RNA–Protein interactions for RNA: ENST00000347458.9

STAU1-202, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene STAU1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-202ENST00000347458 C9orf92A6NGG3 77 aa5.79□□□□□ -1.48
STAU1-202ENST00000347458 SMR3BP02814 79 aaPredicted RBP5.79□□□□□ -1.48
STAU1-202ENST00000347458 KRTAP10-6P60371 365 aaPredicted RBP5.77□□□□□ -1.49
STAU1-202ENST00000347458 A0A0A0MQY5 61 aa5.75□□□□□ -1.49
STAU1-202ENST00000347458 FAT1Q14517 4588 aa5.75□□□□□ -1.49
STAU1-202ENST00000347458 PKD1P98161 4303 aa5.72□□□□□ -1.49
STAU1-202ENST00000347458 KMT2CQ8NEZ4 4911 aaKnown RBP5.71□□□□□ -1.5
STAU1-202ENST00000347458 SACSQ9NZJ4 4579 aa5.69□□□□□ -1.5
STAU1-202ENST00000347458 S4R3F8 94 aa5.66□□□□□ -1.5
STAU1-202ENST00000347458 KRTAP12-2P59991 146 aa5.66□□□□□ -1.5
STAU1-202ENST00000347458 DYNC1H1Q14204 4646 aaKnown RBP5.63□□□□□ -1.51
STAU1-202ENST00000347458 LCE2BO14633 110 aa5.63□□□□□ -1.51
STAU1-202ENST00000347458 RPS29P62273 56 aaKnown RBP5.63□□□□□ -1.51
STAU1-202ENST00000347458 XP32Q5T750 250 aa5.57□□□□□ -1.52
STAU1-202ENST00000347458 KRTAP12-1P59990 96 aa5.55□□□□□ -1.52
STAU1-202ENST00000347458 LRP1Q07954 4544 aaKnown RBP5.55□□□□□ -1.52
STAU1-202ENST00000347458 APOBP04114 4563 aaKnown RBP5.53□□□□□ -1.52
STAU1-202ENST00000347458 LUZP6Q538Z0 58 aa5.52□□□□□ -1.53
STAU1-202ENST00000347458 PKHD1L1Q86WI1 4243 aa5.51□□□□□ -1.53
STAU1-202ENST00000347458 MYCBP2O75592 4640 aa5.51□□□□□ -1.53
STAU1-202ENST00000347458 RYR2Q92736 4967 aa5.5□□□□□ -1.53
STAU1-202ENST00000347458 RYR3Q15413 4870 aa5.5□□□□□ -1.53
STAU1-202ENST00000347458 KRTAP10-8P60410 259 aa5.48□□□□□ -1.53
STAU1-202ENST00000347458 KIAA1109Q2LD37 5005 aa5.44□□□□□ -1.54
STAU1-202ENST00000347458 KRTAP17-1Q9BYP8 105 aa5.41□□□□□ -1.54
STAU1-202ENST00000347458 PLAC4Q8WY50 150 aa5.4□□□□□ -1.54
STAU1-202ENST00000347458 HSPG2P98160 4391 aa5.4□□□□□ -1.54
STAU1-202ENST00000347458 A0A1B0GVY2 172 aa5.4□□□□□ -1.55
STAU1-202ENST00000347458 FAT3Q8TDW7 4589 aa5.39□□□□□ -1.55
STAU1-202ENST00000347458 LCE2CQ5TA81 110 aa5.37□□□□□ -1.55
STAU1-202ENST00000347458 SEC61BP60468 96 aaKnown RBP5.36□□□□□ -1.55
STAU1-202ENST00000347458 EPPK1P58107 5090 aaKnown RBP5.35□□□□□ -1.55
STAU1-202ENST00000347458 KRTAP10-4P60372 401 aaPredicted RBP5.34□□□□□ -1.55
STAU1-202ENST00000347458 M0QZ58 72 aa5.32□□□□□ -1.56
STAU1-202ENST00000347458 RYR1P21817 5038 aa5.3□□□□□ -1.56
STAU1-202ENST00000347458 Q5VSD8 79 aa5.28□□□□□ -1.56
STAU1-202ENST00000347458 TNXBP22105 4242 aa5.27□□□□□ -1.57
STAU1-202ENST00000347458 LPAP08519 4548 aa5.25□□□□□ -1.57
STAU1-202ENST00000347458 ABCA13Q86UQ4 5058 aa5.22□□□□□ -1.57
STAU1-202ENST00000347458 KRTAP4-5Q9BYR2 181 aa5.19□□□□□ -1.58
STAU1-202ENST00000347458 LRP2P98164 4655 aa5.18□□□□□ -1.58
STAU1-202ENST00000347458 LCE2AQ5TA79 106 aaPredicted RBP5.16□□□□□ -1.58
STAU1-202ENST00000347458 R4GN34 69 aa5.14□□□□□ -1.59
STAU1-202ENST00000347458 LORP23490 312 aaPredicted RBP5.08□□□□□ -1.6
STAU1-202ENST00000347458 MUC2Q02817 5179 aa5.08□□□□□ -1.6
STAU1-202ENST00000347458 MT1HL1P0DM35 61 aa5.06□□□□□ -1.6
STAU1-202ENST00000347458 PP632Q6XCG6 107 aa5.05□□□□□ -1.6
STAU1-202ENST00000347458 HERC2O95714 4834 aa4.99□□□□□ -1.61
STAU1-202ENST00000347458 CAMK2N1Q7Z7J9 78 aa4.94□□□□□ -1.62
STAU1-202ENST00000347458 SPRR5A0A1B0GTR4 108 aa4.94□□□□□ -1.62
STAU1-202ENST00000347458 HERC1Q15751 4861 aa4.91□□□□□ -1.62
STAU1-202ENST00000347458 BIRC6Q9NR09 4857 aa4.88□□□□□ -1.63
STAU1-202ENST00000347458 PCLOQ9Y6V0 5065 aa4.84□□□□□ -1.63
STAU1-202ENST00000347458 PRO2289Q9P1D8 64 aa4.83□□□□□ -1.64
STAU1-202ENST00000347458 RNF213Q63HN8 5207 aa4.82□□□□□ -1.64
STAU1-202ENST00000347458 KRTAP4-1Q9BYQ7 146 aa4.82□□□□□ -1.64
STAU1-202ENST00000347458 FAT4Q6V0I7 4981 aa4.79□□□□□ -1.64
STAU1-202ENST00000347458 TNP1P09430 55 aa4.79□□□□□ -1.64
STAU1-202ENST00000347458 MUC17Q685J3 4493 aa4.77□□□□□ -1.65
STAU1-202ENST00000347458 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
STAU1-202ENST00000347458 UBR4Q5T4S7 5183 aa4.7□□□□□ -1.66
STAU1-202ENST00000347458 INE1O15225 51 aa4.65□□□□□ -1.66
STAU1-202ENST00000347458 KRTAP19-2Q3LHN2 52 aa4.63□□□□□ -1.67
STAU1-202ENST00000347458 HMCN2Q8NDA2 5059 aa4.59□□□□□ -1.67
STAU1-202ENST00000347458 LCE3AQ5TA76 89 aa4.54□□□□□ -1.68
STAU1-202ENST00000347458 FLGP20930 4061 aaPredicted RBP4.5□□□□□ -1.69
STAU1-202ENST00000347458 M0R2T5 61 aa4.44□□□□□ -1.7
STAU1-202ENST00000347458 KRTAP8-1Q8IUC2 63 aa4.37□□□□□ -1.71
STAU1-202ENST00000347458 KRTAP19-1Q8IUB9 90 aa4.35□□□□□ -1.71
STAU1-202ENST00000347458 SPRR2GQ9BYE4 73 aa4.35□□□□□ -1.71
STAU1-202ENST00000347458 KRTAP10-12P60413 245 aa4.31□□□□□ -1.72
STAU1-202ENST00000347458 USH2AO75445 5202 aa4.3□□□□□ -1.72
STAU1-202ENST00000347458 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
STAU1-202ENST00000347458 MT1HP80294 61 aa4.26□□□□□ -1.73
STAU1-202ENST00000347458 KRTAP10-10P60014 251 aa4.25□□□□□ -1.73
STAU1-202ENST00000347458 MT1FP04733 61 aa4.21□□□□□ -1.74
STAU1-202ENST00000347458 FSIP2Q5CZC0 6907 aa4.17□□□□□ -1.74
STAU1-202ENST00000347458 MT2AP02795 61 aa4.17□□□□□ -1.74
STAU1-202ENST00000347458 KRTAP10-5P60370 271 aa4.16□□□□□ -1.74
STAU1-202ENST00000347458 MT1XP80297 61 aa4.14□□□□□ -1.75
STAU1-202ENST00000347458 KMT2DO14686 5537 aa4.13□□□□□ -1.75
STAU1-202ENST00000347458 KRTAP9-8Q9BYQ0 159 aa4.13□□□□□ -1.75
STAU1-202ENST00000347458 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
STAU1-202ENST00000347458 KRTAP19-8Q3LI54 63 aa4.06□□□□□ -1.76
STAU1-202ENST00000347458 MT1BP07438 61 aa4.05□□□□□ -1.76
STAU1-202ENST00000347458 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
STAU1-202ENST00000347458 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
STAU1-202ENST00000347458 KRTAP19-5Q3LI72 72 aa3.98□□□□□ -1.77
STAU1-202ENST00000347458 LOC100996750A0A140TA64 210 aa3.98□□□□□ -1.77
STAU1-202ENST00000347458 KRTAP4-6Q9BYQ5 205 aa3.98□□□□□ -1.77
STAU1-202ENST00000347458 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
STAU1-202ENST00000347458 KRTAP2-3P0C7H8 128 aa3.96□□□□□ -1.78
STAU1-202ENST00000347458 KRTAP2-4Q9BYR9 128 aa3.96□□□□□ -1.78
STAU1-202ENST00000347458 KRTAP2-1Q9BYU5 128 aa3.96□□□□□ -1.78
STAU1-202ENST00000347458 KRTAP9-3Q9BYQ3 159 aa3.93□□□□□ -1.78
STAU1-202ENST00000347458 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.88□□□□□ -1.79
STAU1-202ENST00000347458 KRTAP9-2Q9BYQ4 174 aa3.84□□□□□ -1.79
STAU1-202ENST00000347458 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.8
STAU1-202ENST00000347458 KRTAP4-7Q9BYR0 210 aa3.84□□□□□ -1.8
STAU1-202ENST00000347458 KRTAP4-8A0A0G2JLE6 195 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 195.3 ms