RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 A8MUU9 505 aa7.99□□□□□ -1.13
PRKN-204ENST00000366896 C20orf166-AS1Q96NR2 134 aa7.98□□□□□ -1.13
PRKN-204ENST00000366896 MYCBP2O75592 4640 aa7.98□□□□□ -1.13
PRKN-204ENST00000366896 TNXBP22105 4242 aa7.97□□□□□ -1.13
PRKN-204ENST00000366896 H3BS24 57 aa7.96□□□□□ -1.14
PRKN-204ENST00000366896 KRTAP10-8P60410 259 aa7.96□□□□□ -1.14
PRKN-204ENST00000366896 C9orf92A6NGG3 77 aa7.95□□□□□ -1.14
PRKN-204ENST00000366896 MT1HL1P0DM35 61 aa7.92□□□□□ -1.14
PRKN-204ENST00000366896 KRTAP25-1Q3LHN0 102 aa7.91□□□□□ -1.14
PRKN-204ENST00000366896 A0A1B0GU33 70 aa7.89□□□□□ -1.15
PRKN-204ENST00000366896 H1FX-AS1Q4G0G2 97 aa7.86□□□□□ -1.15
PRKN-204ENST00000366896 KRTAP3-1Q9BYR8 98 aa7.85□□□□□ -1.15
PRKN-204ENST00000366896 DMBT1Q9UGM3 2413 aaPredicted RBP7.8□□□□□ -1.16
PRKN-204ENST00000366896 ROMO1P60602 79 aa7.79□□□□□ -1.16
PRKN-204ENST00000366896 PCLOQ9Y6V0 5065 aa7.78□□□□□ -1.16
PRKN-204ENST00000366896 J3QL48 77 aa7.78□□□□□ -1.16
PRKN-204ENST00000366896 COX6B2Q6YFQ2 88 aa7.73□□□□□ -1.17
PRKN-204ENST00000366896 K7ERS5 55 aa7.71□□□□□ -1.18
PRKN-204ENST00000366896 CRIPTQ9P021 101 aa7.67□□□□□ -1.18
PRKN-204ENST00000366896 P0C880 135 aa7.56□□□□□ -1.2
PRKN-204ENST00000366896 HERC1Q15751 4861 aa7.56□□□□□ -1.2
PRKN-204ENST00000366896 RPL37P61927 97 aaKnown RBP7.55□□□□□ -1.2
PRKN-204ENST00000366896 KRTAP10-6P60371 365 aaPredicted RBP7.54□□□□□ -1.2
PRKN-204ENST00000366896 KRTAP13-4Q3LI77 160 aa7.5□□□□□ -1.21
PRKN-204ENST00000366896 KRTAP3-3Q9BYR6 98 aa7.5□□□□□ -1.21
PRKN-204ENST00000366896 TPRXLQ17RH7 258 aa7.49□□□□□ -1.21
PRKN-204ENST00000366896 XP32Q5T750 250 aa7.47□□□□□ -1.21
PRKN-204ENST00000366896 LPAP08519 4548 aa7.47□□□□□ -1.21
PRKN-204ENST00000366896 KRTAP3-2Q9BYR7 98 aa7.46□□□□□ -1.22
PRKN-204ENST00000366896 HMCN2Q8NDA2 5059 aa7.45□□□□□ -1.22
PRKN-204ENST00000366896 A0A0D9SG42 100 aa7.44□□□□□ -1.22
PRKN-204ENST00000366896 S4R3F8 94 aa7.41□□□□□ -1.22
PRKN-204ENST00000366896 SPINT4Q6UDR6 99 aa7.4□□□□□ -1.23
PRKN-204ENST00000366896 LRP2P98164 4655 aa7.38□□□□□ -1.23
PRKN-204ENST00000366896 C10orf95Q9H7T3 257 aa7.36□□□□□ -1.23
PRKN-204ENST00000366896 KRTAP15-1Q3LI76 137 aa7.3□□□□□ -1.24
PRKN-204ENST00000366896 KRTAP12-2P59991 146 aa7.29□□□□□ -1.24
PRKN-204ENST00000366896 MUC17Q685J3 4493 aa7.26□□□□□ -1.25
PRKN-204ENST00000366896 SEC61BP60468 96 aaKnown RBP7.23□□□□□ -1.25
PRKN-204ENST00000366896 KRTAP12-1P59990 96 aa7.22□□□□□ -1.25
PRKN-204ENST00000366896 NDUFAF8A1L188 74 aa7.21□□□□□ -1.26
PRKN-204ENST00000366896 M0QZ58 72 aa7.15□□□□□ -1.26
PRKN-204ENST00000366896 KRTAP4-1Q9BYQ7 146 aa7.11□□□□□ -1.27
PRKN-204ENST00000366896 UBR4Q5T4S7 5183 aa7.1□□□□□ -1.27
PRKN-204ENST00000366896 RNF213Q63HN8 5207 aa7.02□□□□□ -1.29
PRKN-204ENST00000366896 MUC2Q02817 5179 aa7□□□□□ -1.29
PRKN-204ENST00000366896 KRTAP19-2Q3LHN2 52 aa6.89□□□□□ -1.31
PRKN-204ENST00000366896 R4GN34 69 aa6.87□□□□□ -1.31
PRKN-204ENST00000366896 LORP23490 312 aaPredicted RBP6.84□□□□□ -1.31
PRKN-204ENST00000366896 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
PRKN-204ENST00000366896 PLAC4Q8WY50 150 aa6.81□□□□□ -1.32
PRKN-204ENST00000366896 FAT4Q6V0I7 4981 aa6.8□□□□□ -1.32
PRKN-204ENST00000366896 FLGP20930 4061 aaPredicted RBP6.75□□□□□ -1.33
PRKN-204ENST00000366896 MT1HP80294 61 aa6.69□□□□□ -1.34
PRKN-204ENST00000366896 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
PRKN-204ENST00000366896 M0R2T5 61 aa6.57□□□□□ -1.36
PRKN-204ENST00000366896 LUZP6Q538Z0 58 aa6.57□□□□□ -1.36
PRKN-204ENST00000366896 LCE2AQ5TA79 106 aaPredicted RBP6.57□□□□□ -1.36
PRKN-204ENST00000366896 CAMK2N1Q7Z7J9 78 aa6.52□□□□□ -1.37
PRKN-204ENST00000366896 A0A0A0MQY5 61 aa6.49□□□□□ -1.37
PRKN-204ENST00000366896 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
PRKN-204ENST00000366896 KRTAP9-8Q9BYQ0 159 aa6.41□□□□□ -1.38
PRKN-204ENST00000366896 MT2AP02795 61 aa6.37□□□□□ -1.39
PRKN-204ENST00000366896 SPRR5A0A1B0GTR4 108 aa6.34□□□□□ -1.39
PRKN-204ENST00000366896 MT1FP04733 61 aa6.33□□□□□ -1.4
PRKN-204ENST00000366896 TNP1P09430 55 aa6.33□□□□□ -1.4
PRKN-204ENST00000366896 KRTAP10-10P60014 251 aa6.29□□□□□ -1.4
PRKN-204ENST00000366896 SPRR2GQ9BYE4 73 aa6.27□□□□□ -1.41
PRKN-204ENST00000366896 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
PRKN-204ENST00000366896 KRTAP19-1Q8IUB9 90 aa6.18□□□□□ -1.42
PRKN-204ENST00000366896 LCE2BO14633 110 aa6.05□□□□□ -1.44
PRKN-204ENST00000366896 LCE2DQ5TA82 110 aaPredicted RBP6.04□□□□□ -1.44
PRKN-204ENST00000366896 KRTAP19-8Q3LI54 63 aa6.01□□□□□ -1.45
PRKN-204ENST00000366896 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
PRKN-204ENST00000366896 MT1BP07438 61 aa5.95□□□□□ -1.46
PRKN-204ENST00000366896 USH2AO75445 5202 aa5.93□□□□□ -1.46
PRKN-204ENST00000366896 KRTAP9-2Q9BYQ4 174 aa5.91□□□□□ -1.46
PRKN-204ENST00000366896 KRTAP8-1Q8IUC2 63 aa5.9□□□□□ -1.47
PRKN-204ENST00000366896 PRO2289Q9P1D8 64 aa5.9□□□□□ -1.47
PRKN-204ENST00000366896 KRTAP10-5P60370 271 aa5.84□□□□□ -1.47
PRKN-204ENST00000366896 MT1XP80297 61 aa5.83□□□□□ -1.48
PRKN-204ENST00000366896 INE1O15225 51 aa5.81□□□□□ -1.48
PRKN-204ENST00000366896 SSPOA2VEC9 5147 aa5.79□□□□□ -1.48
PRKN-204ENST00000366896 FSIP2Q5CZC0 6907 aa5.77□□□□□ -1.49
PRKN-204ENST00000366896 KRTAP19-6Q3LI70 58 aa5.73□□□□□ -1.49
PRKN-204ENST00000366896 KRTAP10-12P60413 245 aa5.72□□□□□ -1.49
PRKN-204ENST00000366896 KRTAP12-3P60328 96 aa5.69□□□□□ -1.5
PRKN-204ENST00000366896 KRTAP10-7P60409 375 aaPredicted RBP5.69□□□□□ -1.5
PRKN-204ENST00000366896 CRCT1Q9UGL9 99 aa5.67□□□□□ -1.5
PRKN-204ENST00000366896 KRTAP9-6A0A140TA67 174 aa5.63□□□□□ -1.51
PRKN-204ENST00000366896 FCGBPQ9Y6R7 5405 aaPredicted RBP5.55□□□□□ -1.52
PRKN-204ENST00000366896 KRTAP19-5Q3LI72 72 aa5.44□□□□□ -1.54
PRKN-204ENST00000366896 KMT2DO14686 5537 aa5.42□□□□□ -1.54
PRKN-204ENST00000366896 LCE3CQ5T5A8 94 aa5.37□□□□□ -1.55
PRKN-204ENST00000366896 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
PRKN-204ENST00000366896 KRTAP4-8Q9BYQ9 185 aa5.33□□□□□ -1.56
PRKN-204ENST00000366896 MACF1Q9UPN3 7388 aaKnown RBP5.31□□□□□ -1.56
PRKN-204ENST00000366896 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
PRKN-204ENST00000366896 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.26□□□□□ -1.57
PRKN-204ENST00000366896 KRTAP9-6A8MVA2 160 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms