RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 ORMDL1Q9P0S3 153 aa0.68□□□□□ -2.3
SMARCAD1-202ENST00000359052 A0A1W2PNN7 141 aa0.68□□□□□ -2.3
SMARCAD1-202ENST00000359052 Q5VSD8 79 aa0.68□□□□□ -2.3
SMARCAD1-202ENST00000359052 MINOS1Q5TGZ0 78 aa0.67□□□□□ -2.3
SMARCAD1-202ENST00000359052 BRK1Q8WUW1 75 aa0.67□□□□□ -2.3
SMARCAD1-202ENST00000359052 PTPRZ1P23471 2315 aaPredicted RBP0.67□□□□□ -2.3
SMARCAD1-202ENST00000359052 PCNX1Q96RV3 2341 aa0.67□□□□□ -2.3
SMARCAD1-202ENST00000359052 SPTBN2O15020 2390 aa0.67□□□□□ -2.3
SMARCAD1-202ENST00000359052 SPINK9Q5DT21 86 aa0.67□□□□□ -2.3
SMARCAD1-202ENST00000359052 C10orf95Q9H7T3 257 aa0.67□□□□□ -2.3
SMARCAD1-202ENST00000359052 LELP1Q5T871 98 aa0.67□□□□□ -2.3
SMARCAD1-202ENST00000359052 DEFB104AQ8WTQ1 72 aa0.67□□□□□ -2.3
SMARCAD1-202ENST00000359052 MACF1Q9UPN3 7388 aaKnown RBP0.67□□□□□ -2.3
SMARCAD1-202ENST00000359052 ANGP03950 147 aaKnown RBP0.67□□□□□ -2.3
SMARCAD1-202ENST00000359052 RPL37AP61513 92 aaKnown RBP0.67□□□□□ -2.3
SMARCAD1-202ENST00000359052 S100A7L2Q5SY68 101 aa0.67□□□□□ -2.3
SMARCAD1-202ENST00000359052 LINC00208Q96KT6 92 aa0.67□□□□□ -2.3
SMARCAD1-202ENST00000359052 PCBD1P61457 104 aa0.66□□□□□ -2.3
SMARCAD1-202ENST00000359052 NDUFA4O00483 81 aa0.66□□□□□ -2.3
SMARCAD1-202ENST00000359052 UBE2DNLQ8IWF7 75 aa0.66□□□□□ -2.3
SMARCAD1-202ENST00000359052 C6orf48Q9UBA6 75 aa0.66□□□□□ -2.3
SMARCAD1-202ENST00000359052 PLCE1Q9P212 2302 aa0.66□□□□□ -2.3
SMARCAD1-202ENST00000359052 GOLGA4Q13439 2230 aaKnown RBP0.66□□□□□ -2.3
SMARCAD1-202ENST00000359052 NUPR2A6NF83 97 aa0.65□□□□□ -2.3
SMARCAD1-202ENST00000359052 NDUFB1O75438 58 aa0.65□□□□□ -2.3
SMARCAD1-202ENST00000359052 LINC00158P58513 81 aa0.65□□□□□ -2.3
SMARCAD1-202ENST00000359052 IGFL1Q6UW32 110 aa0.65□□□□□ -2.3
SMARCAD1-202ENST00000359052 AHCTF1Q8WYP5 2266 aa0.65□□□□□ -2.3
SMARCAD1-202ENST00000359052 NBASA2RRP1 2371 aa0.65□□□□□ -2.3
SMARCAD1-202ENST00000359052 H3BSH0 61 aa0.65□□□□□ -2.31
SMARCAD1-202ENST00000359052 UBE2L6O14933 153 aa0.65□□□□□ -2.31
SMARCAD1-202ENST00000359052 ACANP16112 2415 aa0.65□□□□□ -2.31
SMARCAD1-202ENST00000359052 KRTAP19-6Q3LI70 58 aa0.64□□□□□ -2.31
SMARCAD1-202ENST00000359052 UNQ6190/PRO20217Q6UXQ8 127 aa0.64□□□□□ -2.31
SMARCAD1-202ENST00000359052 C2CD3Q4AC94 2353 aa0.64□□□□□ -2.31
SMARCAD1-202ENST00000359052 STATHP02808 62 aa0.64□□□□□ -2.31
SMARCAD1-202ENST00000359052 WNK2Q9Y3S1 2297 aa0.64□□□□□ -2.31
SMARCAD1-202ENST00000359052 TRGV4A0A0C4DH28 118 aa0.64□□□□□ -2.31
SMARCAD1-202ENST00000359052 H0Y9P7 68 aa0.64□□□□□ -2.31
SMARCAD1-202ENST00000359052 INE1O15225 51 aa0.64□□□□□ -2.31
SMARCAD1-202ENST00000359052 SPTA1P02549 2419 aa0.64□□□□□ -2.31
SMARCAD1-202ENST00000359052 JMJD1CQ15652 2540 aa0.63□□□□□ -2.31
SMARCAD1-202ENST00000359052 ICE1Q9Y2F5 2266 aa0.63□□□□□ -2.31
SMARCAD1-202ENST00000359052 H3BNG1 76 aa0.63□□□□□ -2.31
SMARCAD1-202ENST00000359052 KRTAP8-1Q8IUC2 63 aa0.63□□□□□ -2.31
SMARCAD1-202ENST00000359052 H3BVH4 76 aa0.63□□□□□ -2.31
SMARCAD1-202ENST00000359052 RBM3P98179 157 aaKnown RBP0.63□□□□□ -2.31
SMARCAD1-202ENST00000359052 NAV2Q8IVL1 2488 aa0.63□□□□□ -2.31
SMARCAD1-202ENST00000359052 DEFB1P60022 68 aa0.63□□□□□ -2.31
SMARCAD1-202ENST00000359052 LEAP2Q969E1 77 aa0.63□□□□□ -2.31
SMARCAD1-202ENST00000359052 FLG2Q5D862 2391 aaPredicted RBP0.63□□□□□ -2.31
SMARCAD1-202ENST00000359052 MINOS1-NBL1R4GNA1 71 aa0.62□□□□□ -2.31
SMARCAD1-202ENST00000359052 CCDC168Q8NDH2 2452 aa0.62□□□□□ -2.31
SMARCAD1-202ENST00000359052 CNOT1A5YKK6 2376 aaKnown RBP0.62□□□□□ -2.31
SMARCAD1-202ENST00000359052 DEFB110Q30KQ9 67 aa0.62□□□□□ -2.31
SMARCAD1-202ENST00000359052 KRTAP19-8Q3LI54 63 aa0.62□□□□□ -2.31
SMARCAD1-202ENST00000359052 TP53AIP1Q9HCN2 124 aa0.62□□□□□ -2.31
SMARCAD1-202ENST00000359052 SONP18583 2426 aaKnown RBP0.62□□□□□ -2.31
SMARCAD1-202ENST00000359052 SPINK1P00995 79 aa0.62□□□□□ -2.31
SMARCAD1-202ENST00000359052 MIR22HGQ0VDD5 57 aa0.62□□□□□ -2.31
SMARCAD1-202ENST00000359052 DEFB131AP59861 70 aa0.61□□□□□ -2.31
SMARCAD1-202ENST00000359052 URB1O60287 2271 aaKnown RBP0.61□□□□□ -2.31
SMARCAD1-202ENST00000359052 MSMBP08118 114 aa0.61□□□□□ -2.31
SMARCAD1-202ENST00000359052 AKAP6Q13023 2319 aa0.61□□□□□ -2.31
SMARCAD1-202ENST00000359052 RETNLBQ9BQ08 111 aa0.61□□□□□ -2.31
SMARCAD1-202ENST00000359052 WNK1Q9H4A3 2382 aa0.61□□□□□ -2.31
SMARCAD1-202ENST00000359052 APLNQ9ULZ1 77 aa0.6□□□□□ -2.31
SMARCAD1-202ENST00000359052 ABCA1O95477 2261 aa0.6□□□□□ -2.31
SMARCAD1-202ENST00000359052 RPS29P62273 56 aaKnown RBP0.6□□□□□ -2.31
SMARCAD1-202ENST00000359052 ERHP84090 104 aaKnown RBP0.6□□□□□ -2.31
SMARCAD1-202ENST00000359052 MT1HP80294 61 aa0.59□□□□□ -2.31
SMARCAD1-202ENST00000359052 PLAC4Q8WY50 150 aa0.59□□□□□ -2.31
SMARCAD1-202ENST00000359052 SPTBN1Q01082 2364 aaKnown RBP0.59□□□□□ -2.31
SMARCAD1-202ENST00000359052 UBL5Q9BZL1 73 aa0.59□□□□□ -2.31
SMARCAD1-202ENST00000359052 MT1BP07438 61 aa0.59□□□□□ -2.32
SMARCAD1-202ENST00000359052 CCL19Q99731 98 aa0.59□□□□□ -2.32
SMARCAD1-202ENST00000359052 LY6EQ16553 131 aa0.59□□□□□ -2.32
SMARCAD1-202ENST00000359052 UQCR11O14957 56 aa0.58□□□□□ -2.32
SMARCAD1-202ENST00000359052 C4orf3Q8WVX3 66 aa0.58□□□□□ -2.32
SMARCAD1-202ENST00000359052 H1FX-AS1Q4G0G2 97 aa0.58□□□□□ -2.32
SMARCAD1-202ENST00000359052 SPTAN1Q13813 2472 aaKnown RBP0.57□□□□□ -2.32
SMARCAD1-202ENST00000359052 USMG5Q96IX5 58 aa0.57□□□□□ -2.32
SMARCAD1-202ENST00000359052 TPRP12270 2363 aaKnown RBP0.57□□□□□ -2.32
SMARCAD1-202ENST00000359052 DNAL4O96015 105 aa0.57□□□□□ -2.32
SMARCAD1-202ENST00000359052 SORL1Q92673 2214 aa0.57□□□□□ -2.32
SMARCAD1-202ENST00000359052 H3BUX3 64 aa0.56□□□□□ -2.32
SMARCAD1-202ENST00000359052 SPINT4Q6UDR6 99 aa0.56□□□□□ -2.32
SMARCAD1-202ENST00000359052 PRR15LQ9BU68 103 aa0.56□□□□□ -2.32
SMARCAD1-202ENST00000359052 DMBT1Q9UGM3 2413 aaPredicted RBP0.56□□□□□ -2.32
SMARCAD1-202ENST00000359052 CASC2Q6XLA1 102 aa0.56□□□□□ -2.32
SMARCAD1-202ENST00000359052 CHKB-CPT1BH3BT56 60 aa0.56□□□□□ -2.32
SMARCAD1-202ENST00000359052 SPRR2GQ9BYE4 73 aa0.56□□□□□ -2.32
SMARCAD1-202ENST00000359052 MTORP42345 2549 aa0.55□□□□□ -2.32
SMARCAD1-202ENST00000359052 TRGV1A0A0A0MS02 117 aa0.55□□□□□ -2.32
SMARCAD1-202ENST00000359052 ROS1P08922 2347 aa0.55□□□□□ -2.32
SMARCAD1-202ENST00000359052 A0A096LPF7 62 aa0.55□□□□□ -2.32
SMARCAD1-202ENST00000359052 SMR3BP02814 79 aaPredicted RBP0.55□□□□□ -2.32
SMARCAD1-202ENST00000359052 MT1AP04731 61 aa0.55□□□□□ -2.32
SMARCAD1-202ENST00000359052 FSIP2Q5CZC0 6907 aa0.55□□□□□ -2.32
SMARCAD1-202ENST00000359052 WFDC10AQ9H1F0 79 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms