RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 LINC00643Q86TS7 51 aa4.7□□□□□ -1.66
YBX3-203ENST00000366286 ATOX1O00244 68 aa4.69□□□□□ -1.66
YBX3-203ENST00000366286 KLKP1Q107X0 134 aa4.66□□□□□ -1.66
YBX3-203ENST00000366286 SPRR2GQ9BYE4 73 aa4.66□□□□□ -1.66
YBX3-203ENST00000366286 MT1BP07438 61 aa4.65□□□□□ -1.67
YBX3-203ENST00000366286 MACF1Q9UPN3 7388 aaKnown RBP4.64□□□□□ -1.67
YBX3-203ENST00000366286 KRTAP19-8Q3LI54 63 aa4.64□□□□□ -1.67
YBX3-203ENST00000366286 Q5VV11 94 aa4.64□□□□□ -1.67
YBX3-203ENST00000366286 LINC00208Q96KT6 92 aa4.62□□□□□ -1.67
YBX3-203ENST00000366286 OCR1Q9BZK8 76 aa4.62□□□□□ -1.67
YBX3-203ENST00000366286 A8MUN3 132 aa4.6□□□□□ -1.67
YBX3-203ENST00000366286 NDUFC1O43677 76 aa4.6□□□□□ -1.67
YBX3-203ENST00000366286 MP68P56378 58 aa4.59□□□□□ -1.67
YBX3-203ENST00000366286 IMUPQ9GZP8 106 aa4.59□□□□□ -1.67
YBX3-203ENST00000366286 A6NN06 94 aa4.58□□□□□ -1.68
YBX3-203ENST00000366286 J3QR89 54 aa4.58□□□□□ -1.68
YBX3-203ENST00000366286 LCE3BQ5TA77 95 aa4.57□□□□□ -1.68
YBX3-203ENST00000366286 CRIPTQ9P021 101 aa4.57□□□□□ -1.68
YBX3-203ENST00000366286 H0YAA0 97 aa4.56□□□□□ -1.68
YBX3-203ENST00000366286 KRTAP4-8A0A0G2JLE6 195 aa4.55□□□□□ -1.68
YBX3-203ENST00000366286 SYNE2Q8WXH0 6885 aaKnown RBP4.55□□□□□ -1.68
YBX3-203ENST00000366286 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
YBX3-203ENST00000366286 H3BPC8 53 aa4.53□□□□□ -1.68
YBX3-203ENST00000366286 KRTAP10-5P60370 271 aa4.53□□□□□ -1.68
YBX3-203ENST00000366286 KRTAP9-9Q9BYP9 154 aa4.53□□□□□ -1.68
YBX3-203ENST00000366286 KRTAP9-4Q9BYQ2 154 aa4.53□□□□□ -1.68
YBX3-203ENST00000366286 ADM2Q7Z4H4 148 aa4.52□□□□□ -1.69
YBX3-203ENST00000366286 SCGB1A1P11684 91 aa4.51□□□□□ -1.69
YBX3-203ENST00000366286 DMAC1Q96GE9 116 aa4.49□□□□□ -1.69
YBX3-203ENST00000366286 MT-ATP8P03928 68 aa4.45□□□□□ -1.7
YBX3-203ENST00000366286 P0C880 135 aa4.43□□□□□ -1.7
YBX3-203ENST00000366286 KRTAP4-7Q9BYR0 210 aa4.43□□□□□ -1.7
YBX3-203ENST00000366286 K7ERU9 68 aa4.41□□□□□ -1.7
YBX3-203ENST00000366286 C20orf197Q8N268 126 aa4.4□□□□□ -1.71
YBX3-203ENST00000366286 KRTAP4-12Q9BQ66 201 aa4.4□□□□□ -1.71
YBX3-203ENST00000366286 R4GN34 69 aa4.4□□□□□ -1.71
YBX3-203ENST00000366286 TRAV7A0A075B6U4 112 aa4.39□□□□□ -1.71
YBX3-203ENST00000366286 SMIM20Q8N5G0 67 aa4.39□□□□□ -1.71
YBX3-203ENST00000366286 M0QZ58 72 aa4.38□□□□□ -1.71
YBX3-203ENST00000366286 MT1XP80297 61 aa4.37□□□□□ -1.71
YBX3-203ENST00000366286 ACYP2P14621 99 aa4.36□□□□□ -1.71
YBX3-203ENST00000366286 PLAC4Q8WY50 150 aa4.36□□□□□ -1.71
YBX3-203ENST00000366286 KRTAP5-9P26371 169 aa4.35□□□□□ -1.71
YBX3-203ENST00000366286 PRO2289Q9P1D8 64 aa4.35□□□□□ -1.71
YBX3-203ENST00000366286 SNURFQ9Y675 71 aa4.32□□□□□ -1.72
YBX3-203ENST00000366286 MUC12Q9UKN1 5478 aa4.32□□□□□ -1.72
YBX3-203ENST00000366286 LINC01554Q52M75 96 aa4.31□□□□□ -1.72
YBX3-203ENST00000366286 SPTSSBQ8NFR3 76 aa4.31□□□□□ -1.72
YBX3-203ENST00000366286 CHKB-CPT1BH3BT56 60 aa4.29□□□□□ -1.72
YBX3-203ENST00000366286 NEBP20929 6669 aa4.29□□□□□ -1.72
YBX3-203ENST00000366286 LCE1DQ5T752 114 aa4.26□□□□□ -1.73
YBX3-203ENST00000366286 KRTAP4-2Q9BYR5 136 aa4.26□□□□□ -1.73
YBX3-203ENST00000366286 SERP2Q8N6R1 65 aa4.25□□□□□ -1.73
YBX3-203ENST00000366286 SPANXA2-OT1Q8N9U9 137 aa4.25□□□□□ -1.73
YBX3-203ENST00000366286 KMT2DO14686 5537 aa4.25□□□□□ -1.73
YBX3-203ENST00000366286 KRTAP12-2P59991 146 aa4.24□□□□□ -1.73
YBX3-203ENST00000366286 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
YBX3-203ENST00000366286 KRTAP20-1Q3LI63 56 aa4.21□□□□□ -1.74
YBX3-203ENST00000366286 KRTAP8-1Q8IUC2 63 aa4.21□□□□□ -1.74
YBX3-203ENST00000366286 MDN1Q9NU22 5596 aa4.2□□□□□ -1.74
YBX3-203ENST00000366286 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
YBX3-203ENST00000366286 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
YBX3-203ENST00000366286 SPRR2EP22531 72 aa4.17□□□□□ -1.74
YBX3-203ENST00000366286 SPRR2BP35325 72 aa4.17□□□□□ -1.74
YBX3-203ENST00000366286 SPRR2AP35326 72 aa4.17□□□□□ -1.74
YBX3-203ENST00000366286 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
YBX3-203ENST00000366286 KRTAP13-4Q3LI77 160 aa4.16□□□□□ -1.74
YBX3-203ENST00000366286 COA5Q86WW8 74 aa4.15□□□□□ -1.75
YBX3-203ENST00000366286 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
YBX3-203ENST00000366286 COX7CP15954 63 aa4.12□□□□□ -1.75
YBX3-203ENST00000366286 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
YBX3-203ENST00000366286 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
YBX3-203ENST00000366286 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
YBX3-203ENST00000366286 CYSTM1Q9H1C7 97 aa4.09□□□□□ -1.75
YBX3-203ENST00000366286 H7BZZ5 65 aa4.07□□□□□ -1.76
YBX3-203ENST00000366286 CAMK2N1Q7Z7J9 78 aa4.05□□□□□ -1.76
YBX3-203ENST00000366286 SEC61GP60059 68 aa4.04□□□□□ -1.76
YBX3-203ENST00000366286 SERP1Q9Y6X1 66 aa4.04□□□□□ -1.76
YBX3-203ENST00000366286 SPRR2DP22532 72 aa4.03□□□□□ -1.76
YBX3-203ENST00000366286 A0A0D9SG42 100 aa4.01□□□□□ -1.77
YBX3-203ENST00000366286 SPATA8Q6RVD6 105 aa4□□□□□ -1.77
YBX3-203ENST00000366286 A0A1B0GU33 70 aa3.98□□□□□ -1.77
YBX3-203ENST00000366286 ANAPC13Q9BS18 74 aa3.98□□□□□ -1.77
YBX3-203ENST00000366286 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
YBX3-203ENST00000366286 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
YBX3-203ENST00000366286 KRTAP2-1Q9BYU5 128 aa3.96□□□□□ -1.78
YBX3-203ENST00000366286 SPINT4Q6UDR6 99 aa3.95□□□□□ -1.78
YBX3-203ENST00000366286 KRTAP12-1P59990 96 aa3.94□□□□□ -1.78
YBX3-203ENST00000366286 A0A1B0GU69 56 aa3.92□□□□□ -1.78
YBX3-203ENST00000366286 CCDC179H3BU77 68 aa3.91□□□□□ -1.78
YBX3-203ENST00000366286 KRTAP19-7Q3SYF9 63 aa3.9□□□□□ -1.79
YBX3-203ENST00000366286 SMIM26A0A096LP01 95 aa3.87□□□□□ -1.79
YBX3-203ENST00000366286 A8MU10 97 aa3.86□□□□□ -1.79
YBX3-203ENST00000366286 MT1EP04732 61 aa3.86□□□□□ -1.79
YBX3-203ENST00000366286 ATP5EP56381 51 aaPredicted RBP3.85□□□□□ -1.79
YBX3-203ENST00000366286 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
YBX3-203ENST00000366286 KRTAP19-3Q7Z4W3 81 aa3.83□□□□□ -1.8
YBX3-203ENST00000366286 KRTAP19-5Q3LI72 72 aa3.8□□□□□ -1.8
YBX3-203ENST00000366286 PRR15LQ9BU68 103 aa3.8□□□□□ -1.8
YBX3-203ENST00000366286 LINC01558Q9Y6Z2 57 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 1140.2 ms