RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 TSC22D3Q99576 134 aa-2.14□□□□□ -2.75
MIR539-201ENST00000365690 NALCNQ8IZF0 1738 aa-2.14□□□□□ -2.75
MIR539-201ENST00000365690 DLEU1O43261 78 aa-2.15□□□□□ -2.75
MIR539-201ENST00000365690 ENHOQ6UWT2 76 aa-2.15□□□□□ -2.75
MIR539-201ENST00000365690 C2orf88Q9BSF0 95 aa-2.15□□□□□ -2.75
MIR539-201ENST00000365690 NDUFA2O43678 99 aa-2.16□□□□□ -2.76
MIR539-201ENST00000365690 LINC00643Q86TS7 51 aa-2.16□□□□□ -2.76
MIR539-201ENST00000365690 SNRPFP62306 86 aaKnown RBP-2.17□□□□□ -2.76
MIR539-201ENST00000365690 CFAP47Q6ZTR5 3102 aa-2.17□□□□□ -2.76
MIR539-201ENST00000365690 ABCC6O95255 1503 aa-2.17□□□□□ -2.76
MIR539-201ENST00000365690 DNAH14Q0VDD8 3507 aa-2.18□□□□□ -2.76
MIR539-201ENST00000365690 TTC37Q6PGP7 1564 aa-2.18□□□□□ -2.76
MIR539-201ENST00000365690 ATP5EP2Q5VTU8 51 aa-2.18□□□□□ -2.76
MIR539-201ENST00000365690 ANKRD26Q9UPS8 1709 aa-2.18□□□□□ -2.76
MIR539-201ENST00000365690 EIF2AK4Q9P2K8 1649 aaKnown RBP-2.18□□□□□ -2.76
MIR539-201ENST00000365690 GLI2P10070 1586 aa-2.19□□□□□ -2.76
MIR539-201ENST00000365690 MKI67P46013 3256 aaKnown RBP-2.19□□□□□ -2.76
MIR539-201ENST00000365690 SMIM13P0DJ93 91 aa-2.19□□□□□ -2.76
MIR539-201ENST00000365690 S100A10P60903 97 aa-2.19□□□□□ -2.76
MIR539-201ENST00000365690 KRTAP19-2Q3LHN2 52 aa-2.19□□□□□ -2.76
MIR539-201ENST00000365690 GNG8Q9UK08 70 aa-2.19□□□□□ -2.76
MIR539-201ENST00000365690 CFAP43Q8NDM7 1665 aa-2.19□□□□□ -2.76
MIR539-201ENST00000365690 UNC13AQ9UPW8 1703 aa-2.2□□□□□ -2.76
MIR539-201ENST00000365690 MYO3AQ8NEV4 1616 aa-2.2□□□□□ -2.76
MIR539-201ENST00000365690 GYPAP02724 150 aa-2.2□□□□□ -2.76
MIR539-201ENST00000365690 DEFB114Q30KQ6 69 aa-2.2□□□□□ -2.76
MIR539-201ENST00000365690 A0A1B0GV90 55 aa-2.21□□□□□ -2.76
MIR539-201ENST00000365690 DIP2AQ14689 1571 aa-2.21□□□□□ -2.76
MIR539-201ENST00000365690 NMES1Q9C002 83 aa-2.21□□□□□ -2.76
MIR539-201ENST00000365690 AKAP12Q02952 1782 aa-2.21□□□□□ -2.76
MIR539-201ENST00000365690 NRXN3Q9Y4C0 1643 aa-2.21□□□□□ -2.76
MIR539-201ENST00000365690 NHSQ6T4R5 1651 aa-2.22□□□□□ -2.76
MIR539-201ENST00000365690 DEFB131AP59861 70 aa-2.22□□□□□ -2.76
MIR539-201ENST00000365690 C3P01024 1663 aa-2.22□□□□□ -2.77
MIR539-201ENST00000365690 MROH1Q8NDA8 1641 aa-2.23□□□□□ -2.77
MIR539-201ENST00000365690 DEFB133Q30KQ1 61 aa-2.23□□□□□ -2.77
MIR539-201ENST00000365690 NCMAPQ5T1S8 102 aa-2.24□□□□□ -2.77
MIR539-201ENST00000365690 LINC00308Q8TCZ7 52 aa-2.24□□□□□ -2.77
MIR539-201ENST00000365690 TMEM167BQ9NRX6 74 aa-2.24□□□□□ -2.77
MIR539-201ENST00000365690 KDM5DQ9BY66 1539 aa-2.24□□□□□ -2.77
MIR539-201ENST00000365690 TIAM1Q13009 1591 aa-2.24□□□□□ -2.77
MIR539-201ENST00000365690 CD52P31358 61 aa-2.25□□□□□ -2.77
MIR539-201ENST00000365690 KANTRA0A1W2PQU2 76 aa-2.26□□□□□ -2.77
MIR539-201ENST00000365690 UNC80Q8N2C7 3258 aa-2.26□□□□□ -2.77
MIR539-201ENST00000365690 CEP162Q5TB80 1403 aa-2.26□□□□□ -2.77
MIR539-201ENST00000365690 LOC105371267A0A1B0GV96 52 aa-2.27□□□□□ -2.77
MIR539-201ENST00000365690 S100A16Q96FQ6 103 aaKnown RBP-2.28□□□□□ -2.77
MIR539-201ENST00000365690 SCRIBQ14160 1630 aa-2.28□□□□□ -2.77
MIR539-201ENST00000365690 MADDQ8WXG6 1647 aa-2.28□□□□□ -2.77
MIR539-201ENST00000365690 H3BVH4 76 aa-2.29□□□□□ -2.78
MIR539-201ENST00000365690 DEFB121Q5J5C9 76 aa-2.29□□□□□ -2.78
MIR539-201ENST00000365690 PYY3Q5JQD4 70 aa-2.29□□□□□ -2.78
MIR539-201ENST00000365690 DNAH12Q6ZR08 3092 aa-2.29□□□□□ -2.78
MIR539-201ENST00000365690 LMTK2Q8IWU2 1503 aa-2.3□□□□□ -2.78
MIR539-201ENST00000365690 K7EMI3 77 aa-2.3□□□□□ -2.78
MIR539-201ENST00000365690 LOC400499M0QZD8 3231 aa-2.3□□□□□ -2.78
MIR539-201ENST00000365690 CCDC180Q9P1Z9 1646 aa-2.31□□□□□ -2.78
MIR539-201ENST00000365690 USP34Q70CQ2 3546 aa-2.31□□□□□ -2.78
MIR539-201ENST00000365690 HMGN1P05114 100 aa-2.31□□□□□ -2.78
MIR539-201ENST00000365690 HTN1P15515 57 aa-2.31□□□□□ -2.78
MIR539-201ENST00000365690 TCEAL7Q9BRU2 100 aa-2.31□□□□□ -2.78
MIR539-201ENST00000365690 RHPN1-AS1Q9BWJ2 59 aa-2.31□□□□□ -2.78
MIR539-201ENST00000365690 LMO7Q8WWI1 1683 aa-2.31□□□□□ -2.78
MIR539-201ENST00000365690 ANKARQ7Z5J8 1434 aa-2.32□□□□□ -2.78
MIR539-201ENST00000365690 VPS8Q8N3P4 1428 aa-2.33□□□□□ -2.78
MIR539-201ENST00000365690 SMIM2Q9BVW6 85 aa-2.33□□□□□ -2.78
MIR539-201ENST00000365690 ATXN8Q156A1 80 aa-2.34□□□□□ -2.78
MIR539-201ENST00000365690 EFCAB6Q5THR3 1501 aa-2.35□□□□□ -2.79
MIR539-201ENST00000365690 VCANP13611 3396 aa-2.35□□□□□ -2.79
MIR539-201ENST00000365690 S100A12P80511 92 aa-2.35□□□□□ -2.79
MIR539-201ENST00000365690 SNHG12Q9BXW3 62 aa-2.35□□□□□ -2.79
MIR539-201ENST00000365690 MROH2AA6NES4 1674 aa-2.35□□□□□ -2.79
MIR539-201ENST00000365690 M0R1W7 72 aa-2.36□□□□□ -2.79
MIR539-201ENST00000365690 ALS2Q96Q42 1657 aa-2.37□□□□□ -2.79
MIR539-201ENST00000365690 H3BUT2 72 aa-2.37□□□□□ -2.79
MIR539-201ENST00000365690 CNTLNQ9NXG0 1405 aa-2.37□□□□□ -2.79
MIR539-201ENST00000365690 A0A096LNI7 61 aa-2.38□□□□□ -2.79
MIR539-201ENST00000365690 CENPFP49454 3210 aa-2.38□□□□□ -2.79
MIR539-201ENST00000365690 SERF2P84101 59 aa-2.38□□□□□ -2.79
MIR539-201ENST00000365690 S100ZQ8WXG8 99 aa-2.38□□□□□ -2.79
MIR539-201ENST00000365690 ABCC3O15438 1527 aa-2.39□□□□□ -2.79
MIR539-201ENST00000365690 EFCAB10A6NFE3 127 aa-2.4□□□□□ -2.79
MIR539-201ENST00000365690 LINC00587B1AMM8 73 aa-2.4□□□□□ -2.79
MIR539-201ENST00000365690 ATP6V1G2-DDX39BF2Z307 99 aa-2.4□□□□□ -2.79
MIR539-201ENST00000365690 M0R143 59 aa-2.4□□□□□ -2.79
MIR539-201ENST00000365690 Q9H521 79 aa-2.4□□□□□ -2.79
MIR539-201ENST00000365690 ADIRFQ15847 76 aa-2.41□□□□□ -2.8
MIR539-201ENST00000365690 C14orf144Q96I85 54 aa-2.41□□□□□ -2.8
MIR539-201ENST00000365690 ASPMQ8IZT6 3477 aa-2.41□□□□□ -2.8
MIR539-201ENST00000365690 LINC01590Q5TEZ4 76 aa-2.42□□□□□ -2.8
MIR539-201ENST00000365690 ST20Q9HBF5 79 aa-2.42□□□□□ -2.8
MIR539-201ENST00000365690 GNG13Q9P2W3 67 aa-2.42□□□□□ -2.8
MIR539-201ENST00000365690 XIRP2A4UGR9 3374 aa-2.42□□□□□ -2.8
MIR539-201ENST00000365690 H0YGX0 51 aa-2.43□□□□□ -2.8
MIR539-201ENST00000365690 TFF3Q07654 80 aa-2.43□□□□□ -2.8
MIR539-201ENST00000365690 TDRG1Q3Y452 100 aa-2.43□□□□□ -2.8
MIR539-201ENST00000365690 SYCP2Q9BX26 1530 aa-2.44□□□□□ -2.8
MIR539-201ENST00000365690 CDH23Q9H251 3354 aa-2.45□□□□□ -2.8
MIR539-201ENST00000365690 ABCC1P33527 1531 aa-2.46□□□□□ -2.8
MIR539-201ENST00000365690 LINC01549A6NIU2 74 aa-2.46□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms