RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 HERC1Q15751 4861 aa9.62□□□□□ -0.87
NPAS3-202ENST00000356141 KRTAP10-8P60410 259 aa9.62□□□□□ -0.87
NPAS3-202ENST00000356141 RPS29P62273 56 aaKnown RBP9.59□□□□□ -0.87
NPAS3-202ENST00000356141 LPAP08519 4548 aa9.59□□□□□ -0.87
NPAS3-202ENST00000356141 ROMO1P60602 79 aa9.58□□□□□ -0.88
NPAS3-202ENST00000356141 MT1HL1P0DM35 61 aa9.53□□□□□ -0.88
NPAS3-202ENST00000356141 P0C880 135 aa9.5□□□□□ -0.89
NPAS3-202ENST00000356141 LRP2P98164 4655 aa9.5□□□□□ -0.89
NPAS3-202ENST00000356141 A8MUU9 505 aa9.44□□□□□ -0.9
NPAS3-202ENST00000356141 SEC61BP60468 96 aaKnown RBP9.43□□□□□ -0.9
NPAS3-202ENST00000356141 C20orf166-AS1Q96NR2 134 aa9.43□□□□□ -0.9
NPAS3-202ENST00000356141 A0A1B0GU69 56 aa9.41□□□□□ -0.9
NPAS3-202ENST00000356141 MIR22HGQ0VDD5 57 aa9.4□□□□□ -0.9
NPAS3-202ENST00000356141 SPATA8Q6RVD6 105 aa9.38□□□□□ -0.91
NPAS3-202ENST00000356141 ACYP2P14621 99 aa9.37□□□□□ -0.91
NPAS3-202ENST00000356141 XP32Q5T750 250 aa9.36□□□□□ -0.91
NPAS3-202ENST00000356141 DMAC1Q96GE9 116 aa9.36□□□□□ -0.91
NPAS3-202ENST00000356141 UQCR11O14957 56 aa9.31□□□□□ -0.92
NPAS3-202ENST00000356141 LUZP6Q538Z0 58 aa9.24□□□□□ -0.93
NPAS3-202ENST00000356141 KRTAP3-1Q9BYR8 98 aa9.24□□□□□ -0.93
NPAS3-202ENST00000356141 RPL37P61927 97 aaKnown RBP9.23□□□□□ -0.93
NPAS3-202ENST00000356141 NDUFAF8A1L188 74 aa9.22□□□□□ -0.93
NPAS3-202ENST00000356141 KRTAP25-1Q3LHN0 102 aa9.2□□□□□ -0.94
NPAS3-202ENST00000356141 MUC2Q02817 5179 aa9.19□□□□□ -0.94
NPAS3-202ENST00000356141 UBR4Q5T4S7 5183 aa9.15□□□□□ -0.94
NPAS3-202ENST00000356141 CRIPTQ9P021 101 aa9.1□□□□□ -0.95
NPAS3-202ENST00000356141 RNF213Q63HN8 5207 aa9.1□□□□□ -0.95
NPAS3-202ENST00000356141 COX6B2Q6YFQ2 88 aa9.05□□□□□ -0.96
NPAS3-202ENST00000356141 TPRXLQ17RH7 258 aa9.03□□□□□ -0.96
NPAS3-202ENST00000356141 HMCN2Q8NDA2 5059 aa8.96□□□□□ -0.97
NPAS3-202ENST00000356141 SPINT4Q6UDR6 99 aa8.9□□□□□ -0.99
NPAS3-202ENST00000356141 KRTAP4-1Q9BYQ7 146 aa8.88□□□□□ -0.99
NPAS3-202ENST00000356141 MUC17Q685J3 4493 aa8.85□□□□□ -0.99
NPAS3-202ENST00000356141 KRTAP3-3Q9BYR6 98 aa8.85□□□□□ -0.99
NPAS3-202ENST00000356141 S4R3F8 94 aa8.85□□□□□ -0.99
NPAS3-202ENST00000356141 H0YAA0 97 aa8.81□□□□□ -1
NPAS3-202ENST00000356141 K7ERS5 55 aa8.81□□□□□ -1
NPAS3-202ENST00000356141 H1FX-AS1Q4G0G2 97 aa8.75□□□□□ -1.01
NPAS3-202ENST00000356141 FAT4Q6V0I7 4981 aa8.74□□□□□ -1.01
NPAS3-202ENST00000356141 A0A1B0GU33 70 aa8.69□□□□□ -1.02
NPAS3-202ENST00000356141 A0A0D9SG42 100 aa8.64□□□□□ -1.03
NPAS3-202ENST00000356141 KRTAP15-1Q3LI76 137 aa8.63□□□□□ -1.03
NPAS3-202ENST00000356141 KRTAP10-6P60371 365 aaPredicted RBP8.61□□□□□ -1.03
NPAS3-202ENST00000356141 KRTAP13-4Q3LI77 160 aa8.58□□□□□ -1.04
NPAS3-202ENST00000356141 KRTAP3-2Q9BYR7 98 aa8.58□□□□□ -1.04
NPAS3-202ENST00000356141 C10orf95Q9H7T3 257 aa8.5□□□□□ -1.05
NPAS3-202ENST00000356141 KRTAP19-2Q3LHN2 52 aa8.42□□□□□ -1.06
NPAS3-202ENST00000356141 LORP23490 312 aaPredicted RBP8.39□□□□□ -1.07
NPAS3-202ENST00000356141 FLGP20930 4061 aaPredicted RBP8.36□□□□□ -1.07
NPAS3-202ENST00000356141 M0QZ58 72 aa8.3□□□□□ -1.08
NPAS3-202ENST00000356141 R4GN34 69 aa8.25□□□□□ -1.09
NPAS3-202ENST00000356141 KRTAP12-2P59991 146 aa8.25□□□□□ -1.09
NPAS3-202ENST00000356141 M0R2T5 61 aa8.23□□□□□ -1.09
NPAS3-202ENST00000356141 CAMK2N1Q7Z7J9 78 aa8.19□□□□□ -1.1
NPAS3-202ENST00000356141 LCE2CQ5TA81 110 aa8.18□□□□□ -1.1
NPAS3-202ENST00000356141 KRTAP12-1P59990 96 aa8.12□□□□□ -1.11
NPAS3-202ENST00000356141 FSIP2Q5CZC0 6907 aa8.05□□□□□ -1.12
NPAS3-202ENST00000356141 MT1HP80294 61 aa8.04□□□□□ -1.12
NPAS3-202ENST00000356141 KRTAP23-1A1A580 65 aa7.87□□□□□ -1.15
NPAS3-202ENST00000356141 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
NPAS3-202ENST00000356141 MT1FP04733 61 aa7.82□□□□□ -1.16
NPAS3-202ENST00000356141 PLAC4Q8WY50 150 aa7.81□□□□□ -1.16
NPAS3-202ENST00000356141 MT2AP02795 61 aa7.79□□□□□ -1.16
NPAS3-202ENST00000356141 KRTAP9-8Q9BYQ0 159 aa7.74□□□□□ -1.17
NPAS3-202ENST00000356141 USH2AO75445 5202 aa7.74□□□□□ -1.17
NPAS3-202ENST00000356141 KRTAP19-1Q8IUB9 90 aa7.71□□□□□ -1.18
NPAS3-202ENST00000356141 PRO2289Q9P1D8 64 aa7.65□□□□□ -1.18
NPAS3-202ENST00000356141 LCE2AQ5TA79 106 aaPredicted RBP7.59□□□□□ -1.19
NPAS3-202ENST00000356141 SPRR2GQ9BYE4 73 aa7.57□□□□□ -1.2
NPAS3-202ENST00000356141 KRTAP9-3Q9BYQ3 159 aa7.41□□□□□ -1.22
NPAS3-202ENST00000356141 MT1BP07438 61 aa7.37□□□□□ -1.23
NPAS3-202ENST00000356141 KMT2DO14686 5537 aa7.32□□□□□ -1.24
NPAS3-202ENST00000356141 LCE2BO14633 110 aa7.31□□□□□ -1.24
NPAS3-202ENST00000356141 TNP1P09430 55 aa7.31□□□□□ -1.24
NPAS3-202ENST00000356141 KRTAP19-8Q3LI54 63 aa7.28□□□□□ -1.24
NPAS3-202ENST00000356141 SSPOA2VEC9 5147 aa7.23□□□□□ -1.25
NPAS3-202ENST00000356141 MT1XP80297 61 aa7.22□□□□□ -1.25
NPAS3-202ENST00000356141 KRTAP10-5P60370 271 aa7.21□□□□□ -1.25
NPAS3-202ENST00000356141 KRTAP9-2Q9BYQ4 174 aa7.17□□□□□ -1.26
NPAS3-202ENST00000356141 LCE3AQ5TA76 89 aa7.13□□□□□ -1.27
NPAS3-202ENST00000356141 KRTAP10-7P60409 375 aaPredicted RBP7.1□□□□□ -1.27
NPAS3-202ENST00000356141 PP632Q6XCG6 107 aa7.09□□□□□ -1.27
NPAS3-202ENST00000356141 INE1O15225 51 aa6.95□□□□□ -1.3
NPAS3-202ENST00000356141 KRTAP10-12P60413 245 aa6.94□□□□□ -1.3
NPAS3-202ENST00000356141 FCGBPQ9Y6R7 5405 aaPredicted RBP6.92□□□□□ -1.3
NPAS3-202ENST00000356141 KRTAP4-8A0A0G2JLE6 195 aa6.89□□□□□ -1.31
NPAS3-202ENST00000356141 KRTAP4-8Q9BYQ9 185 aa6.89□□□□□ -1.31
NPAS3-202ENST00000356141 SYNE2Q8WXH0 6885 aaKnown RBP6.89□□□□□ -1.31
NPAS3-202ENST00000356141 SPRR5A0A1B0GTR4 108 aa6.89□□□□□ -1.31
NPAS3-202ENST00000356141 LCE2DQ5TA82 110 aaPredicted RBP6.83□□□□□ -1.32
NPAS3-202ENST00000356141 MACF1Q9UPN3 7388 aaKnown RBP6.83□□□□□ -1.32
NPAS3-202ENST00000356141 CRCT1Q9UGL9 99 aa6.77□□□□□ -1.33
NPAS3-202ENST00000356141 KRTAP12-3P60328 96 aa6.72□□□□□ -1.33
NPAS3-202ENST00000356141 KRTAP8-1Q8IUC2 63 aa6.7□□□□□ -1.34
NPAS3-202ENST00000356141 KRTAP19-5Q3LI72 72 aa6.69□□□□□ -1.34
NPAS3-202ENST00000356141 KRTAP9-6A0A140TA67 174 aa6.68□□□□□ -1.34
NPAS3-202ENST00000356141 MUC12Q9UKN1 5478 aa6.59□□□□□ -1.35
NPAS3-202ENST00000356141 KRTAP19-6Q3LI70 58 aa6.51□□□□□ -1.37
NPAS3-202ENST00000356141 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
NPAS3-202ENST00000356141 KRTAP19-7Q3SYF9 63 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 362.9 ms