RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 TPRXLQ17RH7 258 aa8.84□□□□□ -0.99
SMARCC2-202ENST00000347471 PMAIP1Q13794 54 aa8.81□□□□□ -1
SMARCC2-202ENST00000347471 UQCR11O14957 56 aa8.76□□□□□ -1.01
SMARCC2-202ENST00000347471 CDC42SE1Q9NRR8 79 aa8.76□□□□□ -1.01
SMARCC2-202ENST00000347471 BIRC6Q9NR09 4857 aa8.75□□□□□ -1.01
SMARCC2-202ENST00000347471 S4R3F8 94 aa8.74□□□□□ -1.01
SMARCC2-202ENST00000347471 MIR22HGQ0VDD5 57 aa8.74□□□□□ -1.01
SMARCC2-202ENST00000347471 SVIPQ8NHG7 77 aa8.74□□□□□ -1.01
SMARCC2-202ENST00000347471 RBM12B-AS1Q9P1G2 102 aa8.73□□□□□ -1.01
SMARCC2-202ENST00000347471 SEC61BP60468 96 aaKnown RBP8.68□□□□□ -1.02
SMARCC2-202ENST00000347471 SPATA8Q6RVD6 105 aa8.66□□□□□ -1.02
SMARCC2-202ENST00000347471 A0A1B0GU33 70 aa8.64□□□□□ -1.03
SMARCC2-202ENST00000347471 H1FX-AS1Q4G0G2 97 aa8.63□□□□□ -1.03
SMARCC2-202ENST00000347471 HERC1Q15751 4861 aa8.61□□□□□ -1.03
SMARCC2-202ENST00000347471 A0A0D9SG42 100 aa8.58□□□□□ -1.04
SMARCC2-202ENST00000347471 KRTAP3-3Q9BYR6 98 aa8.57□□□□□ -1.04
SMARCC2-202ENST00000347471 PCLOQ9Y6V0 5065 aa8.56□□□□□ -1.04
SMARCC2-202ENST00000347471 MUC2Q02817 5179 aa8.55□□□□□ -1.04
SMARCC2-202ENST00000347471 CSAG1Q6PB30 78 aa8.52□□□□□ -1.04
SMARCC2-202ENST00000347471 KRTAP4-1Q9BYQ7 146 aa8.52□□□□□ -1.05
SMARCC2-202ENST00000347471 ADM2Q7Z4H4 148 aa8.51□□□□□ -1.05
SMARCC2-202ENST00000347471 H0YAA0 97 aa8.5□□□□□ -1.05
SMARCC2-202ENST00000347471 P0C880 135 aa8.49□□□□□ -1.05
SMARCC2-202ENST00000347471 A6NN06 94 aa8.41□□□□□ -1.06
SMARCC2-202ENST00000347471 LINC01554Q52M75 96 aa8.4□□□□□ -1.06
SMARCC2-202ENST00000347471 KRTAP10-6P60371 365 aaPredicted RBP8.39□□□□□ -1.07
SMARCC2-202ENST00000347471 KRTAP13-4Q3LI77 160 aa8.34□□□□□ -1.07
SMARCC2-202ENST00000347471 PRAC1Q96KF2 57 aa8.34□□□□□ -1.07
SMARCC2-202ENST00000347471 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
SMARCC2-202ENST00000347471 K7ERS5 55 aa8.33□□□□□ -1.08
SMARCC2-202ENST00000347471 KTN1-AS1Q86SY8 53 aa8.31□□□□□ -1.08
SMARCC2-202ENST00000347471 SPINT4Q6UDR6 99 aa8.3□□□□□ -1.08
SMARCC2-202ENST00000347471 RNF213Q63HN8 5207 aa8.24□□□□□ -1.09
SMARCC2-202ENST00000347471 HMCN2Q8NDA2 5059 aa8.24□□□□□ -1.09
SMARCC2-202ENST00000347471 M0QZ58 72 aa8.23□□□□□ -1.09
SMARCC2-202ENST00000347471 CRIPTQ9P021 101 aa8.22□□□□□ -1.09
SMARCC2-202ENST00000347471 R4GN34 69 aa8.22□□□□□ -1.09
SMARCC2-202ENST00000347471 MUC17Q685J3 4493 aa8.21□□□□□ -1.1
SMARCC2-202ENST00000347471 FAT4Q6V0I7 4981 aa8.19□□□□□ -1.1
SMARCC2-202ENST00000347471 M0R2T5 61 aa8.18□□□□□ -1.1
SMARCC2-202ENST00000347471 UBR4Q5T4S7 5183 aa8.17□□□□□ -1.1
SMARCC2-202ENST00000347471 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
SMARCC2-202ENST00000347471 KRTAP12-2P59991 146 aa8.06□□□□□ -1.12
SMARCC2-202ENST00000347471 KRTAP19-2Q3LHN2 52 aa8.02□□□□□ -1.13
SMARCC2-202ENST00000347471 KRTAP12-1P59990 96 aa7.96□□□□□ -1.14
SMARCC2-202ENST00000347471 ROMO1P60602 79 aa7.93□□□□□ -1.14
SMARCC2-202ENST00000347471 FLGP20930 4061 aaPredicted RBP7.85□□□□□ -1.15
SMARCC2-202ENST00000347471 CAMK2N1Q7Z7J9 78 aa7.85□□□□□ -1.15
SMARCC2-202ENST00000347471 C10orf95Q9H7T3 257 aa7.84□□□□□ -1.15
SMARCC2-202ENST00000347471 LCE2CQ5TA81 110 aa7.83□□□□□ -1.16
SMARCC2-202ENST00000347471 MT1HP80294 61 aa7.76□□□□□ -1.17
SMARCC2-202ENST00000347471 KRTAP10-10P60014 251 aa7.75□□□□□ -1.17
SMARCC2-202ENST00000347471 KRTAP25-1Q3LHN0 102 aa7.75□□□□□ -1.17
SMARCC2-202ENST00000347471 MT1FP04733 61 aa7.56□□□□□ -1.2
SMARCC2-202ENST00000347471 MT2AP02795 61 aa7.54□□□□□ -1.2
SMARCC2-202ENST00000347471 PLAC4Q8WY50 150 aa7.54□□□□□ -1.2
SMARCC2-202ENST00000347471 KRTAP9-8Q9BYQ0 159 aa7.45□□□□□ -1.22
SMARCC2-202ENST00000347471 KRTAP19-1Q8IUB9 90 aa7.44□□□□□ -1.22
SMARCC2-202ENST00000347471 SPRR2GQ9BYE4 73 aa7.37□□□□□ -1.23
SMARCC2-202ENST00000347471 TNP1P09430 55 aa7.31□□□□□ -1.24
SMARCC2-202ENST00000347471 USH2AO75445 5202 aa7.22□□□□□ -1.25
SMARCC2-202ENST00000347471 KRTAP9-3Q9BYQ3 159 aa7.14□□□□□ -1.27
SMARCC2-202ENST00000347471 FSIP2Q5CZC0 6907 aa7.14□□□□□ -1.27
SMARCC2-202ENST00000347471 MT1BP07438 61 aa7.12□□□□□ -1.27
SMARCC2-202ENST00000347471 KRTAP19-8Q3LI54 63 aa7.07□□□□□ -1.28
SMARCC2-202ENST00000347471 LCE2AQ5TA79 106 aaPredicted RBP7.06□□□□□ -1.28
SMARCC2-202ENST00000347471 PP632Q6XCG6 107 aa7.03□□□□□ -1.28
SMARCC2-202ENST00000347471 LCE2BO14633 110 aa7.02□□□□□ -1.29
SMARCC2-202ENST00000347471 MT1XP80297 61 aa6.98□□□□□ -1.29
SMARCC2-202ENST00000347471 LCE3AQ5TA76 89 aa6.97□□□□□ -1.29
SMARCC2-202ENST00000347471 KRTAP10-5P60370 271 aa6.96□□□□□ -1.3
SMARCC2-202ENST00000347471 PRO2289Q9P1D8 64 aa6.91□□□□□ -1.3
SMARCC2-202ENST00000347471 KRTAP10-7P60409 375 aaPredicted RBP6.86□□□□□ -1.31
SMARCC2-202ENST00000347471 KRTAP15-1Q3LI76 137 aa6.85□□□□□ -1.31
SMARCC2-202ENST00000347471 NDUFAF8A1L188 74 aa6.84□□□□□ -1.31
SMARCC2-202ENST00000347471 KRTAP10-12P60413 245 aa6.84□□□□□ -1.31
SMARCC2-202ENST00000347471 KMT2DO14686 5537 aa6.82□□□□□ -1.32
SMARCC2-202ENST00000347471 LUZP6Q538Z0 58 aa6.67□□□□□ -1.34
SMARCC2-202ENST00000347471 KRTAP23-1A1A580 65 aa6.66□□□□□ -1.34
SMARCC2-202ENST00000347471 KRTAP4-8A0A0G2JLE6 195 aa6.65□□□□□ -1.34
SMARCC2-202ENST00000347471 KRTAP4-8Q9BYQ9 185 aa6.65□□□□□ -1.34
SMARCC2-202ENST00000347471 KRTAP12-3P60328 96 aa6.64□□□□□ -1.35
SMARCC2-202ENST00000347471 SSPOA2VEC9 5147 aa6.61□□□□□ -1.35
SMARCC2-202ENST00000347471 KRTAP8-1Q8IUC2 63 aa6.57□□□□□ -1.36
SMARCC2-202ENST00000347471 H3BS24 57 aa6.56□□□□□ -1.36
SMARCC2-202ENST00000347471 KRTAP19-5Q3LI72 72 aa6.51□□□□□ -1.37
SMARCC2-202ENST00000347471 KRTAP19-6Q3LI70 58 aa6.29□□□□□ -1.4
SMARCC2-202ENST00000347471 FCGBPQ9Y6R7 5405 aaPredicted RBP6.27□□□□□ -1.41
SMARCC2-202ENST00000347471 KRTAP4-7Q9BYR0 210 aa6.2□□□□□ -1.42
SMARCC2-202ENST00000347471 SPRR5A0A1B0GTR4 108 aa6.2□□□□□ -1.42
SMARCC2-202ENST00000347471 KRTAP19-7Q3SYF9 63 aa6.2□□□□□ -1.42
SMARCC2-202ENST00000347471 MUC12Q9UKN1 5478 aa6.18□□□□□ -1.42
SMARCC2-202ENST00000347471 LCE2DQ5TA82 110 aaPredicted RBP6.15□□□□□ -1.43
SMARCC2-202ENST00000347471 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
SMARCC2-202ENST00000347471 KRTAP9-2Q9BYQ4 174 aa6.11□□□□□ -1.43
SMARCC2-202ENST00000347471 MACF1Q9UPN3 7388 aaKnown RBP6.09□□□□□ -1.43
SMARCC2-202ENST00000347471 MT1EP04732 61 aa6.07□□□□□ -1.44
SMARCC2-202ENST00000347471 DSTQ03001 7570 aaKnown RBP6.07□□□□□ -1.44
SMARCC2-202ENST00000347471 SPRR2FQ96RM1 72 aa6.03□□□□□ -1.44
SMARCC2-202ENST00000347471 MT1LQ93083 61 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms