RNA–Protein interactions for RNA: ENST00000356876.7

TNFRSF25-204, Transcript of TNF receptor superfamily member 25, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-204ENST00000356876 LCA10Q71F78 164 aa12.74□□□□□ -0.37
TNFRSF25-204ENST00000356876 SPTSSBQ8NFR3 76 aa12.7□□□□□ -0.38
TNFRSF25-204ENST00000356876 SMIM26A0A096LP01 95 aa12.7□□□□□ -0.38
TNFRSF25-204ENST00000356876 KRTAP3-3Q9BYR6 98 aa12.69□□□□□ -0.38
TNFRSF25-204ENST00000356876 LCE2CQ5TA81 110 aa12.64□□□□□ -0.39
TNFRSF25-204ENST00000356876 FLGP20930 4061 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF25-204ENST00000356876 CSAG1Q6PB30 78 aa12.54□□□□□ -0.4
TNFRSF25-204ENST00000356876 Q1T7F1 81 aa12.5□□□□□ -0.41
TNFRSF25-204ENST00000356876 V9GYY9 64 aa12.48□□□□□ -0.41
TNFRSF25-204ENST00000356876 FAT4Q6V0I7 4981 aa12.47□□□□□ -0.41
TNFRSF25-204ENST00000356876 LINC01558Q9Y6Z2 57 aa12.47□□□□□ -0.41
TNFRSF25-204ENST00000356876 MT1HP80294 61 aa12.4□□□□□ -0.42
TNFRSF25-204ENST00000356876 A0A1B0GU69 56 aa12.32□□□□□ -0.44
TNFRSF25-204ENST00000356876 SEC61GP60059 68 aa12.32□□□□□ -0.44
TNFRSF25-204ENST00000356876 PRR15LQ9BU68 103 aa12.29□□□□□ -0.44
TNFRSF25-204ENST00000356876 M0R2T5 61 aa12.28□□□□□ -0.44
TNFRSF25-204ENST00000356876 PSPHP1O15172 72 aa12.26□□□□□ -0.45
TNFRSF25-204ENST00000356876 H0YAA0 97 aa12.25□□□□□ -0.45
TNFRSF25-204ENST00000356876 ADM2Q7Z4H4 148 aa12.19□□□□□ -0.46
TNFRSF25-204ENST00000356876 KRTAP3-2Q9BYR7 98 aa12.19□□□□□ -0.46
TNFRSF25-204ENST00000356876 KRTAP10-6P60371 365 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF25-204ENST00000356876 Q5VV11 94 aa12.16□□□□□ -0.46
TNFRSF25-204ENST00000356876 P0C880 135 aa12.09□□□□□ -0.47
TNFRSF25-204ENST00000356876 LCE2AQ5TA79 106 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF25-204ENST00000356876 A0A1B0GU33 70 aa12.01□□□□□ -0.49
TNFRSF25-204ENST00000356876 UQCR11O14957 56 aa11.93□□□□□ -0.5
TNFRSF25-204ENST00000356876 KRTAP9-8Q9BYQ0 159 aa11.93□□□□□ -0.5
TNFRSF25-204ENST00000356876 LORP23490 312 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF25-204ENST00000356876 A6NED7 52 aa11.89□□□□□ -0.51
TNFRSF25-204ENST00000356876 MT2AP02795 61 aa11.87□□□□□ -0.51
TNFRSF25-204ENST00000356876 M0QZ58 72 aa11.81□□□□□ -0.52
TNFRSF25-204ENST00000356876 MT1FP04733 61 aa11.79□□□□□ -0.52
TNFRSF25-204ENST00000356876 SPATA8Q6RVD6 105 aa11.79□□□□□ -0.52
TNFRSF25-204ENST00000356876 CRIPTQ9P021 101 aa11.79□□□□□ -0.52
TNFRSF25-204ENST00000356876 KRTAP13-4Q3LI77 160 aa11.78□□□□□ -0.52
TNFRSF25-204ENST00000356876 R4GN34 69 aa11.78□□□□□ -0.52
TNFRSF25-204ENST00000356876 KRTAP10-10P60014 251 aa11.78□□□□□ -0.52
TNFRSF25-204ENST00000356876 MIR22HGQ0VDD5 57 aa11.77□□□□□ -0.53
TNFRSF25-204ENST00000356876 CDC42SE1Q9NRR8 79 aa11.67□□□□□ -0.54
TNFRSF25-204ENST00000356876 BRK1Q8WUW1 75 aa11.63□□□□□ -0.55
TNFRSF25-204ENST00000356876 A8MU10 97 aa11.59□□□□□ -0.55
TNFRSF25-204ENST00000356876 SPRR2GQ9BYE4 73 aa11.57□□□□□ -0.56
TNFRSF25-204ENST00000356876 A0A0D9SG42 100 aa11.56□□□□□ -0.56
TNFRSF25-204ENST00000356876 LINC01554Q52M75 96 aa11.53□□□□□ -0.56
TNFRSF25-204ENST00000356876 KRTAP19-1Q8IUB9 90 aa11.53□□□□□ -0.56
TNFRSF25-204ENST00000356876 KRTAP9-3Q9BYQ3 159 aa11.51□□□□□ -0.57
TNFRSF25-204ENST00000356876 A6NN06 94 aa11.37□□□□□ -0.59
TNFRSF25-204ENST00000356876 KRTAP12-1P59990 96 aa11.35□□□□□ -0.59
TNFRSF25-204ENST00000356876 SPINT4Q6UDR6 99 aa11.31□□□□□ -0.6
TNFRSF25-204ENST00000356876 KRTAP12-2P59991 146 aa11.3□□□□□ -0.6
TNFRSF25-204ENST00000356876 KRTAP19-8Q3LI54 63 aa11.29□□□□□ -0.6
TNFRSF25-204ENST00000356876 PRO0628Q9UI54 55 aa11.29□□□□□ -0.6
TNFRSF25-204ENST00000356876 K7ERS5 55 aa11.28□□□□□ -0.6
TNFRSF25-204ENST00000356876 LCE2BO14633 110 aa11.2□□□□□ -0.62
TNFRSF25-204ENST00000356876 PLAC4Q8WY50 150 aa11.16□□□□□ -0.62
TNFRSF25-204ENST00000356876 MT1BP07438 61 aa11.13□□□□□ -0.63
TNFRSF25-204ENST00000356876 LCE2DQ5TA82 110 aaPredicted RBP11.02□□□□□ -0.64
TNFRSF25-204ENST00000356876 CAMK2N1Q7Z7J9 78 aa11.02□□□□□ -0.65
TNFRSF25-204ENST00000356876 PMAIP1Q13794 54 aa11.01□□□□□ -0.65
TNFRSF25-204ENST00000356876 USH2AO75445 5202 aa10.93□□□□□ -0.66
TNFRSF25-204ENST00000356876 ROMO1P60602 79 aa10.78□□□□□ -0.68
TNFRSF25-204ENST00000356876 C10orf95Q9H7T3 257 aa10.74□□□□□ -0.69
TNFRSF25-204ENST00000356876 MT1XP80297 61 aa10.73□□□□□ -0.69
TNFRSF25-204ENST00000356876 KRTAP10-5P60370 271 aa10.72□□□□□ -0.69
TNFRSF25-204ENST00000356876 PRO2289Q9P1D8 64 aa10.67□□□□□ -0.7
TNFRSF25-204ENST00000356876 KRTAP9-2Q9BYQ4 174 aa10.64□□□□□ -0.71
TNFRSF25-204ENST00000356876 SSPOA2VEC9 5147 aa10.61□□□□□ -0.71
TNFRSF25-204ENST00000356876 KRTAP19-6Q3LI70 58 aa10.58□□□□□ -0.72
TNFRSF25-204ENST00000356876 FSIP2Q5CZC0 6907 aa10.5□□□□□ -0.73
TNFRSF25-204ENST00000356876 KTN1-AS1Q86SY8 53 aa10.47□□□□□ -0.73
TNFRSF25-204ENST00000356876 TNP1P09430 55 aa10.46□□□□□ -0.74
TNFRSF25-204ENST00000356876 KRTAP25-1Q3LHN0 102 aa10.46□□□□□ -0.74
TNFRSF25-204ENST00000356876 PRAC1Q96KF2 57 aa10.29□□□□□ -0.76
TNFRSF25-204ENST00000356876 KRTAP10-7P60409 375 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF25-204ENST00000356876 CRCT1Q9UGL9 99 aa10.25□□□□□ -0.77
TNFRSF25-204ENST00000356876 KRTAP10-12P60413 245 aa10.19□□□□□ -0.78
TNFRSF25-204ENST00000356876 FCGBPQ9Y6R7 5405 aaPredicted RBP10.17□□□□□ -0.78
TNFRSF25-204ENST00000356876 KRTAP23-1A1A580 65 aa10.12□□□□□ -0.79
TNFRSF25-204ENST00000356876 PP632Q6XCG6 107 aa10.07□□□□□ -0.8
TNFRSF25-204ENST00000356876 LCE3AQ5TA76 89 aa10.03□□□□□ -0.8
TNFRSF25-204ENST00000356876 SVIPQ8NHG7 77 aa10.02□□□□□ -0.81
TNFRSF25-204ENST00000356876 KRTAP4-8A0A0G2JLE6 195 aa9.92□□□□□ -0.82
TNFRSF25-204ENST00000356876 KRTAP4-8Q9BYQ9 185 aa9.92□□□□□ -0.82
TNFRSF25-204ENST00000356876 KRTAP9-6A0A140TA67 174 aa9.87□□□□□ -0.83
TNFRSF25-204ENST00000356876 KMT2DO14686 5537 aa9.86□□□□□ -0.83
TNFRSF25-204ENST00000356876 KRTAP8-1Q8IUC2 63 aa9.84□□□□□ -0.83
TNFRSF25-204ENST00000356876 KRTAP19-5Q3LI72 72 aa9.66□□□□□ -0.86
TNFRSF25-204ENST00000356876 KRTAP12-3P60328 96 aa9.65□□□□□ -0.86
TNFRSF25-204ENST00000356876 MACF1Q9UPN3 7388 aaKnown RBP9.62□□□□□ -0.87
TNFRSF25-204ENST00000356876 KRTAP19-7Q3SYF9 63 aa9.58□□□□□ -0.88
TNFRSF25-204ENST00000356876 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.49□□□□□ -0.89
TNFRSF25-204ENST00000356876 MT1EP04732 61 aa9.42□□□□□ -0.9
TNFRSF25-204ENST00000356876 KRTAP15-1Q3LI76 137 aa9.42□□□□□ -0.9
TNFRSF25-204ENST00000356876 SPRR2FQ96RM1 72 aa9.36□□□□□ -0.91
TNFRSF25-204ENST00000356876 SYNE2Q8WXH0 6885 aaKnown RBP9.34□□□□□ -0.91
TNFRSF25-204ENST00000356876 KRTAP5-9P26371 169 aa9.33□□□□□ -0.92
TNFRSF25-204ENST00000356876 KRTAP6-3Q3LI67 103 aa9.25□□□□□ -0.93
TNFRSF25-204ENST00000356876 MT1LQ93083 61 aa9.21□□□□□ -0.93
TNFRSF25-204ENST00000356876 MUC12Q9UKN1 5478 aa9.18□□□□□ -0.94
TNFRSF25-204ENST00000356876 KRTAP19-4Q3LI73 84 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms