RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 SIGMAR1Q99720 223 aa2.07□□□□□ -2.08
RNU4-39P-201ENST00000362455 LINC00472Q9H8W2 130 aa2.07□□□□□ -2.08
RNU4-39P-201ENST00000362455 KRTAP2-3P0C7H8 128 aa2.06□□□□□ -2.08
RNU4-39P-201ENST00000362455 COPS9Q8WXC6 57 aa2.06□□□□□ -2.08
RNU4-39P-201ENST00000362455 KRTAP2-4Q9BYR9 128 aa2.06□□□□□ -2.08
RNU4-39P-201ENST00000362455 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
RNU4-39P-201ENST00000362455 A6NN06 94 aa2.05□□□□□ -2.08
RNU4-39P-201ENST00000362455 FXYD2P54710 66 aa2.05□□□□□ -2.08
RNU4-39P-201ENST00000362455 KRTDAPP60985 99 aa2.05□□□□□ -2.08
RNU4-39P-201ENST00000362455 C7orf65Q6ZTY9 151 aa2.05□□□□□ -2.08
RNU4-39P-201ENST00000362455 C12orf57Q99622 126 aa2.05□□□□□ -2.08
RNU4-39P-201ENST00000362455 H3BMG7 143 aa2.04□□□□□ -2.08
RNU4-39P-201ENST00000362455 WFDC13Q8IUB5 93 aa2.04□□□□□ -2.08
RNU4-39P-201ENST00000362455 KRTAP19-8Q3LI54 63 aa2.03□□□□□ -2.08
RNU4-39P-201ENST00000362455 BVES-AS1Q5T3Y7 98 aa2.03□□□□□ -2.08
RNU4-39P-201ENST00000362455 TRBV7-4A0A0J9YYF1 115 aa2.02□□□□□ -2.09
RNU4-39P-201ENST00000362455 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
RNU4-39P-201ENST00000362455 A0A1B0GV72 72 aa2.01□□□□□ -2.09
RNU4-39P-201ENST00000362455 FABP2P12104 132 aa2.01□□□□□ -2.09
RNU4-39P-201ENST00000362455 Q1T7F1 81 aa2.01□□□□□ -2.09
RNU4-39P-201ENST00000362455 H1FX-AS1Q4G0G2 97 aa2.01□□□□□ -2.09
RNU4-39P-201ENST00000362455 RAB37Q96AX2 223 aa2.01□□□□□ -2.09
RNU4-39P-201ENST00000362455 SPRR2GQ9BYE4 73 aa2□□□□□ -2.09
RNU4-39P-201ENST00000362455 H0YGX0 51 aa1.99□□□□□ -2.09
RNU4-39P-201ENST00000362455 Q5VV11 94 aa1.99□□□□□ -2.09
RNU4-39P-201ENST00000362455 CCKP06307 115 aa1.98□□□□□ -2.09
RNU4-39P-201ENST00000362455 KRTAP2-1Q9BYU5 128 aa1.98□□□□□ -2.09
RNU4-39P-201ENST00000362455 A0A1B0GX51 115 aa1.97□□□□□ -2.09
RNU4-39P-201ENST00000362455 SPRR2EP22531 72 aa1.97□□□□□ -2.09
RNU4-39P-201ENST00000362455 SPRR2BP35325 72 aa1.97□□□□□ -2.09
RNU4-39P-201ENST00000362455 SPRR2AP35326 72 aa1.97□□□□□ -2.09
RNU4-39P-201ENST00000362455 HIST1H2BLQ99880 126 aa1.97□□□□□ -2.09
RNU4-39P-201ENST00000362455 NAA38Q9BRA0 125 aaKnown RBP1.97□□□□□ -2.09
RNU4-39P-201ENST00000362455 IGKV3D-7A0A0C4DH55 119 aa1.96□□□□□ -2.1
RNU4-39P-201ENST00000362455 TRACP01848 142 aa1.96□□□□□ -2.1
RNU4-39P-201ENST00000362455 COX8AP10176 69 aa1.96□□□□□ -2.1
RNU4-39P-201ENST00000362455 HIST3H2BBQ8N257 126 aa1.96□□□□□ -2.1
RNU4-39P-201ENST00000362455 SPRR2FQ96RM1 72 aa1.96□□□□□ -2.1
RNU4-39P-201ENST00000362455 DLEU1O43261 78 aa1.94□□□□□ -2.1
RNU4-39P-201ENST00000362455 SNCGO76070 127 aa1.94□□□□□ -2.1
RNU4-39P-201ENST00000362455 Q6ZQT0 140 aa1.94□□□□□ -2.1
RNU4-39P-201ENST00000362455 C14orf144Q96I85 54 aa1.94□□□□□ -2.1
RNU4-39P-201ENST00000362455 ORMDL1Q9P0S3 153 aa1.94□□□□□ -2.1
RNU4-39P-201ENST00000362455 PRO1854Q9UHT4 67 aa1.94□□□□□ -2.1
RNU4-39P-201ENST00000362455 J3KT08 172 aa1.93□□□□□ -2.1
RNU4-39P-201ENST00000362455 TMEM256-PLSCR3K7ERE1 68 aa1.93□□□□□ -2.1
RNU4-39P-201ENST00000362455 RBM3P98179 157 aaKnown RBP1.93□□□□□ -2.1
RNU4-39P-201ENST00000362455 VPS25Q9BRG1 176 aa1.93□□□□□ -2.1
RNU4-39P-201ENST00000362455 HIGD1BQ9P298 99 aa1.93□□□□□ -2.1
RNU4-39P-201ENST00000362455 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
RNU4-39P-201ENST00000362455 MMP24-AS1A0A0U1RRL7 71 aa1.92□□□□□ -2.1
RNU4-39P-201ENST00000362455 FAM236AA0A1B0GUQ0 79 aa1.92□□□□□ -2.1
RNU4-39P-201ENST00000362455 FAM236BA0A1B0GV22 79 aa1.92□□□□□ -2.1
RNU4-39P-201ENST00000362455 LYRM7Q5U5X0 104 aa1.92□□□□□ -2.1
RNU4-39P-201ENST00000362455 K7ERJ3 54 aa1.91□□□□□ -2.1
RNU4-39P-201ENST00000362455 NDUFB1O75438 58 aa1.91□□□□□ -2.1
RNU4-39P-201ENST00000362455 MT1XP80297 61 aa1.91□□□□□ -2.1
RNU4-39P-201ENST00000362455 KLKP1Q107X0 134 aa1.91□□□□□ -2.1
RNU4-39P-201ENST00000362455 LINC01554Q52M75 96 aa1.91□□□□□ -2.1
RNU4-39P-201ENST00000362455 PRR15Q8IV56 129 aa1.91□□□□□ -2.1
RNU4-39P-201ENST00000362455 SPRR2DP22532 72 aa1.9□□□□□ -2.11
RNU4-39P-201ENST00000362455 LCA10Q71F78 164 aa1.9□□□□□ -2.11
RNU4-39P-201ENST00000362455 TMEM254Q8TBM7 123 aa1.9□□□□□ -2.11
RNU4-39P-201ENST00000362455 MRPL34Q9BQ48 92 aaKnown RBP1.9□□□□□ -2.11
RNU4-39P-201ENST00000362455 DNAL4O96015 105 aa1.89□□□□□ -2.11
RNU4-39P-201ENST00000362455 KRTAP8-1Q8IUC2 63 aa1.89□□□□□ -2.11
RNU4-39P-201ENST00000362455 DSCR8Q96T75 97 aa1.89□□□□□ -2.11
RNU4-39P-201ENST00000362455 C9JAW5 83 aa1.88□□□□□ -2.11
RNU4-39P-201ENST00000362455 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
RNU4-39P-201ENST00000362455 BAALC-AS2P0C853 105 aa1.88□□□□□ -2.11
RNU4-39P-201ENST00000362455 SPATA45Q537H7 98 aa1.88□□□□□ -2.11
RNU4-39P-201ENST00000362455 CSAG1Q6PB30 78 aa1.88□□□□□ -2.11
RNU4-39P-201ENST00000362455 CYSTM1Q9H1C7 97 aa1.88□□□□□ -2.11
RNU4-39P-201ENST00000362455 A0A087WVE0 104 aa1.87□□□□□ -2.11
RNU4-39P-201ENST00000362455 hDV103S1A0JD37 113 aa1.87□□□□□ -2.11
RNU4-39P-201ENST00000362455 K7EQZ3 153 aa1.87□□□□□ -2.11
RNU4-39P-201ENST00000362455 IMUPQ9GZP8 106 aa1.87□□□□□ -2.11
RNU4-39P-201ENST00000362455 S4R3F8 94 aa1.87□□□□□ -2.11
RNU4-39P-201ENST00000362455 LOC110117498A0A087WWA1 95 aa1.86□□□□□ -2.11
RNU4-39P-201ENST00000362455 COX6CP09669 75 aa1.84□□□□□ -2.11
RNU4-39P-201ENST00000362455 NREPQ16612 68 aa1.84□□□□□ -2.11
RNU4-39P-201ENST00000362455 C14orf132Q9NPU4 83 aa1.84□□□□□ -2.11
RNU4-39P-201ENST00000362455 HCG22E2RYF7 251 aa1.83□□□□□ -2.12
RNU4-39P-201ENST00000362455 HSD52Q0P140 79 aa1.83□□□□□ -2.12
RNU4-39P-201ENST00000362455 VAMP8Q9BV40 100 aa1.83□□□□□ -2.12
RNU4-39P-201ENST00000362455 CRIPTQ9P021 101 aa1.83□□□□□ -2.12
RNU4-39P-201ENST00000362455 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
RNU4-39P-201ENST00000362455 JMJD7-PLA2G4BH0Y9G9 81 aa1.81□□□□□ -2.12
RNU4-39P-201ENST00000362455 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
RNU4-39P-201ENST00000362455 LOC105371267A0A1B0GV96 52 aa1.8□□□□□ -2.12
RNU4-39P-201ENST00000362455 PDE6GP18545 87 aa1.8□□□□□ -2.12
RNU4-39P-201ENST00000362455 PYY3Q5JQD4 70 aa1.8□□□□□ -2.12
RNU4-39P-201ENST00000362455 CASC2Q6XLA1 102 aa1.8□□□□□ -2.12
RNU4-39P-201ENST00000362455 AHNAK2Q8IVF2 5795 aa1.8□□□□□ -2.12
RNU4-39P-201ENST00000362455 H0YAA0 97 aa1.78□□□□□ -2.12
RNU4-39P-201ENST00000362455 ATXN8Q156A1 80 aa1.78□□□□□ -2.12
RNU4-39P-201ENST00000362455 S100A1P23297 94 aa1.77□□□□□ -2.13
RNU4-39P-201ENST00000362455 PLAC4Q8WY50 150 aa1.76□□□□□ -2.13
RNU4-39P-201ENST00000362455 CYP4F30PQ9H0H9 118 aa1.76□□□□□ -2.13
RNU4-39P-201ENST00000362455 UQCR10Q9UDW1 63 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 1351 ms