RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 KRTAP17-1Q9BYP8 105 aa7.57□□□□□ -1.2
ARHGEF1-202ENST00000347545 RYR3Q15413 4870 aa7.56□□□□□ -1.2
ARHGEF1-202ENST00000347545 A0A1B0GU33 70 aa7.56□□□□□ -1.2
ARHGEF1-202ENST00000347545 H1FX-AS1Q4G0G2 97 aa7.56□□□□□ -1.2
ARHGEF1-202ENST00000347545 DMBT1Q9UGM3 2413 aaPredicted RBP7.56□□□□□ -1.2
ARHGEF1-202ENST00000347545 RYR1P21817 5038 aa7.55□□□□□ -1.2
ARHGEF1-202ENST00000347545 MYCBP2O75592 4640 aa7.53□□□□□ -1.2
ARHGEF1-202ENST00000347545 Q5VSD8 79 aa7.52□□□□□ -1.21
ARHGEF1-202ENST00000347545 ROMO1P60602 79 aa7.51□□□□□ -1.21
ARHGEF1-202ENST00000347545 KRTAP3-3Q9BYR6 98 aa7.5□□□□□ -1.21
ARHGEF1-202ENST00000347545 RPL37P61927 97 aaKnown RBP7.49□□□□□ -1.21
ARHGEF1-202ENST00000347545 XP32Q5T750 250 aa7.48□□□□□ -1.21
ARHGEF1-202ENST00000347545 KRTAP10-6P60371 365 aaPredicted RBP7.42□□□□□ -1.22
ARHGEF1-202ENST00000347545 KIAA1109Q2LD37 5005 aa7.41□□□□□ -1.22
ARHGEF1-202ENST00000347545 MT1HL1P0DM35 61 aa7.39□□□□□ -1.23
ARHGEF1-202ENST00000347545 LPAP08519 4548 aa7.39□□□□□ -1.23
ARHGEF1-202ENST00000347545 KRTAP3-2Q9BYR7 98 aa7.38□□□□□ -1.23
ARHGEF1-202ENST00000347545 P0C880 135 aa7.38□□□□□ -1.23
ARHGEF1-202ENST00000347545 KRTAP13-4Q3LI77 160 aa7.37□□□□□ -1.23
ARHGEF1-202ENST00000347545 K7ERS5 55 aa7.33□□□□□ -1.24
ARHGEF1-202ENST00000347545 S4R3F8 94 aa7.33□□□□□ -1.24
ARHGEF1-202ENST00000347545 A0A0D9SG42 100 aa7.32□□□□□ -1.24
ARHGEF1-202ENST00000347545 LRP2P98164 4655 aa7.3□□□□□ -1.24
ARHGEF1-202ENST00000347545 A0A0A0MQY5 61 aa7.28□□□□□ -1.24
ARHGEF1-202ENST00000347545 EPPK1P58107 5090 aaKnown RBP7.28□□□□□ -1.24
ARHGEF1-202ENST00000347545 SPINT4Q6UDR6 99 aa7.26□□□□□ -1.25
ARHGEF1-202ENST00000347545 C10orf95Q9H7T3 257 aa7.26□□□□□ -1.25
ARHGEF1-202ENST00000347545 ABCA13Q86UQ4 5058 aa7.22□□□□□ -1.25
ARHGEF1-202ENST00000347545 TPRXLQ17RH7 258 aa7.21□□□□□ -1.25
ARHGEF1-202ENST00000347545 NDUFAF8A1L188 74 aa7.12□□□□□ -1.27
ARHGEF1-202ENST00000347545 KRTAP12-2P59991 146 aa7.09□□□□□ -1.27
ARHGEF1-202ENST00000347545 KRTAP4-5Q9BYR2 181 aa7.09□□□□□ -1.27
ARHGEF1-202ENST00000347545 MUC17Q685J3 4493 aa7.05□□□□□ -1.28
ARHGEF1-202ENST00000347545 KRTAP12-1P59990 96 aa7.04□□□□□ -1.28
ARHGEF1-202ENST00000347545 KRTAP15-1Q3LI76 137 aa6.98□□□□□ -1.29
ARHGEF1-202ENST00000347545 M0QZ58 72 aa6.93□□□□□ -1.3
ARHGEF1-202ENST00000347545 KRTAP4-1Q9BYQ7 146 aa6.92□□□□□ -1.3
ARHGEF1-202ENST00000347545 LORP23490 312 aaPredicted RBP6.84□□□□□ -1.31
ARHGEF1-202ENST00000347545 SEC61BP60468 96 aaKnown RBP6.83□□□□□ -1.32
ARHGEF1-202ENST00000347545 KRTAP19-2Q3LHN2 52 aa6.82□□□□□ -1.32
ARHGEF1-202ENST00000347545 HERC2O95714 4834 aa6.81□□□□□ -1.32
ARHGEF1-202ENST00000347545 R4GN34 69 aa6.77□□□□□ -1.33
ARHGEF1-202ENST00000347545 J3QL48 77 aa6.71□□□□□ -1.34
ARHGEF1-202ENST00000347545 MUC2Q02817 5179 aa6.69□□□□□ -1.34
ARHGEF1-202ENST00000347545 BIRC6Q9NR09 4857 aa6.67□□□□□ -1.34
ARHGEF1-202ENST00000347545 FLGP20930 4061 aaPredicted RBP6.65□□□□□ -1.35
ARHGEF1-202ENST00000347545 LUZP6Q538Z0 58 aa6.61□□□□□ -1.35
ARHGEF1-202ENST00000347545 PLAC4Q8WY50 150 aa6.55□□□□□ -1.36
ARHGEF1-202ENST00000347545 PCLOQ9Y6V0 5065 aa6.53□□□□□ -1.36
ARHGEF1-202ENST00000347545 HERC1Q15751 4861 aa6.52□□□□□ -1.37
ARHGEF1-202ENST00000347545 HMCN2Q8NDA2 5059 aa6.5□□□□□ -1.37
ARHGEF1-202ENST00000347545 CAMK2N1Q7Z7J9 78 aa6.4□□□□□ -1.38
ARHGEF1-202ENST00000347545 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
ARHGEF1-202ENST00000347545 FAT4Q6V0I7 4981 aa6.37□□□□□ -1.39
ARHGEF1-202ENST00000347545 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
ARHGEF1-202ENST00000347545 RNF213Q63HN8 5207 aa6.22□□□□□ -1.41
ARHGEF1-202ENST00000347545 KRTAP19-1Q8IUB9 90 aa6.22□□□□□ -1.41
ARHGEF1-202ENST00000347545 SPRR2GQ9BYE4 73 aa6.21□□□□□ -1.42
ARHGEF1-202ENST00000347545 UBR4Q5T4S7 5183 aa6.18□□□□□ -1.42
ARHGEF1-202ENST00000347545 TNP1P09430 55 aa6.17□□□□□ -1.42
ARHGEF1-202ENST00000347545 MT1HP80294 61 aa6.17□□□□□ -1.42
ARHGEF1-202ENST00000347545 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
ARHGEF1-202ENST00000347545 MT1FP04733 61 aa6.1□□□□□ -1.43
ARHGEF1-202ENST00000347545 MT2AP02795 61 aa6.09□□□□□ -1.44
ARHGEF1-202ENST00000347545 M0R2T5 61 aa6.08□□□□□ -1.44
ARHGEF1-202ENST00000347545 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
ARHGEF1-202ENST00000347545 KRTAP10-10P60014 251 aa6□□□□□ -1.45
ARHGEF1-202ENST00000347545 SPRR5A0A1B0GTR4 108 aa5.97□□□□□ -1.45
ARHGEF1-202ENST00000347545 LCE3AQ5TA76 89 aa5.95□□□□□ -1.46
ARHGEF1-202ENST00000347545 KRTAP19-8Q3LI54 63 aa5.94□□□□□ -1.46
ARHGEF1-202ENST00000347545 MT1BP07438 61 aa5.9□□□□□ -1.46
ARHGEF1-202ENST00000347545 KRTAP10-5P60370 271 aa5.87□□□□□ -1.47
ARHGEF1-202ENST00000347545 MT1XP80297 61 aa5.85□□□□□ -1.47
ARHGEF1-202ENST00000347545 KRTAP9-3Q9BYQ3 159 aa5.79□□□□□ -1.48
ARHGEF1-202ENST00000347545 KRTAP8-1Q8IUC2 63 aa5.78□□□□□ -1.48
ARHGEF1-202ENST00000347545 PRO2289Q9P1D8 64 aa5.75□□□□□ -1.49
ARHGEF1-202ENST00000347545 KRTAP10-7P60409 375 aaPredicted RBP5.7□□□□□ -1.5
ARHGEF1-202ENST00000347545 KRTAP10-12P60413 245 aa5.67□□□□□ -1.5
ARHGEF1-202ENST00000347545 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
ARHGEF1-202ENST00000347545 LCE2BO14633 110 aa5.58□□□□□ -1.52
ARHGEF1-202ENST00000347545 USH2AO75445 5202 aa5.51□□□□□ -1.53
ARHGEF1-202ENST00000347545 INE1O15225 51 aa5.46□□□□□ -1.53
ARHGEF1-202ENST00000347545 LCE2AQ5TA79 106 aaPredicted RBP5.46□□□□□ -1.54
ARHGEF1-202ENST00000347545 KMT2DO14686 5537 aa5.44□□□□□ -1.54
ARHGEF1-202ENST00000347545 KRTAP19-5Q3LI72 72 aa5.44□□□□□ -1.54
ARHGEF1-202ENST00000347545 KRTAP4-8A0A0G2JLE6 195 aa5.35□□□□□ -1.55
ARHGEF1-202ENST00000347545 KRTAP4-8Q9BYQ9 185 aa5.35□□□□□ -1.55
ARHGEF1-202ENST00000347545 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
ARHGEF1-202ENST00000347545 KRTAP19-7Q3SYF9 63 aa5.22□□□□□ -1.57
ARHGEF1-202ENST00000347545 KRTAP9-6A8MVA2 160 aa5.21□□□□□ -1.58
ARHGEF1-202ENST00000347545 SSPOA2VEC9 5147 aa5.19□□□□□ -1.58
ARHGEF1-202ENST00000347545 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
ARHGEF1-202ENST00000347545 MT1EP04732 61 aa5.06□□□□□ -1.6
ARHGEF1-202ENST00000347545 MT1LQ93083 61 aa5.05□□□□□ -1.6
ARHGEF1-202ENST00000347545 FSIP2Q5CZC0 6907 aa5.02□□□□□ -1.61
ARHGEF1-202ENST00000347545 KRTAP2-3P0C7H8 128 aa4.97□□□□□ -1.61
ARHGEF1-202ENST00000347545 KRTAP2-4Q9BYR9 128 aa4.97□□□□□ -1.61
ARHGEF1-202ENST00000347545 KRTAP2-1Q9BYU5 128 aa4.97□□□□□ -1.61
ARHGEF1-202ENST00000347545 KRTAP19-6Q3LI70 58 aa4.96□□□□□ -1.61
ARHGEF1-202ENST00000347545 KRTAP19-4Q3LI73 84 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms