RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 FAT4Q6V0I7 4981 aa12□□□□□ -0.49
CHKA-202ENST00000356135 Q1T7F1 81 aa11.94□□□□□ -0.5
CHKA-202ENST00000356135 H1FX-AS1Q4G0G2 97 aa11.92□□□□□ -0.5
CHKA-202ENST00000356135 V9GYY9 64 aa11.89□□□□□ -0.51
CHKA-202ENST00000356135 FLGP20930 4061 aaPredicted RBP11.83□□□□□ -0.52
CHKA-202ENST00000356135 MT1HP80294 61 aa11.79□□□□□ -0.52
CHKA-202ENST00000356135 SPTSSBQ8NFR3 76 aa11.79□□□□□ -0.52
CHKA-202ENST00000356135 LINC01558Q9Y6Z2 57 aa11.79□□□□□ -0.52
CHKA-202ENST00000356135 S4R3F8 94 aa11.74□□□□□ -0.53
CHKA-202ENST00000356135 LCA10Q71F78 164 aa11.73□□□□□ -0.53
CHKA-202ENST00000356135 PSPHP1O15172 72 aa11.68□□□□□ -0.54
CHKA-202ENST00000356135 KRTAP3-3Q9BYR6 98 aa11.68□□□□□ -0.54
CHKA-202ENST00000356135 PRR15LQ9BU68 103 aa11.67□□□□□ -0.54
CHKA-202ENST00000356135 M0R2T5 61 aa11.64□□□□□ -0.55
CHKA-202ENST00000356135 LCE2AQ5TA79 106 aaPredicted RBP11.62□□□□□ -0.55
CHKA-202ENST00000356135 Q5VV11 94 aa11.62□□□□□ -0.55
CHKA-202ENST00000356135 A0A1B0GU69 56 aa11.57□□□□□ -0.56
CHKA-202ENST00000356135 CSAG1Q6PB30 78 aa11.51□□□□□ -0.57
CHKA-202ENST00000356135 SEC61GP60059 68 aa11.47□□□□□ -0.57
CHKA-202ENST00000356135 KRTAP10-6P60371 365 aaPredicted RBP11.41□□□□□ -0.58
CHKA-202ENST00000356135 LORP23490 312 aaPredicted RBP11.36□□□□□ -0.59
CHKA-202ENST00000356135 A6NED7 52 aa11.32□□□□□ -0.6
CHKA-202ENST00000356135 KRTAP9-8Q9BYQ0 159 aa11.31□□□□□ -0.6
CHKA-202ENST00000356135 KRTAP3-2Q9BYR7 98 aa11.28□□□□□ -0.6
CHKA-202ENST00000356135 H0YAA0 97 aa11.26□□□□□ -0.61
CHKA-202ENST00000356135 BRK1Q8WUW1 75 aa11.25□□□□□ -0.61
CHKA-202ENST00000356135 UQCR11O14957 56 aa11.24□□□□□ -0.61
CHKA-202ENST00000356135 MT2AP02795 61 aa11.23□□□□□ -0.61
CHKA-202ENST00000356135 A0A1B0GU33 70 aa11.2□□□□□ -0.62
CHKA-202ENST00000356135 ADM2Q7Z4H4 148 aa11.2□□□□□ -0.62
CHKA-202ENST00000356135 MT1FP04733 61 aa11.17□□□□□ -0.62
CHKA-202ENST00000356135 CDC42SE1Q9NRR8 79 aa11.17□□□□□ -0.62
CHKA-202ENST00000356135 P0C880 135 aa11.16□□□□□ -0.62
CHKA-202ENST00000356135 KRTAP10-10P60014 251 aa11.12□□□□□ -0.63
CHKA-202ENST00000356135 SPATA8Q6RVD6 105 aa11.12□□□□□ -0.63
CHKA-202ENST00000356135 MIR22HGQ0VDD5 57 aa11.11□□□□□ -0.63
CHKA-202ENST00000356135 A8MU10 97 aa11.09□□□□□ -0.63
CHKA-202ENST00000356135 PRO0628Q9UI54 55 aa11.06□□□□□ -0.64
CHKA-202ENST00000356135 KRTAP13-4Q3LI77 160 aa10.96□□□□□ -0.65
CHKA-202ENST00000356135 KRTAP9-3Q9BYQ3 159 aa10.91□□□□□ -0.66
CHKA-202ENST00000356135 M0QZ58 72 aa10.9□□□□□ -0.67
CHKA-202ENST00000356135 CRIPTQ9P021 101 aa10.82□□□□□ -0.68
CHKA-202ENST00000356135 KRTAP19-1Q8IUB9 90 aa10.81□□□□□ -0.68
CHKA-202ENST00000356135 R4GN34 69 aa10.8□□□□□ -0.68
CHKA-202ENST00000356135 SPRR2GQ9BYE4 73 aa10.75□□□□□ -0.69
CHKA-202ENST00000356135 A0A0D9SG42 100 aa10.72□□□□□ -0.69
CHKA-202ENST00000356135 LCE2BO14633 110 aa10.7□□□□□ -0.7
CHKA-202ENST00000356135 LCE2DQ5TA82 110 aaPredicted RBP10.67□□□□□ -0.7
CHKA-202ENST00000356135 LINC01554Q52M75 96 aa10.64□□□□□ -0.71
CHKA-202ENST00000356135 PMAIP1Q13794 54 aa10.62□□□□□ -0.71
CHKA-202ENST00000356135 A6NN06 94 aa10.6□□□□□ -0.71
CHKA-202ENST00000356135 K7ERS5 55 aa10.59□□□□□ -0.71
CHKA-202ENST00000356135 KRTAP12-1P59990 96 aa10.56□□□□□ -0.72
CHKA-202ENST00000356135 USH2AO75445 5202 aa10.56□□□□□ -0.72
CHKA-202ENST00000356135 KRTAP19-8Q3LI54 63 aa10.54□□□□□ -0.72
CHKA-202ENST00000356135 KRTAP9-2Q9BYQ4 174 aa10.54□□□□□ -0.72
CHKA-202ENST00000356135 KRTAP12-2P59991 146 aa10.52□□□□□ -0.72
CHKA-202ENST00000356135 MT1BP07438 61 aa10.48□□□□□ -0.73
CHKA-202ENST00000356135 SPINT4Q6UDR6 99 aa10.46□□□□□ -0.74
CHKA-202ENST00000356135 FSIP2Q5CZC0 6907 aa10.45□□□□□ -0.74
CHKA-202ENST00000356135 PLAC4Q8WY50 150 aa10.31□□□□□ -0.76
CHKA-202ENST00000356135 SSPOA2VEC9 5147 aa10.29□□□□□ -0.76
CHKA-202ENST00000356135 SVIPQ8NHG7 77 aa10.25□□□□□ -0.77
CHKA-202ENST00000356135 KTN1-AS1Q86SY8 53 aa10.24□□□□□ -0.77
CHKA-202ENST00000356135 ROMO1P60602 79 aa10.18□□□□□ -0.78
CHKA-202ENST00000356135 CAMK2N1Q7Z7J9 78 aa10.11□□□□□ -0.79
CHKA-202ENST00000356135 KRTAP19-6Q3LI70 58 aa10.09□□□□□ -0.79
CHKA-202ENST00000356135 CRCT1Q9UGL9 99 aa10.09□□□□□ -0.79
CHKA-202ENST00000356135 MT1XP80297 61 aa10.04□□□□□ -0.8
CHKA-202ENST00000356135 KRTAP10-5P60370 271 aa10.02□□□□□ -0.81
CHKA-202ENST00000356135 C10orf95Q9H7T3 257 aa9.98□□□□□ -0.81
CHKA-202ENST00000356135 PRAC1Q96KF2 57 aa9.95□□□□□ -0.82
CHKA-202ENST00000356135 PRO2289Q9P1D8 64 aa9.9□□□□□ -0.82
CHKA-202ENST00000356135 FCGBPQ9Y6R7 5405 aaPredicted RBP9.9□□□□□ -0.82
CHKA-202ENST00000356135 KRTAP9-6A0A140TA67 174 aa9.86□□□□□ -0.83
CHKA-202ENST00000356135 KRTAP25-1Q3LHN0 102 aa9.74□□□□□ -0.85
CHKA-202ENST00000356135 TNP1P09430 55 aa9.65□□□□□ -0.87
CHKA-202ENST00000356135 KRTAP10-7P60409 375 aaPredicted RBP9.65□□□□□ -0.87
CHKA-202ENST00000356135 KRTAP10-12P60413 245 aa9.5□□□□□ -0.89
CHKA-202ENST00000356135 MACF1Q9UPN3 7388 aaKnown RBP9.49□□□□□ -0.89
CHKA-202ENST00000356135 KMT2DO14686 5537 aa9.48□□□□□ -0.89
CHKA-202ENST00000356135 KRTAP23-1A1A580 65 aa9.43□□□□□ -0.9
CHKA-202ENST00000356135 PP632Q6XCG6 107 aa9.43□□□□□ -0.9
CHKA-202ENST00000356135 KRTAP4-8A0A0G2JLE6 195 aa9.41□□□□□ -0.9
CHKA-202ENST00000356135 KRTAP4-8Q9BYQ9 185 aa9.41□□□□□ -0.9
CHKA-202ENST00000356135 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.36□□□□□ -0.91
CHKA-202ENST00000356135 SYNE2Q8WXH0 6885 aaKnown RBP9.3□□□□□ -0.92
CHKA-202ENST00000356135 LCE3AQ5TA76 89 aa9.23□□□□□ -0.93
CHKA-202ENST00000356135 KRTAP8-1Q8IUC2 63 aa9.19□□□□□ -0.94
CHKA-202ENST00000356135 KRTAP19-5Q3LI72 72 aa8.99□□□□□ -0.97
CHKA-202ENST00000356135 KRTAP6-3Q3LI67 103 aa8.98□□□□□ -0.97
CHKA-202ENST00000356135 KRTAP9-7A8MTY7 169 aa8.96□□□□□ -0.97
CHKA-202ENST00000356135 KRTAP19-7Q3SYF9 63 aa8.96□□□□□ -0.97
CHKA-202ENST00000356135 SPRR2FQ96RM1 72 aa8.96□□□□□ -0.98
CHKA-202ENST00000356135 KRTAP5-9P26371 169 aa8.94□□□□□ -0.98
CHKA-202ENST00000356135 KRTAP12-3P60328 96 aa8.87□□□□□ -0.99
CHKA-202ENST00000356135 MUC12Q9UKN1 5478 aa8.86□□□□□ -0.99
CHKA-202ENST00000356135 MT1EP04732 61 aa8.81□□□□□ -1
CHKA-202ENST00000356135 MDN1Q9NU22 5596 aa8.72□□□□□ -1.01
CHKA-202ENST00000356135 KRTAP15-1Q3LI76 137 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms