RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 H1FX-AS1Q4G0G2 97 aa9.04□□□□□ -0.96
SMARCD3-202ENST00000356800 Q1T7F1 81 aa8.98□□□□□ -0.97
SMARCD3-202ENST00000356800 SPTSSBQ8NFR3 76 aa8.97□□□□□ -0.97
SMARCD3-202ENST00000356800 LCE2CQ5TA81 110 aa8.95□□□□□ -0.98
SMARCD3-202ENST00000356800 V9GYY9 64 aa8.95□□□□□ -0.98
SMARCD3-202ENST00000356800 S4R3F8 94 aa8.94□□□□□ -0.98
SMARCD3-202ENST00000356800 LCA10Q71F78 164 aa8.93□□□□□ -0.98
SMARCD3-202ENST00000356800 FLGP20930 4061 aaPredicted RBP8.92□□□□□ -0.98
SMARCD3-202ENST00000356800 KRTAP3-3Q9BYR6 98 aa8.91□□□□□ -0.98
SMARCD3-202ENST00000356800 LINC01558Q9Y6Z2 57 aa8.91□□□□□ -0.98
SMARCD3-202ENST00000356800 FAT4Q6V0I7 4981 aa8.86□□□□□ -0.99
SMARCD3-202ENST00000356800 PSPHP1O15172 72 aa8.78□□□□□ -1
SMARCD3-202ENST00000356800 PRR15LQ9BU68 103 aa8.78□□□□□ -1
SMARCD3-202ENST00000356800 CSAG1Q6PB30 78 aa8.77□□□□□ -1.01
SMARCD3-202ENST00000356800 MT1HP80294 61 aa8.75□□□□□ -1.01
SMARCD3-202ENST00000356800 A0A1B0GU69 56 aa8.75□□□□□ -1.01
SMARCD3-202ENST00000356800 Q5VV11 94 aa8.72□□□□□ -1.01
SMARCD3-202ENST00000356800 SEC61GP60059 68 aa8.72□□□□□ -1.01
SMARCD3-202ENST00000356800 H0YAA0 97 aa8.61□□□□□ -1.03
SMARCD3-202ENST00000356800 M0R2T5 61 aa8.6□□□□□ -1.03
SMARCD3-202ENST00000356800 KRTAP3-2Q9BYR7 98 aa8.59□□□□□ -1.03
SMARCD3-202ENST00000356800 KRTAP10-6P60371 365 aaPredicted RBP8.57□□□□□ -1.04
SMARCD3-202ENST00000356800 LCE2AQ5TA79 106 aaPredicted RBP8.54□□□□□ -1.04
SMARCD3-202ENST00000356800 ADM2Q7Z4H4 148 aa8.54□□□□□ -1.04
SMARCD3-202ENST00000356800 A6NED7 52 aa8.52□□□□□ -1.05
SMARCD3-202ENST00000356800 A0A1B0GU33 70 aa8.5□□□□□ -1.05
SMARCD3-202ENST00000356800 UQCR11O14957 56 aa8.49□□□□□ -1.05
SMARCD3-202ENST00000356800 P0C880 135 aa8.49□□□□□ -1.05
SMARCD3-202ENST00000356800 LCE2DQ5TA82 110 aaPredicted RBP8.46□□□□□ -1.05
SMARCD3-202ENST00000356800 KRTAP9-8Q9BYQ0 159 aa8.43□□□□□ -1.06
SMARCD3-202ENST00000356800 LORP23490 312 aaPredicted RBP8.41□□□□□ -1.06
SMARCD3-202ENST00000356800 BRK1Q8WUW1 75 aa8.4□□□□□ -1.07
SMARCD3-202ENST00000356800 MIR22HGQ0VDD5 57 aa8.39□□□□□ -1.07
SMARCD3-202ENST00000356800 SPATA8Q6RVD6 105 aa8.39□□□□□ -1.07
SMARCD3-202ENST00000356800 CDC42SE1Q9NRR8 79 aa8.39□□□□□ -1.07
SMARCD3-202ENST00000356800 MT2AP02795 61 aa8.38□□□□□ -1.07
SMARCD3-202ENST00000356800 MT1FP04733 61 aa8.34□□□□□ -1.08
SMARCD3-202ENST00000356800 M0QZ58 72 aa8.32□□□□□ -1.08
SMARCD3-202ENST00000356800 KRTAP13-4Q3LI77 160 aa8.32□□□□□ -1.08
SMARCD3-202ENST00000356800 A8MU10 97 aa8.3□□□□□ -1.08
SMARCD3-202ENST00000356800 KRTAP10-10P60014 251 aa8.27□□□□□ -1.08
SMARCD3-202ENST00000356800 R4GN34 69 aa8.25□□□□□ -1.09
SMARCD3-202ENST00000356800 PRO0628Q9UI54 55 aa8.24□□□□□ -1.09
SMARCD3-202ENST00000356800 CRIPTQ9P021 101 aa8.24□□□□□ -1.09
SMARCD3-202ENST00000356800 A0A0D9SG42 100 aa8.14□□□□□ -1.11
SMARCD3-202ENST00000356800 KRTAP19-1Q8IUB9 90 aa8.14□□□□□ -1.11
SMARCD3-202ENST00000356800 KRTAP9-3Q9BYQ3 159 aa8.13□□□□□ -1.11
SMARCD3-202ENST00000356800 SPRR2GQ9BYE4 73 aa8.11□□□□□ -1.11
SMARCD3-202ENST00000356800 LINC01554Q52M75 96 aa8.06□□□□□ -1.12
SMARCD3-202ENST00000356800 K7ERS5 55 aa8.02□□□□□ -1.13
SMARCD3-202ENST00000356800 KRTAP12-1P59990 96 aa8.01□□□□□ -1.13
SMARCD3-202ENST00000356800 A6NN06 94 aa8□□□□□ -1.13
SMARCD3-202ENST00000356800 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
SMARCD3-202ENST00000356800 PMAIP1Q13794 54 aa7.95□□□□□ -1.14
SMARCD3-202ENST00000356800 SPINT4Q6UDR6 99 aa7.95□□□□□ -1.14
SMARCD3-202ENST00000356800 LCE2BO14633 110 aa7.94□□□□□ -1.14
SMARCD3-202ENST00000356800 KRTAP19-8Q3LI54 63 aa7.93□□□□□ -1.14
SMARCD3-202ENST00000356800 MT1BP07438 61 aa7.86□□□□□ -1.15
SMARCD3-202ENST00000356800 USH2AO75445 5202 aa7.81□□□□□ -1.16
SMARCD3-202ENST00000356800 PLAC4Q8WY50 150 aa7.76□□□□□ -1.17
SMARCD3-202ENST00000356800 CAMK2N1Q7Z7J9 78 aa7.71□□□□□ -1.18
SMARCD3-202ENST00000356800 ROMO1P60602 79 aa7.69□□□□□ -1.18
SMARCD3-202ENST00000356800 KTN1-AS1Q86SY8 53 aa7.63□□□□□ -1.19
SMARCD3-202ENST00000356800 KRTAP9-2Q9BYQ4 174 aa7.58□□□□□ -1.2
SMARCD3-202ENST00000356800 C10orf95Q9H7T3 257 aa7.58□□□□□ -1.2
SMARCD3-202ENST00000356800 SSPOA2VEC9 5147 aa7.57□□□□□ -1.2
SMARCD3-202ENST00000356800 MT1XP80297 61 aa7.57□□□□□ -1.2
SMARCD3-202ENST00000356800 KRTAP10-5P60370 271 aa7.54□□□□□ -1.2
SMARCD3-202ENST00000356800 FSIP2Q5CZC0 6907 aa7.53□□□□□ -1.2
SMARCD3-202ENST00000356800 KRTAP19-6Q3LI70 58 aa7.46□□□□□ -1.22
SMARCD3-202ENST00000356800 PRAC1Q96KF2 57 aa7.42□□□□□ -1.22
SMARCD3-202ENST00000356800 PRO2289Q9P1D8 64 aa7.42□□□□□ -1.22
SMARCD3-202ENST00000356800 KRTAP25-1Q3LHN0 102 aa7.4□□□□□ -1.23
SMARCD3-202ENST00000356800 TNP1P09430 55 aa7.36□□□□□ -1.23
SMARCD3-202ENST00000356800 FCGBPQ9Y6R7 5405 aaPredicted RBP7.29□□□□□ -1.24
SMARCD3-202ENST00000356800 CRCT1Q9UGL9 99 aa7.28□□□□□ -1.24
SMARCD3-202ENST00000356800 KRTAP10-7P60409 375 aaPredicted RBP7.25□□□□□ -1.25
SMARCD3-202ENST00000356800 KRTAP23-1A1A580 65 aa7.18□□□□□ -1.26
SMARCD3-202ENST00000356800 KRTAP10-12P60413 245 aa7.16□□□□□ -1.26
SMARCD3-202ENST00000356800 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
SMARCD3-202ENST00000356800 H3BS24 57 aa7.07□□□□□ -1.28
SMARCD3-202ENST00000356800 KMT2DO14686 5537 aa7.06□□□□□ -1.28
SMARCD3-202ENST00000356800 KRTAP9-6A0A140TA67 174 aa7.03□□□□□ -1.28
SMARCD3-202ENST00000356800 LCE3AQ5TA76 89 aa7.03□□□□□ -1.28
SMARCD3-202ENST00000356800 KRTAP4-8A0A0G2JLE6 195 aa7.02□□□□□ -1.29
SMARCD3-202ENST00000356800 KRTAP4-8Q9BYQ9 185 aa7.02□□□□□ -1.29
SMARCD3-202ENST00000356800 KRTAP8-1Q8IUC2 63 aa6.93□□□□□ -1.3
SMARCD3-202ENST00000356800 MACF1Q9UPN3 7388 aaKnown RBP6.91□□□□□ -1.3
SMARCD3-202ENST00000356800 KRTAP19-5Q3LI72 72 aa6.79□□□□□ -1.32
SMARCD3-202ENST00000356800 KRTAP12-3P60328 96 aa6.77□□□□□ -1.33
SMARCD3-202ENST00000356800 KRTAP19-7Q3SYF9 63 aa6.76□□□□□ -1.33
SMARCD3-202ENST00000356800 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.75□□□□□ -1.33
SMARCD3-202ENST00000356800 SYNE2Q8WXH0 6885 aaKnown RBP6.71□□□□□ -1.34
SMARCD3-202ENST00000356800 MT1EP04732 61 aa6.64□□□□□ -1.35
SMARCD3-202ENST00000356800 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
SMARCD3-202ENST00000356800 SPRR2FQ96RM1 72 aa6.6□□□□□ -1.35
SMARCD3-202ENST00000356800 KRTAP5-9P26371 169 aa6.59□□□□□ -1.35
SMARCD3-202ENST00000356800 MUC12Q9UKN1 5478 aa6.58□□□□□ -1.36
SMARCD3-202ENST00000356800 KRTAP6-3Q3LI67 103 aa6.54□□□□□ -1.36
SMARCD3-202ENST00000356800 MT1LQ93083 61 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms