RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 S4R3F8 94 aa8.92□□□□□ -0.98
CCDC7-203ENST00000362006 LCE2CQ5TA81 110 aa8.87□□□□□ -0.99
CCDC7-203ENST00000362006 SPTSSBQ8NFR3 76 aa8.87□□□□□ -0.99
CCDC7-203ENST00000362006 LCA10Q71F78 164 aa8.86□□□□□ -0.99
CCDC7-203ENST00000362006 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
CCDC7-203ENST00000362006 CSAG1Q6PB30 78 aa8.78□□□□□ -1
CCDC7-203ENST00000362006 FLGP20930 4061 aaPredicted RBP8.78□□□□□ -1
CCDC7-203ENST00000362006 SMIM26A0A096LP01 95 aa8.76□□□□□ -1.01
CCDC7-203ENST00000362006 MT1HP80294 61 aa8.72□□□□□ -1.01
CCDC7-203ENST00000362006 FAT4Q6V0I7 4981 aa8.72□□□□□ -1.01
CCDC7-203ENST00000362006 PRO0628Q9UI54 55 aa8.69□□□□□ -1.02
CCDC7-203ENST00000362006 M0R2T5 61 aa8.66□□□□□ -1.02
CCDC7-203ENST00000362006 V9GYY9 64 aa8.62□□□□□ -1.03
CCDC7-203ENST00000362006 LINC01558Q9Y6Z2 57 aa8.59□□□□□ -1.03
CCDC7-203ENST00000362006 H0YAA0 97 aa8.57□□□□□ -1.04
CCDC7-203ENST00000362006 Q1T7F1 81 aa8.57□□□□□ -1.04
CCDC7-203ENST00000362006 SEC61GP60059 68 aa8.56□□□□□ -1.04
CCDC7-203ENST00000362006 LCE2AQ5TA79 106 aaPredicted RBP8.52□□□□□ -1.05
CCDC7-203ENST00000362006 A0A1B0GU69 56 aa8.51□□□□□ -1.05
CCDC7-203ENST00000362006 PRR15LQ9BU68 103 aa8.51□□□□□ -1.05
CCDC7-203ENST00000362006 BRK1Q8WUW1 75 aa8.49□□□□□ -1.05
CCDC7-203ENST00000362006 ADM2Q7Z4H4 148 aa8.48□□□□□ -1.05
CCDC7-203ENST00000362006 KRTAP10-6P60371 365 aaPredicted RBP8.44□□□□□ -1.06
CCDC7-203ENST00000362006 KRTAP3-2Q9BYR7 98 aa8.44□□□□□ -1.06
CCDC7-203ENST00000362006 LORP23490 312 aaPredicted RBP8.39□□□□□ -1.07
CCDC7-203ENST00000362006 PSPHP1O15172 72 aa8.38□□□□□ -1.07
CCDC7-203ENST00000362006 P0C880 135 aa8.38□□□□□ -1.07
CCDC7-203ENST00000362006 KRTAP9-8Q9BYQ0 159 aa8.37□□□□□ -1.07
CCDC7-203ENST00000362006 MT2AP02795 61 aa8.33□□□□□ -1.08
CCDC7-203ENST00000362006 A0A1B0GU33 70 aa8.32□□□□□ -1.08
CCDC7-203ENST00000362006 Q5VV11 94 aa8.31□□□□□ -1.08
CCDC7-203ENST00000362006 CRIPTQ9P021 101 aa8.3□□□□□ -1.08
CCDC7-203ENST00000362006 KRTAP10-10P60014 251 aa8.28□□□□□ -1.08
CCDC7-203ENST00000362006 MT1FP04733 61 aa8.26□□□□□ -1.09
CCDC7-203ENST00000362006 M0QZ58 72 aa8.24□□□□□ -1.09
CCDC7-203ENST00000362006 UQCR11O14957 56 aa8.24□□□□□ -1.09
CCDC7-203ENST00000362006 R4GN34 69 aa8.23□□□□□ -1.09
CCDC7-203ENST00000362006 A6NED7 52 aa8.16□□□□□ -1.1
CCDC7-203ENST00000362006 PMAIP1Q13794 54 aa8.15□□□□□ -1.1
CCDC7-203ENST00000362006 KRTAP13-4Q3LI77 160 aa8.12□□□□□ -1.11
CCDC7-203ENST00000362006 SPATA8Q6RVD6 105 aa8.12□□□□□ -1.11
CCDC7-203ENST00000362006 MIR22HGQ0VDD5 57 aa8.11□□□□□ -1.11
CCDC7-203ENST00000362006 SPRR2GQ9BYE4 73 aa8.11□□□□□ -1.11
CCDC7-203ENST00000362006 A8MU10 97 aa8.1□□□□□ -1.11
CCDC7-203ENST00000362006 KRTAP9-3Q9BYQ3 159 aa8.08□□□□□ -1.12
CCDC7-203ENST00000362006 KRTAP19-1Q8IUB9 90 aa8.06□□□□□ -1.12
CCDC7-203ENST00000362006 LINC01554Q52M75 96 aa8.01□□□□□ -1.13
CCDC7-203ENST00000362006 CDC42SE1Q9NRR8 79 aa8□□□□□ -1.13
CCDC7-203ENST00000362006 A0A0D9SG42 100 aa7.98□□□□□ -1.13
CCDC7-203ENST00000362006 A6NN06 94 aa7.95□□□□□ -1.14
CCDC7-203ENST00000362006 KTN1-AS1Q86SY8 53 aa7.94□□□□□ -1.14
CCDC7-203ENST00000362006 KRTAP19-8Q3LI54 63 aa7.93□□□□□ -1.14
CCDC7-203ENST00000362006 LCE2DQ5TA82 110 aaPredicted RBP7.87□□□□□ -1.15
CCDC7-203ENST00000362006 LCE2BO14633 110 aa7.86□□□□□ -1.15
CCDC7-203ENST00000362006 K7ERS5 55 aa7.84□□□□□ -1.15
CCDC7-203ENST00000362006 KRTAP12-1P59990 96 aa7.84□□□□□ -1.15
CCDC7-203ENST00000362006 SPINT4Q6UDR6 99 aa7.84□□□□□ -1.16
CCDC7-203ENST00000362006 PLAC4Q8WY50 150 aa7.84□□□□□ -1.16
CCDC7-203ENST00000362006 KRTAP12-2P59991 146 aa7.79□□□□□ -1.16
CCDC7-203ENST00000362006 MT1BP07438 61 aa7.79□□□□□ -1.16
CCDC7-203ENST00000362006 CAMK2N1Q7Z7J9 78 aa7.69□□□□□ -1.18
CCDC7-203ENST00000362006 USH2AO75445 5202 aa7.63□□□□□ -1.19
CCDC7-203ENST00000362006 KRTAP9-2Q9BYQ4 174 aa7.6□□□□□ -1.19
CCDC7-203ENST00000362006 PRO2289Q9P1D8 64 aa7.54□□□□□ -1.2
CCDC7-203ENST00000362006 PRAC1Q96KF2 57 aa7.51□□□□□ -1.21
CCDC7-203ENST00000362006 MT1XP80297 61 aa7.49□□□□□ -1.21
CCDC7-203ENST00000362006 KRTAP19-6Q3LI70 58 aa7.48□□□□□ -1.21
CCDC7-203ENST00000362006 KRTAP10-5P60370 271 aa7.48□□□□□ -1.21
CCDC7-203ENST00000362006 ROMO1P60602 79 aa7.43□□□□□ -1.22
CCDC7-203ENST00000362006 C10orf95Q9H7T3 257 aa7.43□□□□□ -1.22
CCDC7-203ENST00000362006 SSPOA2VEC9 5147 aa7.4□□□□□ -1.22
CCDC7-203ENST00000362006 FSIP2Q5CZC0 6907 aa7.36□□□□□ -1.23
CCDC7-203ENST00000362006 CRCT1Q9UGL9 99 aa7.33□□□□□ -1.24
CCDC7-203ENST00000362006 TNP1P09430 55 aa7.3□□□□□ -1.24
CCDC7-203ENST00000362006 KRTAP25-1Q3LHN0 102 aa7.28□□□□□ -1.24
CCDC7-203ENST00000362006 KRTAP10-7P60409 375 aaPredicted RBP7.16□□□□□ -1.26
CCDC7-203ENST00000362006 FCGBPQ9Y6R7 5405 aaPredicted RBP7.14□□□□□ -1.27
CCDC7-203ENST00000362006 KRTAP10-12P60413 245 aa7.14□□□□□ -1.27
CCDC7-203ENST00000362006 KRTAP9-6A0A140TA67 174 aa7.09□□□□□ -1.27
CCDC7-203ENST00000362006 KRTAP23-1A1A580 65 aa7.06□□□□□ -1.28
CCDC7-203ENST00000362006 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
CCDC7-203ENST00000362006 LCE3AQ5TA76 89 aa6.95□□□□□ -1.3
CCDC7-203ENST00000362006 H3BS24 57 aa6.95□□□□□ -1.3
CCDC7-203ENST00000362006 KRTAP4-8A0A0G2JLE6 195 aa6.91□□□□□ -1.3
CCDC7-203ENST00000362006 KRTAP4-8Q9BYQ9 185 aa6.91□□□□□ -1.3
CCDC7-203ENST00000362006 KRTAP8-1Q8IUC2 63 aa6.85□□□□□ -1.31
CCDC7-203ENST00000362006 MACF1Q9UPN3 7388 aaKnown RBP6.82□□□□□ -1.32
CCDC7-203ENST00000362006 KMT2DO14686 5537 aa6.8□□□□□ -1.32
CCDC7-203ENST00000362006 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.77□□□□□ -1.33
CCDC7-203ENST00000362006 KRTAP19-5Q3LI72 72 aa6.73□□□□□ -1.33
CCDC7-203ENST00000362006 KRTAP12-3P60328 96 aa6.72□□□□□ -1.33
CCDC7-203ENST00000362006 KRTAP19-7Q3SYF9 63 aa6.68□□□□□ -1.34
CCDC7-203ENST00000362006 KRTAP5-9P26371 169 aa6.62□□□□□ -1.35
CCDC7-203ENST00000362006 KRTAP6-3Q3LI67 103 aa6.61□□□□□ -1.35
CCDC7-203ENST00000362006 SPRR2FQ96RM1 72 aa6.6□□□□□ -1.35
CCDC7-203ENST00000362006 SYNE2Q8WXH0 6885 aaKnown RBP6.6□□□□□ -1.35
CCDC7-203ENST00000362006 MT1EP04732 61 aa6.59□□□□□ -1.35
CCDC7-203ENST00000362006 KRTAP15-1Q3LI76 137 aa6.55□□□□□ -1.36
CCDC7-203ENST00000362006 KRTAP9-7A8MTY7 169 aa6.46□□□□□ -1.37
CCDC7-203ENST00000362006 KRTAP19-4Q3LI73 84 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms