RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 M0QZ58 72 aa5.76□□□□□ -1.49
CNOT4-203ENST00000361528 PLECQ15149 4684 aaKnown RBP5.72□□□□□ -1.49
CNOT4-203ENST00000361528 STARD9Q9P2P6 4700 aa5.71□□□□□ -1.5
CNOT4-203ENST00000361528 DNAH2Q9P225 4427 aa5.71□□□□□ -1.5
CNOT4-203ENST00000361528 DNAH11Q96DT5 4516 aa5.69□□□□□ -1.5
CNOT4-203ENST00000361528 PP632Q6XCG6 107 aa5.67□□□□□ -1.5
CNOT4-203ENST00000361528 DMBT1Q9UGM3 2413 aaPredicted RBP5.67□□□□□ -1.5
CNOT4-203ENST00000361528 PRO2289Q9P1D8 64 aa5.66□□□□□ -1.5
CNOT4-203ENST00000361528 KRTAP10-2P60368 255 aa5.58□□□□□ -1.52
CNOT4-203ENST00000361528 KRTAP10-8P60410 259 aa5.55□□□□□ -1.52
CNOT4-203ENST00000361528 KRTAP10-1P60331 282 aa5.54□□□□□ -1.52
CNOT4-203ENST00000361528 LRP1BQ9NZR2 4599 aa5.54□□□□□ -1.52
CNOT4-203ENST00000361528 DNAH5Q8TE73 4624 aa5.53□□□□□ -1.52
CNOT4-203ENST00000361528 HYDINQ4G0P3 5121 aa5.53□□□□□ -1.52
CNOT4-203ENST00000361528 SACSQ9NZJ4 4579 aa5.53□□□□□ -1.52
CNOT4-203ENST00000361528 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
CNOT4-203ENST00000361528 MYCBP2O75592 4640 aa5.49□□□□□ -1.53
CNOT4-203ENST00000361528 VPS13BQ7Z7G8 4022 aa5.48□□□□□ -1.53
CNOT4-203ENST00000361528 INE1O15225 51 aa5.47□□□□□ -1.53
CNOT4-203ENST00000361528 KMT2CQ8NEZ4 4911 aaKnown RBP5.46□□□□□ -1.54
CNOT4-203ENST00000361528 PKHD1L1Q86WI1 4243 aa5.43□□□□□ -1.54
CNOT4-203ENST00000361528 J3QL48 77 aa5.39□□□□□ -1.55
CNOT4-203ENST00000361528 R4GN34 69 aa5.38□□□□□ -1.55
CNOT4-203ENST00000361528 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
CNOT4-203ENST00000361528 FAT2Q9NYQ8 4349 aa5.34□□□□□ -1.55
CNOT4-203ENST00000361528 APOBP04114 4563 aaKnown RBP5.34□□□□□ -1.55
CNOT4-203ENST00000361528 RYR2Q92736 4967 aa5.34□□□□□ -1.55
CNOT4-203ENST00000361528 PKD1P98161 4303 aa5.33□□□□□ -1.56
CNOT4-203ENST00000361528 PKHD1P08F94 4074 aa5.33□□□□□ -1.56
CNOT4-203ENST00000361528 RYR3Q15413 4870 aa5.32□□□□□ -1.56
CNOT4-203ENST00000361528 LRP1Q07954 4544 aaKnown RBP5.31□□□□□ -1.56
CNOT4-203ENST00000361528 KRTAP4-8Q9BYQ9 185 aa5.26□□□□□ -1.57
CNOT4-203ENST00000361528 A0A1B0GVY2 172 aa5.25□□□□□ -1.57
CNOT4-203ENST00000361528 LCE2BO14633 110 aa5.24□□□□□ -1.57
CNOT4-203ENST00000361528 TNXBP22105 4242 aa5.21□□□□□ -1.57
CNOT4-203ENST00000361528 SMR3BP02814 79 aaPredicted RBP5.19□□□□□ -1.58
CNOT4-203ENST00000361528 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.17□□□□□ -1.58
CNOT4-203ENST00000361528 KRTAP10-4P60372 401 aaPredicted RBP5.17□□□□□ -1.58
CNOT4-203ENST00000361528 DYNC1H1Q14204 4646 aaKnown RBP5.17□□□□□ -1.58
CNOT4-203ENST00000361528 Q5VSD8 79 aa5.16□□□□□ -1.58
CNOT4-203ENST00000361528 FAT3Q8TDW7 4589 aa5.16□□□□□ -1.58
CNOT4-203ENST00000361528 EPPK1P58107 5090 aaKnown RBP5.15□□□□□ -1.59
CNOT4-203ENST00000361528 KRTAP9-6A0A140TA67 174 aa5.13□□□□□ -1.59
CNOT4-203ENST00000361528 TNP1P09430 55 aa5.13□□□□□ -1.59
CNOT4-203ENST00000361528 KRTAP9-2Q9BYQ4 174 aa5.13□□□□□ -1.59
CNOT4-203ENST00000361528 HSPG2P98160 4391 aa5.1□□□□□ -1.59
CNOT4-203ENST00000361528 FAT1Q14517 4588 aa5.1□□□□□ -1.59
CNOT4-203ENST00000361528 KIAA1109Q2LD37 5005 aa5.09□□□□□ -1.59
CNOT4-203ENST00000361528 KRTAP17-1Q9BYP8 105 aa5.07□□□□□ -1.6
CNOT4-203ENST00000361528 LORP23490 312 aaPredicted RBP5.06□□□□□ -1.6
CNOT4-203ENST00000361528 RYR1P21817 5038 aa5.01□□□□□ -1.61
CNOT4-203ENST00000361528 KRTAP4-8A0A0G2JLE6 195 aa4.97□□□□□ -1.61
CNOT4-203ENST00000361528 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
CNOT4-203ENST00000361528 LCE2AQ5TA79 106 aaPredicted RBP4.97□□□□□ -1.61
CNOT4-203ENST00000361528 KRTAP4-5Q9BYR2 181 aa4.95□□□□□ -1.62
CNOT4-203ENST00000361528 LCE2CQ5TA81 110 aa4.91□□□□□ -1.62
CNOT4-203ENST00000361528 KRTAP9-9Q9BYP9 154 aa4.88□□□□□ -1.63
CNOT4-203ENST00000361528 KRTAP9-4Q9BYQ2 154 aa4.88□□□□□ -1.63
CNOT4-203ENST00000361528 BIRC6Q9NR09 4857 aa4.86□□□□□ -1.63
CNOT4-203ENST00000361528 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
CNOT4-203ENST00000361528 ABCA13Q86UQ4 5058 aa4.84□□□□□ -1.63
CNOT4-203ENST00000361528 MT1HL1P0DM35 61 aa4.8□□□□□ -1.64
CNOT4-203ENST00000361528 LPAP08519 4548 aa4.79□□□□□ -1.64
CNOT4-203ENST00000361528 HERC2O95714 4834 aa4.79□□□□□ -1.64
CNOT4-203ENST00000361528 PCLOQ9Y6V0 5065 aa4.77□□□□□ -1.65
CNOT4-203ENST00000361528 FLGP20930 4061 aaPredicted RBP4.76□□□□□ -1.65
CNOT4-203ENST00000361528 KRTAP4-12Q9BQ66 201 aa4.73□□□□□ -1.65
CNOT4-203ENST00000361528 LCE3AQ5TA76 89 aa4.69□□□□□ -1.66
CNOT4-203ENST00000361528 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
CNOT4-203ENST00000361528 KRTAP8-1Q8IUC2 63 aa4.66□□□□□ -1.66
CNOT4-203ENST00000361528 KRTAP10-10P60014 251 aa4.66□□□□□ -1.66
CNOT4-203ENST00000361528 LRP2P98164 4655 aa4.65□□□□□ -1.67
CNOT4-203ENST00000361528 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
CNOT4-203ENST00000361528 LCE1DQ5T752 114 aa4.64□□□□□ -1.67
CNOT4-203ENST00000361528 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
CNOT4-203ENST00000361528 HERC1Q15751 4861 aa4.63□□□□□ -1.67
CNOT4-203ENST00000361528 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
CNOT4-203ENST00000361528 MUC17Q685J3 4493 aa4.57□□□□□ -1.68
CNOT4-203ENST00000361528 KRTAP10-12P60413 245 aa4.57□□□□□ -1.68
CNOT4-203ENST00000361528 KRTAP19-2Q3LHN2 52 aa4.56□□□□□ -1.68
CNOT4-203ENST00000361528 KRTAP12-3P60328 96 aa4.48□□□□□ -1.69
CNOT4-203ENST00000361528 MUC2Q02817 5179 aa4.47□□□□□ -1.69
CNOT4-203ENST00000361528 SPRR2GQ9BYE4 73 aa4.46□□□□□ -1.69
CNOT4-203ENST00000361528 KRTAP4-1Q9BYQ7 146 aa4.46□□□□□ -1.7
CNOT4-203ENST00000361528 HMCN2Q8NDA2 5059 aa4.46□□□□□ -1.7
CNOT4-203ENST00000361528 UBR4Q5T4S7 5183 aa4.41□□□□□ -1.7
CNOT4-203ENST00000361528 KRTAP10-5P60370 271 aa4.4□□□□□ -1.7
CNOT4-203ENST00000361528 KRTAP19-1Q8IUB9 90 aa4.4□□□□□ -1.7
CNOT4-203ENST00000361528 RNF213Q63HN8 5207 aa4.38□□□□□ -1.71
CNOT4-203ENST00000361528 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
CNOT4-203ENST00000361528 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
CNOT4-203ENST00000361528 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
CNOT4-203ENST00000361528 KRTAP4-11Q9BYQ6 195 aa4.3□□□□□ -1.72
CNOT4-203ENST00000361528 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
CNOT4-203ENST00000361528 FAT4Q6V0I7 4981 aa4.23□□□□□ -1.73
CNOT4-203ENST00000361528 KRTAP19-8Q3LI54 63 aa4.15□□□□□ -1.74
CNOT4-203ENST00000361528 MT1XP80297 61 aa4.14□□□□□ -1.75
CNOT4-203ENST00000361528 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
CNOT4-203ENST00000361528 M0R2T5 61 aa4.11□□□□□ -1.75
CNOT4-203ENST00000361528 KRTAP9-6A8MVA2 160 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms