RNA–Protein interactions for RNA: ENST00000366742.5

MRPL55-215, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-215ENST00000366742 KRTAP19-6Q3LI70 58 aa7.09□□□□□ -1.27
MRPL55-215ENST00000366742 IMUPQ9GZP8 106 aa7.09□□□□□ -1.27
MRPL55-215ENST00000366742 A8MUN3 132 aa7.08□□□□□ -1.28
MRPL55-215ENST00000366742 H3BPC8 53 aa7.08□□□□□ -1.28
MRPL55-215ENST00000366742 MT-ATP8P03928 68 aa7.08□□□□□ -1.28
MRPL55-215ENST00000366742 SCGB1A1P11684 91 aa7.08□□□□□ -1.28
MRPL55-215ENST00000366742 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.04□□□□□ -1.28
MRPL55-215ENST00000366742 NDUFC1O43677 76 aa7.02□□□□□ -1.29
MRPL55-215ENST00000366742 SPRR2GQ9BYE4 73 aa7.02□□□□□ -1.29
MRPL55-215ENST00000366742 H0YAA0 97 aa6.97□□□□□ -1.29
MRPL55-215ENST00000366742 KRTAP19-8Q3LI54 63 aa6.97□□□□□ -1.29
MRPL55-215ENST00000366742 MT1BP07438 61 aa6.96□□□□□ -1.3
MRPL55-215ENST00000366742 DMAC1Q96GE9 116 aa6.95□□□□□ -1.3
MRPL55-215ENST00000366742 TRAV7A0A075B6U4 112 aa6.94□□□□□ -1.3
MRPL55-215ENST00000366742 SMIM20Q8N5G0 67 aa6.93□□□□□ -1.3
MRPL55-215ENST00000366742 CRIPTQ9P021 101 aa6.92□□□□□ -1.3
MRPL55-215ENST00000366742 Q5VV11 94 aa6.91□□□□□ -1.3
MRPL55-215ENST00000366742 KRTAP9-7A8MTY7 169 aa6.9□□□□□ -1.3
MRPL55-215ENST00000366742 ADM2Q7Z4H4 148 aa6.88□□□□□ -1.31
MRPL55-215ENST00000366742 MACF1Q9UPN3 7388 aaKnown RBP6.84□□□□□ -1.31
MRPL55-215ENST00000366742 SNURFQ9Y675 71 aa6.78□□□□□ -1.32
MRPL55-215ENST00000366742 A6NN06 94 aa6.77□□□□□ -1.33
MRPL55-215ENST00000366742 ACYP2P14621 99 aa6.77□□□□□ -1.33
MRPL55-215ENST00000366742 P0C880 135 aa6.76□□□□□ -1.33
MRPL55-215ENST00000366742 SERP2Q8N6R1 65 aa6.76□□□□□ -1.33
MRPL55-215ENST00000366742 KRTAP3-2Q9BYR7 98 aa6.76□□□□□ -1.33
MRPL55-215ENST00000366742 KRTAP10-5P60370 271 aa6.75□□□□□ -1.33
MRPL55-215ENST00000366742 SYNE2Q8WXH0 6885 aaKnown RBP6.74□□□□□ -1.33
MRPL55-215ENST00000366742 C20orf197Q8N268 126 aa6.72□□□□□ -1.33
MRPL55-215ENST00000366742 SPANXA2-OT1Q8N9U9 137 aa6.69□□□□□ -1.34
MRPL55-215ENST00000366742 R4GN34 69 aa6.66□□□□□ -1.34
MRPL55-215ENST00000366742 SPTSSBQ8NFR3 76 aa6.64□□□□□ -1.35
MRPL55-215ENST00000366742 M0QZ58 72 aa6.63□□□□□ -1.35
MRPL55-215ENST00000366742 KRTAP6-3Q3LI67 103 aa6.63□□□□□ -1.35
MRPL55-215ENST00000366742 CHKB-CPT1BH3BT56 60 aa6.62□□□□□ -1.35
MRPL55-215ENST00000366742 COX7CP15954 63 aa6.58□□□□□ -1.36
MRPL55-215ENST00000366742 PLAC4Q8WY50 150 aa6.56□□□□□ -1.36
MRPL55-215ENST00000366742 MT1XP80297 61 aa6.55□□□□□ -1.36
MRPL55-215ENST00000366742 LINC01554Q52M75 96 aa6.51□□□□□ -1.37
MRPL55-215ENST00000366742 CYSTM1Q9H1C7 97 aa6.5□□□□□ -1.37
MRPL55-215ENST00000366742 PRO2289Q9P1D8 64 aa6.5□□□□□ -1.37
MRPL55-215ENST00000366742 COA5Q86WW8 74 aa6.49□□□□□ -1.37
MRPL55-215ENST00000366742 H7BZZ5 65 aa6.48□□□□□ -1.37
MRPL55-215ENST00000366742 MUC12Q9UKN1 5478 aa6.4□□□□□ -1.38
MRPL55-215ENST00000366742 KRTAP5-9P26371 169 aa6.4□□□□□ -1.38
MRPL55-215ENST00000366742 KRTAP13-4Q3LI77 160 aa6.39□□□□□ -1.39
MRPL55-215ENST00000366742 ANAPC13Q9BS18 74 aa6.39□□□□□ -1.39
MRPL55-215ENST00000366742 KMT2DO14686 5537 aa6.38□□□□□ -1.39
MRPL55-215ENST00000366742 NEBP20929 6669 aa6.36□□□□□ -1.39
MRPL55-215ENST00000366742 KRTAP12-2P59991 146 aa6.36□□□□□ -1.39
MRPL55-215ENST00000366742 CCDC179H3BU77 68 aa6.3□□□□□ -1.4
MRPL55-215ENST00000366742 SEC61GP60059 68 aa6.27□□□□□ -1.41
MRPL55-215ENST00000366742 SERP1Q9Y6X1 66 aa6.27□□□□□ -1.41
MRPL55-215ENST00000366742 MDN1Q9NU22 5596 aa6.25□□□□□ -1.41
MRPL55-215ENST00000366742 KRTAP10-7P60409 375 aaPredicted RBP6.25□□□□□ -1.41
MRPL55-215ENST00000366742 KRTAP8-1Q8IUC2 63 aa6.23□□□□□ -1.41
MRPL55-215ENST00000366742 KRTAP4-8A0A0G2JLE6 195 aa6.22□□□□□ -1.41
MRPL55-215ENST00000366742 KRTAP10-12P60413 245 aa6.22□□□□□ -1.41
MRPL55-215ENST00000366742 KRTAP4-8Q9BYQ9 185 aa6.22□□□□□ -1.41
MRPL55-215ENST00000366742 SPRR2FQ96RM1 72 aa6.21□□□□□ -1.42
MRPL55-215ENST00000366742 A0A1B0GU33 70 aa6.2□□□□□ -1.42
MRPL55-215ENST00000366742 SPATA8Q6RVD6 105 aa6.18□□□□□ -1.42
MRPL55-215ENST00000366742 A0A0D9SG42 100 aa6.15□□□□□ -1.42
MRPL55-215ENST00000366742 ATP5EP56381 51 aaPredicted RBP6.15□□□□□ -1.42
MRPL55-215ENST00000366742 CAMK2N1Q7Z7J9 78 aa6.14□□□□□ -1.43
MRPL55-215ENST00000366742 A0A1B0GU69 56 aa6.12□□□□□ -1.43
MRPL55-215ENST00000366742 SPRR2EP22531 72 aa6.08□□□□□ -1.44
MRPL55-215ENST00000366742 SPRR2BP35325 72 aa6.08□□□□□ -1.44
MRPL55-215ENST00000366742 SPRR2AP35326 72 aa6.08□□□□□ -1.44
MRPL55-215ENST00000366742 KRTAP12-1P59990 96 aa6.08□□□□□ -1.44
MRPL55-215ENST00000366742 LCE1AQ5T7P2 110 aa6.06□□□□□ -1.44
MRPL55-215ENST00000366742 KRTAP20-1Q3LI63 56 aa6.05□□□□□ -1.44
MRPL55-215ENST00000366742 SPINT4Q6UDR6 99 aa6.05□□□□□ -1.44
MRPL55-215ENST00000366742 TMEM258P61165 79 aa6.04□□□□□ -1.44
MRPL55-215ENST00000366742 SMIM26A0A096LP01 95 aa6□□□□□ -1.45
MRPL55-215ENST00000366742 A8MU10 97 aa5.99□□□□□ -1.45
MRPL55-215ENST00000366742 LINC01558Q9Y6Z2 57 aa5.99□□□□□ -1.45
MRPL55-215ENST00000366742 PRR15LQ9BU68 103 aa5.96□□□□□ -1.46
MRPL55-215ENST00000366742 KRTAP2-3P0C7H8 128 aa5.94□□□□□ -1.46
MRPL55-215ENST00000366742 KRTAP2-4Q9BYR9 128 aa5.94□□□□□ -1.46
MRPL55-215ENST00000366742 SPRR2DP22532 72 aa5.87□□□□□ -1.47
MRPL55-215ENST00000366742 KRTAP19-7Q3SYF9 63 aa5.86□□□□□ -1.47
MRPL55-215ENST00000366742 C10orf95Q9H7T3 257 aa5.81□□□□□ -1.48
MRPL55-215ENST00000366742 MT1EP04732 61 aa5.8□□□□□ -1.48
MRPL55-215ENST00000366742 UQCR11O14957 56 aa5.79□□□□□ -1.48
MRPL55-215ENST00000366742 KRTAP2-2Q9BYT5 123 aa5.77□□□□□ -1.49
MRPL55-215ENST00000366742 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
MRPL55-215ENST00000366742 KRTAP19-5Q3LI72 72 aa5.74□□□□□ -1.49
MRPL55-215ENST00000366742 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
MRPL55-215ENST00000366742 TNP1P09430 55 aa5.71□□□□□ -1.5
MRPL55-215ENST00000366742 LCE3BQ5TA77 95 aa5.71□□□□□ -1.5
MRPL55-215ENST00000366742 KRTAP19-3Q7Z4W3 81 aa5.71□□□□□ -1.5
MRPL55-215ENST00000366742 MIR22HGQ0VDD5 57 aa5.68□□□□□ -1.5
MRPL55-215ENST00000366742 Q1T7F1 81 aa5.68□□□□□ -1.5
MRPL55-215ENST00000366742 LCE3AQ5TA76 89 aa5.67□□□□□ -1.5
MRPL55-215ENST00000366742 V9GYY9 64 aa5.67□□□□□ -1.5
MRPL55-215ENST00000366742 PSPHP1O15172 72 aa5.65□□□□□ -1.5
MRPL55-215ENST00000366742 MT1GP13640 62 aa5.58□□□□□ -1.52
MRPL55-215ENST00000366742 MT1LQ93083 61 aa5.56□□□□□ -1.52
MRPL55-215ENST00000366742 PCP4P48539 62 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms