RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 ACYP2P14621 99 aa10.92□□□□□ -0.66
HOXA4-201ENST00000360046 KRTAP19-2Q3LHN2 52 aa10.92□□□□□ -0.66
HOXA4-201ENST00000360046 H1FX-AS1Q4G0G2 97 aa10.92□□□□□ -0.66
HOXA4-201ENST00000360046 BRK1Q8WUW1 75 aa10.88□□□□□ -0.67
HOXA4-201ENST00000360046 PSPHP1O15172 72 aa10.86□□□□□ -0.67
HOXA4-201ENST00000360046 LCE2CQ5TA81 110 aa10.82□□□□□ -0.68
HOXA4-201ENST00000360046 LINC01558Q9Y6Z2 57 aa10.81□□□□□ -0.68
HOXA4-201ENST00000360046 FAT4Q6V0I7 4981 aa10.8□□□□□ -0.68
HOXA4-201ENST00000360046 S4R3F8 94 aa10.8□□□□□ -0.68
HOXA4-201ENST00000360046 Q5VV11 94 aa10.79□□□□□ -0.68
HOXA4-201ENST00000360046 FLGP20930 4061 aaPredicted RBP10.79□□□□□ -0.68
HOXA4-201ENST00000360046 CHKB-CPT1BH3BT56 60 aa10.78□□□□□ -0.68
HOXA4-201ENST00000360046 PRR15LQ9BU68 103 aa10.77□□□□□ -0.69
HOXA4-201ENST00000360046 LCA10Q71F78 164 aa10.75□□□□□ -0.69
HOXA4-201ENST00000360046 MT1HP80294 61 aa10.66□□□□□ -0.7
HOXA4-201ENST00000360046 KRTAP3-3Q9BYR6 98 aa10.64□□□□□ -0.71
HOXA4-201ENST00000360046 M0R2T5 61 aa10.62□□□□□ -0.71
HOXA4-201ENST00000360046 SPTSSBQ8NFR3 76 aa10.61□□□□□ -0.71
HOXA4-201ENST00000360046 LCE2AQ5TA79 106 aaPredicted RBP10.6□□□□□ -0.71
HOXA4-201ENST00000360046 A6NED7 52 aa10.58□□□□□ -0.72
HOXA4-201ENST00000360046 CSAG1Q6PB30 78 aa10.58□□□□□ -0.72
HOXA4-201ENST00000360046 CDC42SE1Q9NRR8 79 aa10.51□□□□□ -0.73
HOXA4-201ENST00000360046 A0A1B0GU69 56 aa10.44□□□□□ -0.74
HOXA4-201ENST00000360046 A8MU10 97 aa10.33□□□□□ -0.76
HOXA4-201ENST00000360046 PMAIP1Q13794 54 aa10.33□□□□□ -0.76
HOXA4-201ENST00000360046 KRTAP10-6P60371 365 aaPredicted RBP10.33□□□□□ -0.76
HOXA4-201ENST00000360046 SEC61GP60059 68 aa10.28□□□□□ -0.76
HOXA4-201ENST00000360046 ADM2Q7Z4H4 148 aa10.28□□□□□ -0.76
HOXA4-201ENST00000360046 H0YAA0 97 aa10.27□□□□□ -0.77
HOXA4-201ENST00000360046 UQCR11O14957 56 aa10.27□□□□□ -0.77
HOXA4-201ENST00000360046 LORP23490 312 aaPredicted RBP10.25□□□□□ -0.77
HOXA4-201ENST00000360046 SPATA8Q6RVD6 105 aa10.24□□□□□ -0.77
HOXA4-201ENST00000360046 KRTAP3-2Q9BYR7 98 aa10.2□□□□□ -0.78
HOXA4-201ENST00000360046 KRTAP9-8Q9BYQ0 159 aa10.19□□□□□ -0.78
HOXA4-201ENST00000360046 A6NN06 94 aa10.17□□□□□ -0.78
HOXA4-201ENST00000360046 P0C880 135 aa10.17□□□□□ -0.78
HOXA4-201ENST00000360046 MIR22HGQ0VDD5 57 aa10.17□□□□□ -0.78
HOXA4-201ENST00000360046 KRTAP9-2Q9BYQ4 174 aa10.17□□□□□ -0.78
HOXA4-201ENST00000360046 MT2AP02795 61 aa10.15□□□□□ -0.78
HOXA4-201ENST00000360046 KRTAP10-10P60014 251 aa10.1□□□□□ -0.79
HOXA4-201ENST00000360046 KTN1-AS1Q86SY8 53 aa10.1□□□□□ -0.79
HOXA4-201ENST00000360046 MT1FP04733 61 aa10.08□□□□□ -0.8
HOXA4-201ENST00000360046 A0A1B0GU33 70 aa10□□□□□ -0.81
HOXA4-201ENST00000360046 LCE2DQ5TA82 110 aaPredicted RBP9.95□□□□□ -0.82
HOXA4-201ENST00000360046 R4GN34 69 aa9.95□□□□□ -0.82
HOXA4-201ENST00000360046 CRIPTQ9P021 101 aa9.94□□□□□ -0.82
HOXA4-201ENST00000360046 M0QZ58 72 aa9.93□□□□□ -0.82
HOXA4-201ENST00000360046 KRTAP13-4Q3LI77 160 aa9.86□□□□□ -0.83
HOXA4-201ENST00000360046 KRTAP9-3Q9BYQ3 159 aa9.84□□□□□ -0.83
HOXA4-201ENST00000360046 FSIP2Q5CZC0 6907 aa9.79□□□□□ -0.84
HOXA4-201ENST00000360046 KRTAP19-1Q8IUB9 90 aa9.79□□□□□ -0.84
HOXA4-201ENST00000360046 SPRR2GQ9BYE4 73 aa9.79□□□□□ -0.84
HOXA4-201ENST00000360046 LINC01554Q52M75 96 aa9.78□□□□□ -0.84
HOXA4-201ENST00000360046 KRTAP9-6A0A140TA67 174 aa9.75□□□□□ -0.85
HOXA4-201ENST00000360046 A0A0D9SG42 100 aa9.71□□□□□ -0.85
HOXA4-201ENST00000360046 K7ERS5 55 aa9.68□□□□□ -0.86
HOXA4-201ENST00000360046 LCE2BO14633 110 aa9.64□□□□□ -0.87
HOXA4-201ENST00000360046 CRCT1Q9UGL9 99 aa9.63□□□□□ -0.87
HOXA4-201ENST00000360046 KRTAP19-8Q3LI54 63 aa9.56□□□□□ -0.88
HOXA4-201ENST00000360046 PRAC1Q96KF2 57 aa9.51□□□□□ -0.89
HOXA4-201ENST00000360046 SPINT4Q6UDR6 99 aa9.51□□□□□ -0.89
HOXA4-201ENST00000360046 USH2AO75445 5202 aa9.5□□□□□ -0.89
HOXA4-201ENST00000360046 MT1BP07438 61 aa9.47□□□□□ -0.89
HOXA4-201ENST00000360046 KRTAP12-1P59990 96 aa9.47□□□□□ -0.89
HOXA4-201ENST00000360046 PLAC4Q8WY50 150 aa9.46□□□□□ -0.89
HOXA4-201ENST00000360046 KRTAP12-2P59991 146 aa9.45□□□□□ -0.9
HOXA4-201ENST00000360046 SSPOA2VEC9 5147 aa9.35□□□□□ -0.91
HOXA4-201ENST00000360046 ROMO1P60602 79 aa9.31□□□□□ -0.92
HOXA4-201ENST00000360046 CAMK2N1Q7Z7J9 78 aa9.31□□□□□ -0.92
HOXA4-201ENST00000360046 KRTAP25-1Q3LHN0 102 aa9.25□□□□□ -0.93
HOXA4-201ENST00000360046 KRTAP19-6Q3LI70 58 aa9.12□□□□□ -0.95
HOXA4-201ENST00000360046 MT1XP80297 61 aa9.11□□□□□ -0.95
HOXA4-201ENST00000360046 FCGBPQ9Y6R7 5405 aaPredicted RBP9.1□□□□□ -0.95
HOXA4-201ENST00000360046 KRTAP10-5P60370 271 aa9.08□□□□□ -0.96
HOXA4-201ENST00000360046 PRO2289Q9P1D8 64 aa9.08□□□□□ -0.96
HOXA4-201ENST00000360046 C10orf95Q9H7T3 257 aa8.98□□□□□ -0.97
HOXA4-201ENST00000360046 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.97□□□□□ -0.97
HOXA4-201ENST00000360046 KRTAP9-7A8MTY7 169 aa8.8□□□□□ -1
HOXA4-201ENST00000360046 TNP1P09430 55 aa8.77□□□□□ -1
HOXA4-201ENST00000360046 MACF1Q9UPN3 7388 aaKnown RBP8.75□□□□□ -1.01
HOXA4-201ENST00000360046 KRTAP10-7P60409 375 aaPredicted RBP8.74□□□□□ -1.01
HOXA4-201ENST00000360046 SYNE2Q8WXH0 6885 aaKnown RBP8.68□□□□□ -1.02
HOXA4-201ENST00000360046 KRTAP10-12P60413 245 aa8.63□□□□□ -1.03
HOXA4-201ENST00000360046 KMT2DO14686 5537 aa8.52□□□□□ -1.04
HOXA4-201ENST00000360046 PP632Q6XCG6 107 aa8.49□□□□□ -1.05
HOXA4-201ENST00000360046 KRTAP4-8A0A0G2JLE6 195 aa8.47□□□□□ -1.05
HOXA4-201ENST00000360046 KRTAP4-8Q9BYQ9 185 aa8.47□□□□□ -1.05
HOXA4-201ENST00000360046 LCE3AQ5TA76 89 aa8.46□□□□□ -1.06
HOXA4-201ENST00000360046 KRTAP6-3Q3LI67 103 aa8.41□□□□□ -1.06
HOXA4-201ENST00000360046 KRTAP23-1A1A580 65 aa8.36□□□□□ -1.07
HOXA4-201ENST00000360046 KRTAP8-1Q8IUC2 63 aa8.35□□□□□ -1.07
HOXA4-201ENST00000360046 KRTAP15-1Q3LI76 137 aa8.34□□□□□ -1.07
HOXA4-201ENST00000360046 KRTAP19-5Q3LI72 72 aa8.19□□□□□ -1.1
HOXA4-201ENST00000360046 MUC12Q9UKN1 5478 aa8.18□□□□□ -1.1
HOXA4-201ENST00000360046 H3BS24 57 aa8.15□□□□□ -1.1
HOXA4-201ENST00000360046 SPRR2FQ96RM1 72 aa8.13□□□□□ -1.11
HOXA4-201ENST00000360046 KRTAP12-3P60328 96 aa8.12□□□□□ -1.11
HOXA4-201ENST00000360046 KRTAP19-7Q3SYF9 63 aa8.12□□□□□ -1.11
HOXA4-201ENST00000360046 KRTAP5-9P26371 169 aa8.11□□□□□ -1.11
HOXA4-201ENST00000360046 NEBP20929 6669 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms