RNA–Protein interactions for RNA: ENST00000352260.11

SPNS1-204, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-204ENST00000352260 MYCBP2O75592 4640 aa10.25□□□□□ -0.77
SPNS1-204ENST00000352260 KRTAP10-8P60410 259 aa10.23□□□□□ -0.77
SPNS1-204ENST00000352260 LRP1Q07954 4544 aaKnown RBP10.22□□□□□ -0.77
SPNS1-204ENST00000352260 FAT3Q8TDW7 4589 aa10.2□□□□□ -0.78
SPNS1-204ENST00000352260 A8MUU9 505 aa10.15□□□□□ -0.78
SPNS1-204ENST00000352260 C9orf92A6NGG3 77 aa10.12□□□□□ -0.79
SPNS1-204ENST00000352260 DMBT1Q9UGM3 2413 aaPredicted RBP10.12□□□□□ -0.79
SPNS1-204ENST00000352260 KRTAP25-1Q3LHN0 102 aa10.11□□□□□ -0.79
SPNS1-204ENST00000352260 H0YAA0 97 aa10.06□□□□□ -0.8
SPNS1-204ENST00000352260 C20orf166-AS1Q96NR2 134 aa10.05□□□□□ -0.8
SPNS1-204ENST00000352260 MT1HL1P0DM35 61 aa10.03□□□□□ -0.8
SPNS1-204ENST00000352260 HERC1Q15751 4861 aa10.02□□□□□ -0.81
SPNS1-204ENST00000352260 A0A1B0GU33 70 aa9.99□□□□□ -0.81
SPNS1-204ENST00000352260 ROMO1P60602 79 aa9.98□□□□□ -0.81
SPNS1-204ENST00000352260 H1FX-AS1Q4G0G2 97 aa9.95□□□□□ -0.82
SPNS1-204ENST00000352260 J3QL48 77 aa9.93□□□□□ -0.82
SPNS1-204ENST00000352260 K7ERS5 55 aa9.92□□□□□ -0.82
SPNS1-204ENST00000352260 XP32Q5T750 250 aa9.79□□□□□ -0.84
SPNS1-204ENST00000352260 RPL37P61927 97 aaKnown RBP9.78□□□□□ -0.84
SPNS1-204ENST00000352260 KRTAP3-1Q9BYR8 98 aa9.75□□□□□ -0.85
SPNS1-204ENST00000352260 COX6B2Q6YFQ2 88 aa9.68□□□□□ -0.86
SPNS1-204ENST00000352260 HMCN2Q8NDA2 5059 aa9.67□□□□□ -0.86
SPNS1-204ENST00000352260 TPRXLQ17RH7 258 aa9.64□□□□□ -0.87
SPNS1-204ENST00000352260 P0C880 135 aa9.6□□□□□ -0.87
SPNS1-204ENST00000352260 LPAP08519 4548 aa9.51□□□□□ -0.89
SPNS1-204ENST00000352260 CRIPTQ9P021 101 aa9.51□□□□□ -0.89
SPNS1-204ENST00000352260 LRP2P98164 4655 aa9.49□□□□□ -0.89
SPNS1-204ENST00000352260 UBR4Q5T4S7 5183 aa9.46□□□□□ -0.9
SPNS1-204ENST00000352260 KRTAP10-6P60371 365 aaPredicted RBP9.44□□□□□ -0.9
SPNS1-204ENST00000352260 SPINT4Q6UDR6 99 aa9.43□□□□□ -0.9
SPNS1-204ENST00000352260 KRTAP15-1Q3LI76 137 aa9.33□□□□□ -0.92
SPNS1-204ENST00000352260 KRTAP13-4Q3LI77 160 aa9.33□□□□□ -0.92
SPNS1-204ENST00000352260 KRTAP3-3Q9BYR6 98 aa9.33□□□□□ -0.92
SPNS1-204ENST00000352260 KRTAP3-2Q9BYR7 98 aa9.33□□□□□ -0.92
SPNS1-204ENST00000352260 SEC61BP60468 96 aaKnown RBP9.3□□□□□ -0.92
SPNS1-204ENST00000352260 RNF213Q63HN8 5207 aa9.27□□□□□ -0.93
SPNS1-204ENST00000352260 A0A0D9SG42 100 aa9.26□□□□□ -0.93
SPNS1-204ENST00000352260 MUC17Q685J3 4493 aa9.25□□□□□ -0.93
SPNS1-204ENST00000352260 S4R3F8 94 aa9.25□□□□□ -0.93
SPNS1-204ENST00000352260 C10orf95Q9H7T3 257 aa9.17□□□□□ -0.94
SPNS1-204ENST00000352260 NDUFAF8A1L188 74 aa9.17□□□□□ -0.94
SPNS1-204ENST00000352260 KRTAP4-1Q9BYQ7 146 aa9.17□□□□□ -0.94
SPNS1-204ENST00000352260 MUC2Q02817 5179 aa9.17□□□□□ -0.94
SPNS1-204ENST00000352260 KRTAP12-2P59991 146 aa9.1□□□□□ -0.95
SPNS1-204ENST00000352260 KRTAP12-1P59990 96 aa9.07□□□□□ -0.96
SPNS1-204ENST00000352260 M0QZ58 72 aa9.03□□□□□ -0.96
SPNS1-204ENST00000352260 KRTAP19-2Q3LHN2 52 aa8.95□□□□□ -0.98
SPNS1-204ENST00000352260 FAT4Q6V0I7 4981 aa8.77□□□□□ -1.01
SPNS1-204ENST00000352260 FLGP20930 4061 aaPredicted RBP8.76□□□□□ -1.01
SPNS1-204ENST00000352260 PLAC4Q8WY50 150 aa8.68□□□□□ -1.02
SPNS1-204ENST00000352260 LCE2CQ5TA81 110 aa8.62□□□□□ -1.03
SPNS1-204ENST00000352260 LCE2AQ5TA79 106 aaPredicted RBP8.6□□□□□ -1.03
SPNS1-204ENST00000352260 A0A0A0MQY5 61 aa8.57□□□□□ -1.04
SPNS1-204ENST00000352260 PP632Q6XCG6 107 aa8.56□□□□□ -1.04
SPNS1-204ENST00000352260 R4GN34 69 aa8.56□□□□□ -1.04
SPNS1-204ENST00000352260 LORP23490 312 aaPredicted RBP8.54□□□□□ -1.04
SPNS1-204ENST00000352260 LUZP6Q538Z0 58 aa8.53□□□□□ -1.04
SPNS1-204ENST00000352260 MT1HP80294 61 aa8.42□□□□□ -1.06
SPNS1-204ENST00000352260 M0R2T5 61 aa8.35□□□□□ -1.07
SPNS1-204ENST00000352260 KRTAP23-1A1A580 65 aa8.23□□□□□ -1.09
SPNS1-204ENST00000352260 CAMK2N1Q7Z7J9 78 aa8.17□□□□□ -1.1
SPNS1-204ENST00000352260 MT2AP02795 61 aa8.17□□□□□ -1.1
SPNS1-204ENST00000352260 KRTAP9-8Q9BYQ0 159 aa8.15□□□□□ -1.1
SPNS1-204ENST00000352260 MT1FP04733 61 aa8.13□□□□□ -1.11
SPNS1-204ENST00000352260 KRTAP9-2Q9BYQ4 174 aa8.12□□□□□ -1.11
SPNS1-204ENST00000352260 SPRR5A0A1B0GTR4 108 aa8.11□□□□□ -1.11
SPNS1-204ENST00000352260 SPRR2GQ9BYE4 73 aa8.11□□□□□ -1.11
SPNS1-204ENST00000352260 KRTAP10-10P60014 251 aa8.09□□□□□ -1.11
SPNS1-204ENST00000352260 KRTAP19-1Q8IUB9 90 aa8.09□□□□□ -1.11
SPNS1-204ENST00000352260 TNP1P09430 55 aa8.01□□□□□ -1.13
SPNS1-204ENST00000352260 LCE2DQ5TA82 110 aaPredicted RBP8.01□□□□□ -1.13
SPNS1-204ENST00000352260 FSIP2Q5CZC0 6907 aa7.97□□□□□ -1.13
SPNS1-204ENST00000352260 KRTAP19-8Q3LI54 63 aa7.86□□□□□ -1.15
SPNS1-204ENST00000352260 KRTAP9-3Q9BYQ3 159 aa7.84□□□□□ -1.15
SPNS1-204ENST00000352260 MT1BP07438 61 aa7.76□□□□□ -1.17
SPNS1-204ENST00000352260 KRTAP9-6A0A140TA67 174 aa7.72□□□□□ -1.17
SPNS1-204ENST00000352260 PRO2289Q9P1D8 64 aa7.71□□□□□ -1.18
SPNS1-204ENST00000352260 USH2AO75445 5202 aa7.71□□□□□ -1.18
SPNS1-204ENST00000352260 CRCT1Q9UGL9 99 aa7.7□□□□□ -1.18
SPNS1-204ENST00000352260 LCE2BO14633 110 aa7.68□□□□□ -1.18
SPNS1-204ENST00000352260 INE1O15225 51 aa7.62□□□□□ -1.19
SPNS1-204ENST00000352260 SSPOA2VEC9 5147 aa7.57□□□□□ -1.2
SPNS1-204ENST00000352260 KRTAP10-5P60370 271 aa7.56□□□□□ -1.2
SPNS1-204ENST00000352260 MT1XP80297 61 aa7.56□□□□□ -1.2
SPNS1-204ENST00000352260 LCE3AQ5TA76 89 aa7.41□□□□□ -1.22
SPNS1-204ENST00000352260 FCGBPQ9Y6R7 5405 aaPredicted RBP7.38□□□□□ -1.23
SPNS1-204ENST00000352260 KRTAP8-1Q8IUC2 63 aa7.37□□□□□ -1.23
SPNS1-204ENST00000352260 KRTAP19-6Q3LI70 58 aa7.32□□□□□ -1.24
SPNS1-204ENST00000352260 KRTAP10-7P60409 375 aaPredicted RBP7.29□□□□□ -1.24
SPNS1-204ENST00000352260 KRTAP10-12P60413 245 aa7.25□□□□□ -1.25
SPNS1-204ENST00000352260 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.17□□□□□ -1.26
SPNS1-204ENST00000352260 MACF1Q9UPN3 7388 aaKnown RBP7.12□□□□□ -1.27
SPNS1-204ENST00000352260 KRTAP12-3P60328 96 aa7.1□□□□□ -1.27
SPNS1-204ENST00000352260 SYNE2Q8WXH0 6885 aaKnown RBP7.04□□□□□ -1.28
SPNS1-204ENST00000352260 KRTAP9-7A8MTY7 169 aa6.99□□□□□ -1.29
SPNS1-204ENST00000352260 KRTAP4-8A0A0G2JLE6 195 aa6.94□□□□□ -1.3
SPNS1-204ENST00000352260 KRTAP4-8Q9BYQ9 185 aa6.94□□□□□ -1.3
SPNS1-204ENST00000352260 KMT2DO14686 5537 aa6.92□□□□□ -1.3
SPNS1-204ENST00000352260 KRTAP19-5Q3LI72 72 aa6.91□□□□□ -1.3
SPNS1-204ENST00000352260 KRTAP6-3Q3LI67 103 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 189.9 ms