RNA–Protein interactions for RNA: ENST00000358923.10

PDE4D-204, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-204ENST00000358923 KRTAP16-1A8MUX0 517 aa9.89□□□□□ -0.83
PDE4D-204ENST00000358923 A8MUU9 505 aa9.81□□□□□ -0.84
PDE4D-204ENST00000358923 IGKV2-30P06310 120 aa9.79□□□□□ -0.84
PDE4D-204ENST00000358923 KRTAP10-8P60410 259 aa9.78□□□□□ -0.84
PDE4D-204ENST00000358923 P0C880 135 aa9.78□□□□□ -0.84
PDE4D-204ENST00000358923 LPAP08519 4548 aa9.76□□□□□ -0.85
PDE4D-204ENST00000358923 IGKV2D-30A0A075B6S6 120 aa9.75□□□□□ -0.85
PDE4D-204ENST00000358923 HERC2O95714 4834 aa9.75□□□□□ -0.85
PDE4D-204ENST00000358923 MT1HL1P0DM35 61 aa9.71□□□□□ -0.85
PDE4D-204ENST00000358923 RPS29P62273 56 aaKnown RBP9.71□□□□□ -0.86
PDE4D-204ENST00000358923 LRP2P98164 4655 aa9.68□□□□□ -0.86
PDE4D-204ENST00000358923 H0YAA0 97 aa9.68□□□□□ -0.86
PDE4D-204ENST00000358923 CRIPTQ9P021 101 aa9.67□□□□□ -0.86
PDE4D-204ENST00000358923 BIRC6Q9NR09 4857 aa9.6□□□□□ -0.87
PDE4D-204ENST00000358923 PCLOQ9Y6V0 5065 aa9.55□□□□□ -0.88
PDE4D-204ENST00000358923 SPINT4Q6UDR6 99 aa9.52□□□□□ -0.88
PDE4D-204ENST00000358923 A0A1B0GU33 70 aa9.52□□□□□ -0.89
PDE4D-204ENST00000358923 C20orf166-AS1Q96NR2 134 aa9.52□□□□□ -0.89
PDE4D-204ENST00000358923 HERC1Q15751 4861 aa9.5□□□□□ -0.89
PDE4D-204ENST00000358923 K7ERS5 55 aa9.5□□□□□ -0.89
PDE4D-204ENST00000358923 NDUFAF8A1L188 74 aa9.45□□□□□ -0.9
PDE4D-204ENST00000358923 A0A0A0MQY5 61 aa9.45□□□□□ -0.9
PDE4D-204ENST00000358923 XP32Q5T750 250 aa9.44□□□□□ -0.9
PDE4D-204ENST00000358923 H1FX-AS1Q4G0G2 97 aa9.43□□□□□ -0.9
PDE4D-204ENST00000358923 MUC2Q02817 5179 aa9.42□□□□□ -0.9
PDE4D-204ENST00000358923 J3QL48 77 aa9.33□□□□□ -0.92
PDE4D-204ENST00000358923 KRTAP3-1Q9BYR8 98 aa9.32□□□□□ -0.92
PDE4D-204ENST00000358923 RPL37P61927 97 aaKnown RBP9.3□□□□□ -0.92
PDE4D-204ENST00000358923 KRTAP15-1Q3LI76 137 aa9.26□□□□□ -0.93
PDE4D-204ENST00000358923 TPRXLQ17RH7 258 aa9.25□□□□□ -0.93
PDE4D-204ENST00000358923 COX6B2Q6YFQ2 88 aa9.2□□□□□ -0.94
PDE4D-204ENST00000358923 C10orf95Q9H7T3 257 aa9.15□□□□□ -0.95
PDE4D-204ENST00000358923 HMCN2Q8NDA2 5059 aa9.08□□□□□ -0.96
PDE4D-204ENST00000358923 RNF213Q63HN8 5207 aa9.06□□□□□ -0.96
PDE4D-204ENST00000358923 MUC17Q685J3 4493 aa9.03□□□□□ -0.96
PDE4D-204ENST00000358923 A0A0D9SG42 100 aa9.02□□□□□ -0.97
PDE4D-204ENST00000358923 KRTAP4-1Q9BYQ7 146 aa9.02□□□□□ -0.97
PDE4D-204ENST00000358923 UBR4Q5T4S7 5183 aa9□□□□□ -0.97
PDE4D-204ENST00000358923 LUZP6Q538Z0 58 aa8.95□□□□□ -0.98
PDE4D-204ENST00000358923 FAT4Q6V0I7 4981 aa8.94□□□□□ -0.98
PDE4D-204ENST00000358923 KRTAP3-3Q9BYR6 98 aa8.92□□□□□ -0.98
PDE4D-204ENST00000358923 KRTAP13-4Q3LI77 160 aa8.89□□□□□ -0.99
PDE4D-204ENST00000358923 S4R3F8 94 aa8.84□□□□□ -0.99
PDE4D-204ENST00000358923 KRTAP10-6P60371 365 aaPredicted RBP8.82□□□□□ -1
PDE4D-204ENST00000358923 SEC61BP60468 96 aaKnown RBP8.82□□□□□ -1
PDE4D-204ENST00000358923 KRTAP12-2P59991 146 aa8.7□□□□□ -1.02
PDE4D-204ENST00000358923 KRTAP3-2Q9BYR7 98 aa8.67□□□□□ -1.02
PDE4D-204ENST00000358923 KRTAP19-2Q3LHN2 52 aa8.62□□□□□ -1.03
PDE4D-204ENST00000358923 FLGP20930 4061 aaPredicted RBP8.58□□□□□ -1.04
PDE4D-204ENST00000358923 KRTAP12-1P59990 96 aa8.55□□□□□ -1.04
PDE4D-204ENST00000358923 PLAC4Q8WY50 150 aa8.5□□□□□ -1.05
PDE4D-204ENST00000358923 LORP23490 312 aaPredicted RBP8.45□□□□□ -1.06
PDE4D-204ENST00000358923 LCE2CQ5TA81 110 aa8.37□□□□□ -1.07
PDE4D-204ENST00000358923 M0QZ58 72 aa8.27□□□□□ -1.09
PDE4D-204ENST00000358923 M0R2T5 61 aa8.24□□□□□ -1.09
PDE4D-204ENST00000358923 R4GN34 69 aa8.22□□□□□ -1.09
PDE4D-204ENST00000358923 MT1HP80294 61 aa8.18□□□□□ -1.1
PDE4D-204ENST00000358923 PP632Q6XCG6 107 aa7.96□□□□□ -1.14
PDE4D-204ENST00000358923 MT1FP04733 61 aa7.94□□□□□ -1.14
PDE4D-204ENST00000358923 CAMK2N1Q7Z7J9 78 aa7.92□□□□□ -1.14
PDE4D-204ENST00000358923 KRTAP10-10P60014 251 aa7.92□□□□□ -1.14
PDE4D-204ENST00000358923 MT2AP02795 61 aa7.91□□□□□ -1.14
PDE4D-204ENST00000358923 KRTAP9-8Q9BYQ0 159 aa7.9□□□□□ -1.14
PDE4D-204ENST00000358923 USH2AO75445 5202 aa7.9□□□□□ -1.14
PDE4D-204ENST00000358923 KRTAP19-1Q8IUB9 90 aa7.83□□□□□ -1.16
PDE4D-204ENST00000358923 PRO2289Q9P1D8 64 aa7.78□□□□□ -1.16
PDE4D-204ENST00000358923 SPRR2GQ9BYE4 73 aa7.69□□□□□ -1.18
PDE4D-204ENST00000358923 SPRR5A0A1B0GTR4 108 aa7.68□□□□□ -1.18
PDE4D-204ENST00000358923 FSIP2Q5CZC0 6907 aa7.67□□□□□ -1.18
PDE4D-204ENST00000358923 LCE2AQ5TA79 106 aaPredicted RBP7.6□□□□□ -1.19
PDE4D-204ENST00000358923 KRTAP9-3Q9BYQ3 159 aa7.57□□□□□ -1.2
PDE4D-204ENST00000358923 MT1BP07438 61 aa7.5□□□□□ -1.21
PDE4D-204ENST00000358923 INE1O15225 51 aa7.49□□□□□ -1.21
PDE4D-204ENST00000358923 LCE2BO14633 110 aa7.46□□□□□ -1.21
PDE4D-204ENST00000358923 TNP1P09430 55 aa7.45□□□□□ -1.22
PDE4D-204ENST00000358923 KMT2DO14686 5537 aa7.45□□□□□ -1.22
PDE4D-204ENST00000358923 KRTAP23-1A1A580 65 aa7.41□□□□□ -1.22
PDE4D-204ENST00000358923 KRTAP19-8Q3LI54 63 aa7.41□□□□□ -1.22
PDE4D-204ENST00000358923 MT1XP80297 61 aa7.32□□□□□ -1.24
PDE4D-204ENST00000358923 KRTAP10-5P60370 271 aa7.31□□□□□ -1.24
PDE4D-204ENST00000358923 SSPOA2VEC9 5147 aa7.28□□□□□ -1.24
PDE4D-204ENST00000358923 KRTAP10-7P60409 375 aaPredicted RBP7.17□□□□□ -1.26
PDE4D-204ENST00000358923 LCE3AQ5TA76 89 aa7.14□□□□□ -1.27
PDE4D-204ENST00000358923 KRTAP4-8A0A0G2JLE6 195 aa6.96□□□□□ -1.29
PDE4D-204ENST00000358923 KRTAP4-8Q9BYQ9 185 aa6.96□□□□□ -1.29
PDE4D-204ENST00000358923 KRTAP10-12P60413 245 aa6.96□□□□□ -1.3
PDE4D-204ENST00000358923 FCGBPQ9Y6R7 5405 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-204ENST00000358923 KRTAP8-1Q8IUC2 63 aa6.76□□□□□ -1.33
PDE4D-204ENST00000358923 KRTAP12-3P60328 96 aa6.74□□□□□ -1.33
PDE4D-204ENST00000358923 KRTAP19-5Q3LI72 72 aa6.73□□□□□ -1.33
PDE4D-204ENST00000358923 MUC12Q9UKN1 5478 aa6.72□□□□□ -1.33
PDE4D-204ENST00000358923 KRTAP19-6Q3LI70 58 aa6.67□□□□□ -1.34
PDE4D-204ENST00000358923 MACF1Q9UPN3 7388 aaKnown RBP6.64□□□□□ -1.35
PDE4D-204ENST00000358923 LCE2DQ5TA82 110 aaPredicted RBP6.6□□□□□ -1.35
PDE4D-204ENST00000358923 SYNE2Q8WXH0 6885 aaKnown RBP6.59□□□□□ -1.35
PDE4D-204ENST00000358923 KRTAP9-2Q9BYQ4 174 aa6.54□□□□□ -1.36
PDE4D-204ENST00000358923 KRTAP19-7Q3SYF9 63 aa6.53□□□□□ -1.36
PDE4D-204ENST00000358923 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
PDE4D-204ENST00000358923 DSTQ03001 7570 aaKnown RBP6.45□□□□□ -1.38
PDE4D-204ENST00000358923 MDN1Q9NU22 5596 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms