RNA–Protein interactions for RNA: ENST00000367311.4

PHLDA3-202, Transcript of pleckstrin homology like domain family A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHLDA3, Length 2,640 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3-202ENST00000367311 KRTAP10-4P60372 401 aaPredicted RBP10.45□□□□□ -0.74
PHLDA3-202ENST00000367311 TPRXLQ17RH7 258 aa10.43□□□□□ -0.74
PHLDA3-202ENST00000367311 RPL37P61927 97 aaKnown RBP10.43□□□□□ -0.74
PHLDA3-202ENST00000367311 KRTAP21-3Q3LHN1 58 aa10.42□□□□□ -0.74
PHLDA3-202ENST00000367311 A0A0D9SG42 100 aa10.41□□□□□ -0.74
PHLDA3-202ENST00000367311 FAT3Q8TDW7 4589 aa10.4□□□□□ -0.75
PHLDA3-202ENST00000367311 KRTAP13-4Q3LI77 160 aa10.38□□□□□ -0.75
PHLDA3-202ENST00000367311 C10orf95Q9H7T3 257 aa10.35□□□□□ -0.75
PHLDA3-202ENST00000367311 KRTAP10-6P60371 365 aaPredicted RBP10.34□□□□□ -0.75
PHLDA3-202ENST00000367311 KRTAP3-3Q9BYR6 98 aa10.33□□□□□ -0.76
PHLDA3-202ENST00000367311 KRTAP10-8P60410 259 aa10.31□□□□□ -0.76
PHLDA3-202ENST00000367311 TNXBP22105 4242 aa10.29□□□□□ -0.76
PHLDA3-202ENST00000367311 A0A1B0GVY2 172 aa10.27□□□□□ -0.77
PHLDA3-202ENST00000367311 NDUFAF8A1L188 74 aa10.27□□□□□ -0.77
PHLDA3-202ENST00000367311 KMT2CQ8NEZ4 4911 aaKnown RBP10.24□□□□□ -0.77
PHLDA3-202ENST00000367311 LPAP08519 4548 aa10.23□□□□□ -0.77
PHLDA3-202ENST00000367311 KRTAP15-1Q3LI76 137 aa10.22□□□□□ -0.77
PHLDA3-202ENST00000367311 KRTAP3-2Q9BYR7 98 aa10.22□□□□□ -0.77
PHLDA3-202ENST00000367311 RYR2Q92736 4967 aa10.18□□□□□ -0.78
PHLDA3-202ENST00000367311 S4R3F8 94 aa10.11□□□□□ -0.79
PHLDA3-202ENST00000367311 XP32Q5T750 250 aa10.08□□□□□ -0.8
PHLDA3-202ENST00000367311 KRTAP12-2P59991 146 aa10.08□□□□□ -0.8
PHLDA3-202ENST00000367311 KRTAP17-1Q9BYP8 105 aa9.98□□□□□ -0.81
PHLDA3-202ENST00000367311 LRP2P98164 4655 aa9.97□□□□□ -0.81
PHLDA3-202ENST00000367311 Q5VSD8 79 aa9.95□□□□□ -0.82
PHLDA3-202ENST00000367311 KRTAP12-1P59990 96 aa9.93□□□□□ -0.82
PHLDA3-202ENST00000367311 RYR3Q15413 4870 aa9.83□□□□□ -0.84
PHLDA3-202ENST00000367311 KIAA1109Q2LD37 5005 aa9.83□□□□□ -0.84
PHLDA3-202ENST00000367311 RYR1P21817 5038 aa9.81□□□□□ -0.84
PHLDA3-202ENST00000367311 MT1HL1P0DM35 61 aa9.7□□□□□ -0.86
PHLDA3-202ENST00000367311 ABCA13Q86UQ4 5058 aa9.7□□□□□ -0.86
PHLDA3-202ENST00000367311 M0QZ58 72 aa9.66□□□□□ -0.86
PHLDA3-202ENST00000367311 A0A0A0MQY5 61 aa9.53□□□□□ -0.88
PHLDA3-202ENST00000367311 PLAC4Q8WY50 150 aa9.52□□□□□ -0.89
PHLDA3-202ENST00000367311 LORP23490 312 aaPredicted RBP9.5□□□□□ -0.89
PHLDA3-202ENST00000367311 EPPK1P58107 5090 aaKnown RBP9.49□□□□□ -0.89
PHLDA3-202ENST00000367311 R4GN34 69 aa9.44□□□□□ -0.9
PHLDA3-202ENST00000367311 LUZP6Q538Z0 58 aa9.43□□□□□ -0.9
PHLDA3-202ENST00000367311 MUC17Q685J3 4493 aa9.36□□□□□ -0.91
PHLDA3-202ENST00000367311 KRTAP4-5Q9BYR2 181 aa9.34□□□□□ -0.91
PHLDA3-202ENST00000367311 KRTAP4-1Q9BYQ7 146 aa9.28□□□□□ -0.92
PHLDA3-202ENST00000367311 MUC2Q02817 5179 aa9.27□□□□□ -0.93
PHLDA3-202ENST00000367311 PP632Q6XCG6 107 aa9.07□□□□□ -0.96
PHLDA3-202ENST00000367311 SEC61BP60468 96 aaKnown RBP9.04□□□□□ -0.96
PHLDA3-202ENST00000367311 CAMK2N1Q7Z7J9 78 aa9.03□□□□□ -0.96
PHLDA3-202ENST00000367311 KRTAP19-2Q3LHN2 52 aa8.98□□□□□ -0.97
PHLDA3-202ENST00000367311 J3QL48 77 aa8.92□□□□□ -0.98
PHLDA3-202ENST00000367311 HERC2O95714 4834 aa8.92□□□□□ -0.98
PHLDA3-202ENST00000367311 PCLOQ9Y6V0 5065 aa8.89□□□□□ -0.99
PHLDA3-202ENST00000367311 FLGP20930 4061 aaPredicted RBP8.79□□□□□ -1
PHLDA3-202ENST00000367311 FAT4Q6V0I7 4981 aa8.78□□□□□ -1
PHLDA3-202ENST00000367311 SPRR5A0A1B0GTR4 108 aa8.69□□□□□ -1.02
PHLDA3-202ENST00000367311 TNP1P09430 55 aa8.67□□□□□ -1.02
PHLDA3-202ENST00000367311 HERC1Q15751 4861 aa8.66□□□□□ -1.02
PHLDA3-202ENST00000367311 BIRC6Q9NR09 4857 aa8.62□□□□□ -1.03
PHLDA3-202ENST00000367311 KRTAP23-1A1A580 65 aa8.56□□□□□ -1.04
PHLDA3-202ENST00000367311 RNF213Q63HN8 5207 aa8.42□□□□□ -1.06
PHLDA3-202ENST00000367311 HMCN2Q8NDA2 5059 aa8.4□□□□□ -1.06
PHLDA3-202ENST00000367311 LCE2CQ5TA81 110 aa8.36□□□□□ -1.07
PHLDA3-202ENST00000367311 KRTAP19-1Q8IUB9 90 aa8.34□□□□□ -1.07
PHLDA3-202ENST00000367311 PRO2289Q9P1D8 64 aa8.31□□□□□ -1.08
PHLDA3-202ENST00000367311 LCE3AQ5TA76 89 aa8.3□□□□□ -1.08
PHLDA3-202ENST00000367311 M0R2T5 61 aa8.28□□□□□ -1.08
PHLDA3-202ENST00000367311 UBR4Q5T4S7 5183 aa8.25□□□□□ -1.09
PHLDA3-202ENST00000367311 SPRR2GQ9BYE4 73 aa8.25□□□□□ -1.09
PHLDA3-202ENST00000367311 MT1FP04733 61 aa8.14□□□□□ -1.11
PHLDA3-202ENST00000367311 KRTAP10-10P60014 251 aa8.12□□□□□ -1.11
PHLDA3-202ENST00000367311 MT1HP80294 61 aa8.11□□□□□ -1.11
PHLDA3-202ENST00000367311 INE1O15225 51 aa8.1□□□□□ -1.11
PHLDA3-202ENST00000367311 MT2AP02795 61 aa8.06□□□□□ -1.12
PHLDA3-202ENST00000367311 KRTAP9-8Q9BYQ0 159 aa7.96□□□□□ -1.14
PHLDA3-202ENST00000367311 KRTAP8-1Q8IUC2 63 aa7.91□□□□□ -1.14
PHLDA3-202ENST00000367311 KRTAP10-5P60370 271 aa7.9□□□□□ -1.14
PHLDA3-202ENST00000367311 MT1XP80297 61 aa7.88□□□□□ -1.15
PHLDA3-202ENST00000367311 MT1BP07438 61 aa7.87□□□□□ -1.15
PHLDA3-202ENST00000367311 KRTAP10-7P60409 375 aaPredicted RBP7.8□□□□□ -1.16
PHLDA3-202ENST00000367311 KRTAP19-8Q3LI54 63 aa7.8□□□□□ -1.16
PHLDA3-202ENST00000367311 KRTAP12-3P60328 96 aa7.79□□□□□ -1.16
PHLDA3-202ENST00000367311 KRTAP10-12P60413 245 aa7.77□□□□□ -1.17
PHLDA3-202ENST00000367311 KMT2DO14686 5537 aa7.74□□□□□ -1.17
PHLDA3-202ENST00000367311 USH2AO75445 5202 aa7.7□□□□□ -1.18
PHLDA3-202ENST00000367311 KRTAP9-3Q9BYQ3 159 aa7.58□□□□□ -1.2
PHLDA3-202ENST00000367311 LCE2DQ5TA82 110 aaPredicted RBP7.48□□□□□ -1.21
PHLDA3-202ENST00000367311 KRTAP19-5Q3LI72 72 aa7.48□□□□□ -1.21
PHLDA3-202ENST00000367311 KRTAP4-8A0A0G2JLE6 195 aa7.37□□□□□ -1.23
PHLDA3-202ENST00000367311 KRTAP4-8Q9BYQ9 185 aa7.37□□□□□ -1.23
PHLDA3-202ENST00000367311 LCE2BO14633 110 aa7.35□□□□□ -1.23
PHLDA3-202ENST00000367311 LCE3CQ5T5A8 94 aa7.32□□□□□ -1.24
PHLDA3-202ENST00000367311 KRTAP9-6A8MVA2 160 aa7.28□□□□□ -1.24
PHLDA3-202ENST00000367311 KRTAP4-7Q9BYR0 210 aa7.24□□□□□ -1.25
PHLDA3-202ENST00000367311 LCE2AQ5TA79 106 aaPredicted RBP7.07□□□□□ -1.28
PHLDA3-202ENST00000367311 KRTAP2-3P0C7H8 128 aa7.04□□□□□ -1.28
PHLDA3-202ENST00000367311 KRTAP2-4Q9BYR9 128 aa7.04□□□□□ -1.28
PHLDA3-202ENST00000367311 KRTAP2-1Q9BYU5 128 aa7.04□□□□□ -1.28
PHLDA3-202ENST00000367311 KRTAP19-7Q3SYF9 63 aa7.02□□□□□ -1.29
PHLDA3-202ENST00000367311 FSIP2Q5CZC0 6907 aa6.87□□□□□ -1.31
PHLDA3-202ENST00000367311 MT1LQ93083 61 aa6.8□□□□□ -1.32
PHLDA3-202ENST00000367311 SSPOA2VEC9 5147 aa6.76□□□□□ -1.33
PHLDA3-202ENST00000367311 MT1EP04732 61 aa6.76□□□□□ -1.33
PHLDA3-202ENST00000367311 LOC100996750A0A140TA64 210 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms