ -1.52
TUBE1-202ENST00000368662 A6NED7 52 aa5.52□□□□□ -1.53
TUBE1-202ENST00000368662 KRTAP13-4Q3LI77 160 aa5.52□□□□□ -1.53
TUBE1-202ENST00000368662 SPATA8Q6RVD6 105 aa5.52□□□□□ -1.53
TUBE1-202ENST00000368662 SVIPQ8NHG7 77 aa5.52□□□□□ -1.53
TUBE1-202ENST00000368662 KRTAP9-2Q9BYQ4 174 aa5.52□□□□□ -1.53
TUBE1-202ENST00000368662 KRTAP19-1Q8IUB9 90 aa5.51□□□□□ -1.53
TUBE1-202ENST00000368662 KRTAP9-6A0A140TA67 174 aa5.5□□□□□ -1.53
TUBE1-202ENST00000368662 MIR22HGQ0VDD5 57 aa5.49□□□□□ -1.53
TUBE1-202ENST00000368662 LINC01554Q52M75 96 aa5.47□□□□□ -1.53
TUBE1-202ENST00000368662 A0A0D9SG42 100 aa5.42□□□□□ -1.54
TUBE1-202ENST00000368662 A6NN06 94 aa5.42□□□□□ -1.54
TUBE1-202ENST00000368662 KRTAP19-8Q3LI54 63 aa5.41□□□□□ -1.54
TUBE1-202ENST00000368662 A8MU10 97 aa5.41□□□□□ -1.54
TUBE1-202ENST00000368662 CDC42SE1Q9NRR8 79 aa5.41□□□□□ -1.54
TUBE1-202ENST00000368662 PLAC4Q8WY50 150 aa5.35□□□□□ -1.55
TUBE1-202ENST00000368662 LCE3BQ5TA77 95 aa5.35□□□□□ -1.55
TUBE1-202ENST00000368662 BRK1Q8WUW1 75 aa5.33□□□□□ -1.56
TUBE1-202ENST00000368662 KRTAP12-1P59990 96 aa5.33□□□□□ -1.56
TUBE1-202ENST00000368662 SPINT4Q6UDR6 99 aa5.33□□□□□ -1.56
TUBE1-202ENST00000368662 K7ERS5 55 aa5.32□□□□□ -1.56
TUBE1-202ENST00000368662 MT1BP07438 61 aa5.32□□□□□ -1.56
TUBE1-202ENST00000368662 USH2AO75445 5202 aa5.32□□□□□ -1.56
TUBE1-202ENST00000368662 KRTAP12-2P59991 146 aa5.3□□□□□ -1.56
TUBE1-202ENST00000368662 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
TUBE1-202ENST00000368662 CAMK2N1Q7Z7J9 78 aa5.24□□□□□ -1.57
TUBE1-202ENST00000368662 KRTAP9-9Q9BYP9 154 aa5.24□□□□□ -1.57
TUBE1-202ENST00000368662 KRTAP9-4Q9BYQ2 154 aa5.24□□□□□ -1.57
TUBE1-202ENST00000368662 KRTAP4-12Q9BQ66 201 aa5.2□□□□□ -1.58
TUBE1-202ENST00000368662 FSIP2Q5CZC0 6907 aa5.19□□□□□ -1.58
TUBE1-202ENST00000368662 SSPOA2VEC9 5147 aa5.18□□□□□ -1.58
TUBE1-202ENST00000368662 PRO2289Q9P1D8 64 aa5.17□□□□□ -1.58
TUBE1-202ENST00000368662 PRO0628Q9UI54 55 aa5.15□□□□□ -1.58
TUBE1-202ENST00000368662 KRTAP19-6Q3LI70 58 aa5.14□□□□□ -1.59
TUBE1-202ENST00000368662 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
TUBE1-202ENST00000368662 MT1XP80297 61 aa5.12□□□□□ -1.59
TUBE1-202ENST00000368662 KRTAP10-5P60370 271 aa5.11□□□□□ -1.59
TUBE1-202ENST00000368662 CRCT1Q9UGL9 99 aa5.05□□□□□ -1.6
TUBE1-202ENST00000368662 PMAIP1Q13794 54 aa5.05□□□□□ -1.6
TUBE1-202ENST00000368662 C10orf95Q9H7T3 257 aa5.04□□□□□ -1.6
TUBE1-202ENST00000368662 ROMO1P60602 79 aa5.03□□□□□ -1.6
TUBE1-202ENST00000368662 LCE1DQ5T752 114 aa5□□□□□ -1.61
TUBE1-202ENST00000368662 FCGBPQ9Y6R7 5405 aaPredicted RBP4.98□□□□□ -1.61
TUBE1-202ENST00000368662 TNP1P09430 55 aa4.97□□□□□ -1.61
TUBE1-202ENST00000368662 KRTAP25-1Q3LHN0 102 aa4.94□□□□□ -1.62
TUBE1-202ENST00000368662 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
TUBE1-202ENST00000368662 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.62
TUBE1-202ENST00000368662 KRTAP10-7P60409 375 aaPredicted RBP4.9□□□□□ -1.63
TUBE1-202ENST00000368662 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
TUBE1-202ENST00000368662 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
TUBE1-202ENST00000368662 KTN1-AS1Q86SY8 53 aa4.79□□□□□ -1.64
TUBE1-202ENST00000368662 MACF1Q9UPN3 7388 aaKnown RBP4.78□□□□□ -1.64
TUBE1-202ENST00000368662 KMT2DO14686 5537 aa4.77□□□□□ -1.65
TUBE1-202ENST00000368662 PP632Q6XCG6 107 aa4.76□□□□□ -1.65
TUBE1-202ENST00000368662 LCE3AQ5TA76 89 aa4.73□□□□□ -1.65
TUBE1-202ENST00000368662 KRTAP5-3Q6L8H2 238 aa4.72□□□□□ -1.65
TUBE1-202ENST00000368662 KRTAP8-1Q8IUC2 63 aa4.69□□□□□ -1.66
TUBE1-202ENST00000368662 PRAC1Q96KF2 57 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms