RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 LOC100996750A0A140TA64 210 aa7.75□□□□□ -1.17
CSNK1E-201ENST00000359867 KRTAP4-6Q9BYQ5 205 aa7.75□□□□□ -1.17
CSNK1E-201ENST00000359867 KRTAP16-1A8MUX0 517 aa7.74□□□□□ -1.17
CSNK1E-201ENST00000359867 J3QL48 77 aa7.73□□□□□ -1.17
CSNK1E-201ENST00000359867 SPATA8Q6RVD6 105 aa7.73□□□□□ -1.17
CSNK1E-201ENST00000359867 ACYP2P14621 99 aa7.68□□□□□ -1.18
CSNK1E-201ENST00000359867 MIR22HGQ0VDD5 57 aa7.67□□□□□ -1.18
CSNK1E-201ENST00000359867 A0A1B0GU69 56 aa7.66□□□□□ -1.18
CSNK1E-201ENST00000359867 DMAC1Q96GE9 116 aa7.63□□□□□ -1.19
CSNK1E-201ENST00000359867 ROMO1P60602 79 aa7.6□□□□□ -1.19
CSNK1E-201ENST00000359867 IGKV2D-30A0A075B6S6 120 aa7.59□□□□□ -1.19
CSNK1E-201ENST00000359867 IGKV2-30P06310 120 aa7.59□□□□□ -1.19
CSNK1E-201ENST00000359867 UQCR11O14957 56 aa7.59□□□□□ -1.19
CSNK1E-201ENST00000359867 HERC1Q15751 4861 aa7.58□□□□□ -1.2
CSNK1E-201ENST00000359867 C20orf166-AS1Q96NR2 134 aa7.54□□□□□ -1.2
CSNK1E-201ENST00000359867 A8MUU9 505 aa7.53□□□□□ -1.2
CSNK1E-201ENST00000359867 C9orf92A6NGG3 77 aa7.52□□□□□ -1.21
CSNK1E-201ENST00000359867 P0C880 135 aa7.49□□□□□ -1.21
CSNK1E-201ENST00000359867 KRTAP25-1Q3LHN0 102 aa7.48□□□□□ -1.21
CSNK1E-201ENST00000359867 LPAP08519 4548 aa7.48□□□□□ -1.21
CSNK1E-201ENST00000359867 HMCN2Q8NDA2 5059 aa7.39□□□□□ -1.23
CSNK1E-201ENST00000359867 CRIPTQ9P021 101 aa7.39□□□□□ -1.23
CSNK1E-201ENST00000359867 TPRXLQ17RH7 258 aa7.38□□□□□ -1.23
CSNK1E-201ENST00000359867 LRP2P98164 4655 aa7.37□□□□□ -1.23
CSNK1E-201ENST00000359867 XP32Q5T750 250 aa7.34□□□□□ -1.23
CSNK1E-201ENST00000359867 RPL37P61927 97 aaKnown RBP7.31□□□□□ -1.24
CSNK1E-201ENST00000359867 A0A0A0MQY5 61 aa7.29□□□□□ -1.24
CSNK1E-201ENST00000359867 H0YAA0 97 aa7.29□□□□□ -1.24
CSNK1E-201ENST00000359867 KRTAP3-1Q9BYR8 98 aa7.19□□□□□ -1.26
CSNK1E-201ENST00000359867 UBR4Q5T4S7 5183 aa7.17□□□□□ -1.26
CSNK1E-201ENST00000359867 NDUFAF8A1L188 74 aa7.17□□□□□ -1.26
CSNK1E-201ENST00000359867 COX6B2Q6YFQ2 88 aa7.17□□□□□ -1.26
CSNK1E-201ENST00000359867 SEC61BP60468 96 aaKnown RBP7.12□□□□□ -1.27
CSNK1E-201ENST00000359867 SPINT4Q6UDR6 99 aa7.12□□□□□ -1.27
CSNK1E-201ENST00000359867 MUC2Q02817 5179 aa7.11□□□□□ -1.27
CSNK1E-201ENST00000359867 A0A1B0GU33 70 aa7.11□□□□□ -1.27
CSNK1E-201ENST00000359867 MUC17Q685J3 4493 aa7.1□□□□□ -1.27
CSNK1E-201ENST00000359867 H1FX-AS1Q4G0G2 97 aa7.07□□□□□ -1.28
CSNK1E-201ENST00000359867 KRTAP4-1Q9BYQ7 146 aa7.07□□□□□ -1.28
CSNK1E-201ENST00000359867 RNF213Q63HN8 5207 aa7.05□□□□□ -1.28
CSNK1E-201ENST00000359867 KRTAP15-1Q3LI76 137 aa7.03□□□□□ -1.28
CSNK1E-201ENST00000359867 LCE2BO14633 110 aa7.01□□□□□ -1.29
CSNK1E-201ENST00000359867 C10orf95Q9H7T3 257 aa6.96□□□□□ -1.3
CSNK1E-201ENST00000359867 S4R3F8 94 aa6.93□□□□□ -1.3
CSNK1E-201ENST00000359867 K7ERS5 55 aa6.92□□□□□ -1.3
CSNK1E-201ENST00000359867 A0A0D9SG42 100 aa6.88□□□□□ -1.31
CSNK1E-201ENST00000359867 KRTAP13-4Q3LI77 160 aa6.86□□□□□ -1.31
CSNK1E-201ENST00000359867 KRTAP10-6P60371 365 aaPredicted RBP6.84□□□□□ -1.31
CSNK1E-201ENST00000359867 KRTAP19-2Q3LHN2 52 aa6.81□□□□□ -1.32
CSNK1E-201ENST00000359867 KRTAP4-8Q9BYQ9 185 aa6.81□□□□□ -1.32
CSNK1E-201ENST00000359867 FAT4Q6V0I7 4981 aa6.8□□□□□ -1.32
CSNK1E-201ENST00000359867 LCE2AQ5TA79 106 aaPredicted RBP6.76□□□□□ -1.33
CSNK1E-201ENST00000359867 LUZP6Q538Z0 58 aa6.75□□□□□ -1.33
CSNK1E-201ENST00000359867 LCE2CQ5TA81 110 aa6.74□□□□□ -1.33
CSNK1E-201ENST00000359867 FLGP20930 4061 aaPredicted RBP6.67□□□□□ -1.34
CSNK1E-201ENST00000359867 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.66□□□□□ -1.34
CSNK1E-201ENST00000359867 KRTAP9-2Q9BYQ4 174 aa6.64□□□□□ -1.35
CSNK1E-201ENST00000359867 KRTAP12-2P59991 146 aa6.63□□□□□ -1.35
CSNK1E-201ENST00000359867 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
CSNK1E-201ENST00000359867 MT1HP80294 61 aa6.62□□□□□ -1.35
CSNK1E-201ENST00000359867 M0R2T5 61 aa6.56□□□□□ -1.36
CSNK1E-201ENST00000359867 KRTAP12-1P59990 96 aa6.54□□□□□ -1.36
CSNK1E-201ENST00000359867 M0QZ58 72 aa6.52□□□□□ -1.37
CSNK1E-201ENST00000359867 LCE3BQ5TA77 95 aa6.44□□□□□ -1.38
CSNK1E-201ENST00000359867 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
CSNK1E-201ENST00000359867 R4GN34 69 aa6.4□□□□□ -1.39
CSNK1E-201ENST00000359867 LORP23490 312 aaPredicted RBP6.37□□□□□ -1.39
CSNK1E-201ENST00000359867 PLAC4Q8WY50 150 aa6.35□□□□□ -1.39
CSNK1E-201ENST00000359867 KRTAP9-8Q9BYQ0 159 aa6.34□□□□□ -1.39
CSNK1E-201ENST00000359867 MT2AP02795 61 aa6.31□□□□□ -1.4
CSNK1E-201ENST00000359867 KRTAP9-9Q9BYP9 154 aa6.3□□□□□ -1.4
CSNK1E-201ENST00000359867 KRTAP9-4Q9BYQ2 154 aa6.3□□□□□ -1.4
CSNK1E-201ENST00000359867 MT1FP04733 61 aa6.28□□□□□ -1.4
CSNK1E-201ENST00000359867 KRTAP10-10P60014 251 aa6.26□□□□□ -1.41
CSNK1E-201ENST00000359867 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
CSNK1E-201ENST00000359867 KRTAP4-12Q9BQ66 201 aa6.19□□□□□ -1.42
CSNK1E-201ENST00000359867 KRTAP9-3Q9BYQ3 159 aa6.11□□□□□ -1.43
CSNK1E-201ENST00000359867 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
CSNK1E-201ENST00000359867 SPRR2GQ9BYE4 73 aa6.08□□□□□ -1.44
CSNK1E-201ENST00000359867 LCE1DQ5T752 114 aa6.03□□□□□ -1.44
CSNK1E-201ENST00000359867 CAMK2N1Q7Z7J9 78 aa6.03□□□□□ -1.44
CSNK1E-201ENST00000359867 USH2AO75445 5202 aa5.96□□□□□ -1.46
CSNK1E-201ENST00000359867 FSIP2Q5CZC0 6907 aa5.96□□□□□ -1.46
CSNK1E-201ENST00000359867 KRTAP4-2Q9BYR5 136 aa5.96□□□□□ -1.46
CSNK1E-201ENST00000359867 KRTAP4-9Q9BYQ8 210 aa5.95□□□□□ -1.46
CSNK1E-201ENST00000359867 KRTAP19-8Q3LI54 63 aa5.9□□□□□ -1.47
CSNK1E-201ENST00000359867 MT1BP07438 61 aa5.88□□□□□ -1.47
CSNK1E-201ENST00000359867 KRTAP5-3Q6L8H2 238 aa5.87□□□□□ -1.47
CSNK1E-201ENST00000359867 PP632Q6XCG6 107 aa5.84□□□□□ -1.47
CSNK1E-201ENST00000359867 PRO2289Q9P1D8 64 aa5.82□□□□□ -1.48
CSNK1E-201ENST00000359867 SSPOA2VEC9 5147 aa5.79□□□□□ -1.48
CSNK1E-201ENST00000359867 TNP1P09430 55 aa5.78□□□□□ -1.48
CSNK1E-201ENST00000359867 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
CSNK1E-201ENST00000359867 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.5
CSNK1E-201ENST00000359867 MT1XP80297 61 aa5.64□□□□□ -1.51
CSNK1E-201ENST00000359867 KRTAP19-6Q3LI70 58 aa5.64□□□□□ -1.51
CSNK1E-201ENST00000359867 CRCT1Q9UGL9 99 aa5.64□□□□□ -1.51
CSNK1E-201ENST00000359867 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
CSNK1E-201ENST00000359867 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
CSNK1E-201ENST00000359867 FCGBPQ9Y6R7 5405 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms