RNA–Protein interactions for RNA: ENST00000356020.2

LINC01565-201, Transcript of long intergenic non-protein coding RNA 1565, humanhuman

TSL 2 BASIC

Gene LINC01565, Length 2,697 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01565-201ENST00000356020 TNXBP22105 4242 aa8.06□□□□□ -1.12
LINC01565-201ENST00000356020 KRTAP3-3Q9BYR6 98 aa8.02□□□□□ -1.13
LINC01565-201ENST00000356020 LRP1Q07954 4544 aaKnown RBP8.01□□□□□ -1.13
LINC01565-201ENST00000356020 Q5VSD8 79 aa8□□□□□ -1.13
LINC01565-201ENST00000356020 XP32Q5T750 250 aa8□□□□□ -1.13
LINC01565-201ENST00000356020 CRIPTQ9P021 101 aa7.99□□□□□ -1.13
LINC01565-201ENST00000356020 KRTAP10-6P60371 365 aaPredicted RBP7.98□□□□□ -1.13
LINC01565-201ENST00000356020 S4R3F8 94 aa7.95□□□□□ -1.14
LINC01565-201ENST00000356020 HSPG2P98160 4391 aa7.95□□□□□ -1.14
LINC01565-201ENST00000356020 KMT2CQ8NEZ4 4911 aaKnown RBP7.92□□□□□ -1.14
LINC01565-201ENST00000356020 KRTAP3-2Q9BYR7 98 aa7.91□□□□□ -1.14
LINC01565-201ENST00000356020 P0C880 135 aa7.9□□□□□ -1.14
LINC01565-201ENST00000356020 KRTAP13-4Q3LI77 160 aa7.89□□□□□ -1.15
LINC01565-201ENST00000356020 DMBT1Q9UGM3 2413 aaPredicted RBP7.89□□□□□ -1.15
LINC01565-201ENST00000356020 A0A0D9SG42 100 aa7.85□□□□□ -1.15
LINC01565-201ENST00000356020 TPRXLQ17RH7 258 aa7.84□□□□□ -1.15
LINC01565-201ENST00000356020 SPINT4Q6UDR6 99 aa7.83□□□□□ -1.16
LINC01565-201ENST00000356020 MYCBP2O75592 4640 aa7.81□□□□□ -1.16
LINC01565-201ENST00000356020 MT1HL1P0DM35 61 aa7.81□□□□□ -1.16
LINC01565-201ENST00000356020 RYR1P21817 5038 aa7.8□□□□□ -1.16
LINC01565-201ENST00000356020 KRTAP17-1Q9BYP8 105 aa7.8□□□□□ -1.16
LINC01565-201ENST00000356020 C10orf95Q9H7T3 257 aa7.7□□□□□ -1.18
LINC01565-201ENST00000356020 KRTAP15-1Q3LI76 137 aa7.68□□□□□ -1.18
LINC01565-201ENST00000356020 KRTAP12-2P59991 146 aa7.66□□□□□ -1.18
LINC01565-201ENST00000356020 RYR3Q15413 4870 aa7.65□□□□□ -1.19
LINC01565-201ENST00000356020 KRTAP12-1P59990 96 aa7.63□□□□□ -1.19
LINC01565-201ENST00000356020 KIAA1109Q2LD37 5005 aa7.62□□□□□ -1.19
LINC01565-201ENST00000356020 LPAP08519 4548 aa7.6□□□□□ -1.19
LINC01565-201ENST00000356020 M0QZ58 72 aa7.58□□□□□ -1.2
LINC01565-201ENST00000356020 LRP2P98164 4655 aa7.57□□□□□ -1.2
LINC01565-201ENST00000356020 NDUFAF8A1L188 74 aa7.56□□□□□ -1.2
LINC01565-201ENST00000356020 SEC61BP60468 96 aaKnown RBP7.39□□□□□ -1.23
LINC01565-201ENST00000356020 EPPK1P58107 5090 aaKnown RBP7.37□□□□□ -1.23
LINC01565-201ENST00000356020 KRTAP4-5Q9BYR2 181 aa7.36□□□□□ -1.23
LINC01565-201ENST00000356020 R4GN34 69 aa7.36□□□□□ -1.23
LINC01565-201ENST00000356020 ABCA13Q86UQ4 5058 aa7.33□□□□□ -1.24
LINC01565-201ENST00000356020 MUC17Q685J3 4493 aa7.33□□□□□ -1.24
LINC01565-201ENST00000356020 KRTAP4-1Q9BYQ7 146 aa7.27□□□□□ -1.25
LINC01565-201ENST00000356020 LORP23490 312 aaPredicted RBP7.24□□□□□ -1.25
LINC01565-201ENST00000356020 PLAC4Q8WY50 150 aa7.2□□□□□ -1.26
LINC01565-201ENST00000356020 J3QL48 77 aa7.18□□□□□ -1.26
LINC01565-201ENST00000356020 KRTAP19-2Q3LHN2 52 aa7.18□□□□□ -1.26
LINC01565-201ENST00000356020 PP632Q6XCG6 107 aa7.11□□□□□ -1.27
LINC01565-201ENST00000356020 HERC2O95714 4834 aa7□□□□□ -1.29
LINC01565-201ENST00000356020 CAMK2N1Q7Z7J9 78 aa6.99□□□□□ -1.29
LINC01565-201ENST00000356020 LUZP6Q538Z0 58 aa6.99□□□□□ -1.29
LINC01565-201ENST00000356020 FLGP20930 4061 aaPredicted RBP6.93□□□□□ -1.3
LINC01565-201ENST00000356020 BIRC6Q9NR09 4857 aa6.91□□□□□ -1.3
LINC01565-201ENST00000356020 A0A0A0MQY5 61 aa6.87□□□□□ -1.31
LINC01565-201ENST00000356020 HERC1Q15751 4861 aa6.84□□□□□ -1.31
LINC01565-201ENST00000356020 KRTAP23-1A1A580 65 aa6.82□□□□□ -1.32
LINC01565-201ENST00000356020 MUC2Q02817 5179 aa6.78□□□□□ -1.32
LINC01565-201ENST00000356020 TNP1P09430 55 aa6.76□□□□□ -1.33
LINC01565-201ENST00000356020 SPRR5A0A1B0GTR4 108 aa6.7□□□□□ -1.34
LINC01565-201ENST00000356020 LCE2CQ5TA81 110 aa6.7□□□□□ -1.34
LINC01565-201ENST00000356020 PCLOQ9Y6V0 5065 aa6.67□□□□□ -1.34
LINC01565-201ENST00000356020 HMCN2Q8NDA2 5059 aa6.65□□□□□ -1.34
LINC01565-201ENST00000356020 SPRR2GQ9BYE4 73 aa6.65□□□□□ -1.35
LINC01565-201ENST00000356020 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
LINC01565-201ENST00000356020 M0R2T5 61 aa6.53□□□□□ -1.36
LINC01565-201ENST00000356020 MT1HP80294 61 aa6.52□□□□□ -1.37
LINC01565-201ENST00000356020 FAT4Q6V0I7 4981 aa6.5□□□□□ -1.37
LINC01565-201ENST00000356020 MT2AP02795 61 aa6.44□□□□□ -1.38
LINC01565-201ENST00000356020 MT1FP04733 61 aa6.44□□□□□ -1.38
LINC01565-201ENST00000356020 KRTAP10-10P60014 251 aa6.42□□□□□ -1.38
LINC01565-201ENST00000356020 LCE3AQ5TA76 89 aa6.38□□□□□ -1.39
LINC01565-201ENST00000356020 KRTAP9-8Q9BYQ0 159 aa6.38□□□□□ -1.39
LINC01565-201ENST00000356020 KRTAP19-8Q3LI54 63 aa6.35□□□□□ -1.39
LINC01565-201ENST00000356020 RNF213Q63HN8 5207 aa6.35□□□□□ -1.39
LINC01565-201ENST00000356020 PRO2289Q9P1D8 64 aa6.26□□□□□ -1.41
LINC01565-201ENST00000356020 MT1BP07438 61 aa6.25□□□□□ -1.41
LINC01565-201ENST00000356020 KRTAP8-1Q8IUC2 63 aa6.25□□□□□ -1.41
LINC01565-201ENST00000356020 UBR4Q5T4S7 5183 aa6.25□□□□□ -1.41
LINC01565-201ENST00000356020 KRTAP10-5P60370 271 aa6.23□□□□□ -1.41
LINC01565-201ENST00000356020 MT1XP80297 61 aa6.22□□□□□ -1.41
LINC01565-201ENST00000356020 INE1O15225 51 aa6.21□□□□□ -1.42
LINC01565-201ENST00000356020 KRTAP10-12P60413 245 aa6.13□□□□□ -1.43
LINC01565-201ENST00000356020 KRTAP9-3Q9BYQ3 159 aa6.11□□□□□ -1.43
LINC01565-201ENST00000356020 KRTAP12-3P60328 96 aa6.08□□□□□ -1.44
LINC01565-201ENST00000356020 KRTAP10-7P60409 375 aaPredicted RBP6.04□□□□□ -1.44
LINC01565-201ENST00000356020 LCE2BO14633 110 aa5.84□□□□□ -1.47
LINC01565-201ENST00000356020 KRTAP19-5Q3LI72 72 aa5.8□□□□□ -1.48
LINC01565-201ENST00000356020 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
LINC01565-201ENST00000356020 LCE2AQ5TA79 106 aaPredicted RBP5.7□□□□□ -1.5
LINC01565-201ENST00000356020 KRTAP4-8A0A0G2JLE6 195 aa5.62□□□□□ -1.51
LINC01565-201ENST00000356020 KRTAP4-8Q9BYQ9 185 aa5.62□□□□□ -1.51
LINC01565-201ENST00000356020 USH2AO75445 5202 aa5.58□□□□□ -1.52
LINC01565-201ENST00000356020 KMT2DO14686 5537 aa5.54□□□□□ -1.52
LINC01565-201ENST00000356020 KRTAP19-7Q3SYF9 63 aa5.54□□□□□ -1.52
LINC01565-201ENST00000356020 KRTAP9-6A8MVA2 160 aa5.51□□□□□ -1.53
LINC01565-201ENST00000356020 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
LINC01565-201ENST00000356020 KRTAP2-3P0C7H8 128 aa5.44□□□□□ -1.54
LINC01565-201ENST00000356020 KRTAP2-4Q9BYR9 128 aa5.44□□□□□ -1.54
LINC01565-201ENST00000356020 KRTAP2-1Q9BYU5 128 aa5.44□□□□□ -1.54
LINC01565-201ENST00000356020 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
LINC01565-201ENST00000356020 MT1LQ93083 61 aa5.39□□□□□ -1.55
LINC01565-201ENST00000356020 MT1EP04732 61 aa5.39□□□□□ -1.55
LINC01565-201ENST00000356020 FSIP2Q5CZC0 6907 aa5.37□□□□□ -1.55
LINC01565-201ENST00000356020 SSPOA2VEC9 5147 aa5.3□□□□□ -1.56
LINC01565-201ENST00000356020 KRTAP19-6Q3LI70 58 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms