RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 ZCCHC13Q8WW36 166 aaKnown RBP5.71□□□□□ -1.5
SNX6-201ENST00000362031 LINC01554Q52M75 96 aa5.7□□□□□ -1.5
SNX6-201ENST00000362031 LOC101927531A0A1B0GV80 90 aa5.7□□□□□ -1.5
SNX6-201ENST00000362031 A8MU10 97 aa5.7□□□□□ -1.5
SNX6-201ENST00000362031 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
SNX6-201ENST00000362031 Q5W150 140 aa5.68□□□□□ -1.5
SNX6-201ENST00000362031 FAT4Q6V0I7 4981 aa5.65□□□□□ -1.5
SNX6-201ENST00000362031 SEC61BP60468 96 aaKnown RBP5.65□□□□□ -1.51
SNX6-201ENST00000362031 A6NED7 52 aa5.64□□□□□ -1.51
SNX6-201ENST00000362031 MP68P56378 58 aa5.64□□□□□ -1.51
SNX6-201ENST00000362031 SPANXA2-OT1Q8N9U9 137 aa5.63□□□□□ -1.51
SNX6-201ENST00000362031 PRR15LQ9BU68 103 aa5.63□□□□□ -1.51
SNX6-201ENST00000362031 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
SNX6-201ENST00000362031 KRTAP4-6Q9BYQ5 205 aa5.62□□□□□ -1.51
SNX6-201ENST00000362031 LINC00208Q96KT6 92 aa5.59□□□□□ -1.51
SNX6-201ENST00000362031 TP53AIP1Q9HCN2 124 aa5.57□□□□□ -1.52
SNX6-201ENST00000362031 H3BPC8 53 aa5.55□□□□□ -1.52
SNX6-201ENST00000362031 SPINK7P58062 85 aa5.55□□□□□ -1.52
SNX6-201ENST00000362031 LINC01558Q9Y6Z2 57 aa5.53□□□□□ -1.52
SNX6-201ENST00000362031 IGKV2D-30A0A075B6S6 120 aa5.53□□□□□ -1.52
SNX6-201ENST00000362031 IGKV2-30P06310 120 aa5.53□□□□□ -1.52
SNX6-201ENST00000362031 KRTAP19-2Q3LHN2 52 aa5.52□□□□□ -1.53
SNX6-201ENST00000362031 H0Y9P7 68 aa5.51□□□□□ -1.53
SNX6-201ENST00000362031 HRES1P13985 223 aa5.51□□□□□ -1.53
SNX6-201ENST00000362031 FLGP20930 4061 aaPredicted RBP5.49□□□□□ -1.53
SNX6-201ENST00000362031 PRAC1Q96KF2 57 aa5.46□□□□□ -1.54
SNX6-201ENST00000362031 COA5Q86WW8 74 aa5.43□□□□□ -1.54
SNX6-201ENST00000362031 KRTAP3-1Q9BYR8 98 aa5.4□□□□□ -1.54
SNX6-201ENST00000362031 A0A0A0MQY5 61 aa5.38□□□□□ -1.55
SNX6-201ENST00000362031 ADM2Q7Z4H4 148 aa5.36□□□□□ -1.55
SNX6-201ENST00000362031 COX6B2Q6YFQ2 88 aa5.36□□□□□ -1.55
SNX6-201ENST00000362031 MT1HP80294 61 aa5.34□□□□□ -1.55
SNX6-201ENST00000362031 ROMO1P60602 79 aa5.3□□□□□ -1.56
SNX6-201ENST00000362031 CSAG1Q6PB30 78 aa5.3□□□□□ -1.56
SNX6-201ENST00000362031 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
SNX6-201ENST00000362031 H1FX-AS1Q4G0G2 97 aa5.28□□□□□ -1.56
SNX6-201ENST00000362031 DMAC1Q96GE9 116 aa5.23□□□□□ -1.57
SNX6-201ENST00000362031 M0R2T5 61 aa5.2□□□□□ -1.58
SNX6-201ENST00000362031 MIR22HGQ0VDD5 57 aa5.18□□□□□ -1.58
SNX6-201ENST00000362031 S4R3F8 94 aa5.18□□□□□ -1.58
SNX6-201ENST00000362031 UQCR11O14957 56 aa5.16□□□□□ -1.58
SNX6-201ENST00000362031 KRTAP10-6P60371 365 aaPredicted RBP5.16□□□□□ -1.58
SNX6-201ENST00000362031 KRTAP25-1Q3LHN0 102 aa5.16□□□□□ -1.58
SNX6-201ENST00000362031 KRTAP4-8Q9BYQ9 185 aa5.14□□□□□ -1.59
SNX6-201ENST00000362031 KRTAP9-8Q9BYQ0 159 aa5.13□□□□□ -1.59
SNX6-201ENST00000362031 A0A1B0GU69 56 aa5.12□□□□□ -1.59
SNX6-201ENST00000362031 ACYP2P14621 99 aa5.12□□□□□ -1.59
SNX6-201ENST00000362031 P0C880 135 aa5.09□□□□□ -1.59
SNX6-201ENST00000362031 MT2AP02795 61 aa5.07□□□□□ -1.6
SNX6-201ENST00000362031 MT1FP04733 61 aa5.06□□□□□ -1.6
SNX6-201ENST00000362031 KRTAP9-2Q9BYQ4 174 aa5.02□□□□□ -1.61
SNX6-201ENST00000362031 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.01□□□□□ -1.61
SNX6-201ENST00000362031 FSIP2Q5CZC0 6907 aa4.99□□□□□ -1.61
SNX6-201ENST00000362031 KRTAP9-6A0A140TA67 174 aa4.99□□□□□ -1.61
SNX6-201ENST00000362031 KRTAP10-10P60014 251 aa4.99□□□□□ -1.61
SNX6-201ENST00000362031 USH2AO75445 5202 aa4.98□□□□□ -1.61
SNX6-201ENST00000362031 KRTAP9-3Q9BYQ3 159 aa4.94□□□□□ -1.62
SNX6-201ENST00000362031 H0YAA0 97 aa4.94□□□□□ -1.62
SNX6-201ENST00000362031 K7ERS5 55 aa4.9□□□□□ -1.63
SNX6-201ENST00000362031 KRTAP4-12Q9BQ66 201 aa4.9□□□□□ -1.63
SNX6-201ENST00000362031 NDUFAF8A1L188 74 aa4.89□□□□□ -1.63
SNX6-201ENST00000362031 LCE3BQ5TA77 95 aa4.88□□□□□ -1.63
SNX6-201ENST00000362031 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
SNX6-201ENST00000362031 SSPOA2VEC9 5147 aa4.87□□□□□ -1.63
SNX6-201ENST00000362031 LUZP6Q538Z0 58 aa4.87□□□□□ -1.63
SNX6-201ENST00000362031 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
SNX6-201ENST00000362031 SPINT4Q6UDR6 99 aa4.83□□□□□ -1.64
SNX6-201ENST00000362031 SPRR2GQ9BYE4 73 aa4.82□□□□□ -1.64
SNX6-201ENST00000362031 KRTAP13-4Q3LI77 160 aa4.79□□□□□ -1.64
SNX6-201ENST00000362031 CRIPTQ9P021 101 aa4.77□□□□□ -1.65
SNX6-201ENST00000362031 KRTAP9-9Q9BYP9 154 aa4.77□□□□□ -1.65
SNX6-201ENST00000362031 KRTAP9-4Q9BYQ2 154 aa4.77□□□□□ -1.65
SNX6-201ENST00000362031 M0QZ58 72 aa4.76□□□□□ -1.65
SNX6-201ENST00000362031 R4GN34 69 aa4.76□□□□□ -1.65
SNX6-201ENST00000362031 MT1BP07438 61 aa4.73□□□□□ -1.65
SNX6-201ENST00000362031 KRTAP19-8Q3LI54 63 aa4.73□□□□□ -1.65
SNX6-201ENST00000362031 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
SNX6-201ENST00000362031 A0A1B0GU33 70 aa4.71□□□□□ -1.66
SNX6-201ENST00000362031 FCGBPQ9Y6R7 5405 aaPredicted RBP4.66□□□□□ -1.66
SNX6-201ENST00000362031 A0A0D9SG42 100 aa4.63□□□□□ -1.67
SNX6-201ENST00000362031 CRCT1Q9UGL9 99 aa4.61□□□□□ -1.67
SNX6-201ENST00000362031 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
SNX6-201ENST00000362031 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
SNX6-201ENST00000362031 KRTAP19-6Q3LI70 58 aa4.56□□□□□ -1.68
SNX6-201ENST00000362031 CAMK2N1Q7Z7J9 78 aa4.56□□□□□ -1.68
SNX6-201ENST00000362031 KRTAP12-2P59991 146 aa4.55□□□□□ -1.68
SNX6-201ENST00000362031 KRTAP12-1P59990 96 aa4.54□□□□□ -1.68
SNX6-201ENST00000362031 PLAC4Q8WY50 150 aa4.54□□□□□ -1.68
SNX6-201ENST00000362031 MT1XP80297 61 aa4.52□□□□□ -1.69
SNX6-201ENST00000362031 KRTAP10-5P60370 271 aa4.51□□□□□ -1.69
SNX6-201ENST00000362031 KMT2DO14686 5537 aa4.48□□□□□ -1.69
SNX6-201ENST00000362031 MACF1Q9UPN3 7388 aaKnown RBP4.47□□□□□ -1.69
SNX6-201ENST00000362031 KRTAP4-9Q9BYQ8 210 aa4.46□□□□□ -1.7
SNX6-201ENST00000362031 SYNE2Q8WXH0 6885 aaKnown RBP4.45□□□□□ -1.7
SNX6-201ENST00000362031 C10orf95Q9H7T3 257 aa4.43□□□□□ -1.7
SNX6-201ENST00000362031 PRO2289Q9P1D8 64 aa4.38□□□□□ -1.71
SNX6-201ENST00000362031 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
SNX6-201ENST00000362031 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
SNX6-201ENST00000362031 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
SNX6-201ENST00000362031 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms