RNA–Protein interactions for RNA: ENST00000347077.8

ZNF546-201, Transcript of zinc finger protein 546, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF546, Length 7,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-201ENST00000347077 KRTAP10-4P60372 401 aaPredicted RBP2.55□□□□□ -2
ZNF546-201ENST00000347077 PLECQ15149 4684 aaKnown RBP2.55□□□□□ -2
ZNF546-201ENST00000347077 DYNC1H1Q14204 4646 aaKnown RBP2.54□□□□□ -2
ZNF546-201ENST00000347077 ZFHX3Q15911 3703 aa2.54□□□□□ -2
ZNF546-201ENST00000347077 HMCN2Q8NDA2 5059 aa2.51□□□□□ -2.01
ZNF546-201ENST00000347077 ALMS1Q8TCU4 4167 aa2.51□□□□□ -2.01
ZNF546-201ENST00000347077 DNAH1Q9P2D7 4330 aa2.51□□□□□ -2.01
ZNF546-201ENST00000347077 HUWE1Q7Z6Z7 4374 aaKnown RBP2.5□□□□□ -2.01
ZNF546-201ENST00000347077 SMG1Q96Q15 3661 aaKnown RBP2.5□□□□□ -2.01
ZNF546-201ENST00000347077 SPENQ96T58 3664 aaKnown RBP2.49□□□□□ -2.01
ZNF546-201ENST00000347077 SPRR2GQ9BYE4 73 aa2.48□□□□□ -2.01
ZNF546-201ENST00000347077 SVEP1Q4LDE5 3571 aa2.48□□□□□ -2.01
ZNF546-201ENST00000347077 LCE3AQ5TA76 89 aa2.47□□□□□ -2.01
ZNF546-201ENST00000347077 KRTAP8-1Q8IUC2 63 aa2.46□□□□□ -2.02
ZNF546-201ENST00000347077 LRP1BQ9NZR2 4599 aa2.46□□□□□ -2.02
ZNF546-201ENST00000347077 USH2AO75445 5202 aa2.45□□□□□ -2.02
ZNF546-201ENST00000347077 TRRAPQ9Y4A5 3859 aa2.45□□□□□ -2.02
ZNF546-201ENST00000347077 FAT4Q6V0I7 4981 aa2.44□□□□□ -2.02
ZNF546-201ENST00000347077 DNAH11Q96DT5 4516 aa2.44□□□□□ -2.02
ZNF546-201ENST00000347077 CUBNO60494 3623 aa2.43□□□□□ -2.02
ZNF546-201ENST00000347077 AKAP9Q99996 3911 aa2.43□□□□□ -2.02
ZNF546-201ENST00000347077 KRTAP4-5Q9BYR2 181 aa2.42□□□□□ -2.02
ZNF546-201ENST00000347077 RNF213Q63HN8 5207 aa2.42□□□□□ -2.02
ZNF546-201ENST00000347077 FAT2Q9NYQ8 4349 aa2.38□□□□□ -2.03
ZNF546-201ENST00000347077 KRTAP10-7P60409 375 aaPredicted RBP2.38□□□□□ -2.03
ZNF546-201ENST00000347077 DNAH10Q8IVF4 4471 aa2.37□□□□□ -2.03
ZNF546-201ENST00000347077 SACSQ9NZJ4 4579 aa2.37□□□□□ -2.03
ZNF546-201ENST00000347077 KRTAP10-5P60370 271 aa2.37□□□□□ -2.03
ZNF546-201ENST00000347077 LORP23490 312 aaPredicted RBP2.35□□□□□ -2.03
ZNF546-201ENST00000347077 CSMD2Q7Z408 3487 aa2.35□□□□□ -2.03
ZNF546-201ENST00000347077 DNAH5Q8TE73 4624 aa2.34□□□□□ -2.04
ZNF546-201ENST00000347077 LCE3CQ5T5A8 94 aa2.34□□□□□ -2.04
ZNF546-201ENST00000347077 DNAH9Q9NYC9 4486 aa2.34□□□□□ -2.04
ZNF546-201ENST00000347077 ZNF469Q96JG9 3925 aaPredicted RBP2.33□□□□□ -2.04
ZNF546-201ENST00000347077 MUC3AQ02505 3323 aa2.32□□□□□ -2.04
ZNF546-201ENST00000347077 VPS13CQ709C8 3753 aa2.31□□□□□ -2.04
ZNF546-201ENST00000347077 DNAH3Q8TD57 4116 aa2.31□□□□□ -2.04
ZNF546-201ENST00000347077 CMYA5Q8N3K9 4069 aa2.31□□□□□ -2.04
ZNF546-201ENST00000347077 BSNQ9UPA5 3926 aa2.31□□□□□ -2.04
ZNF546-201ENST00000347077 CRCT1Q9UGL9 99 aa2.31□□□□□ -2.04
ZNF546-201ENST00000347077 DNAH7Q8WXX0 4024 aa2.3□□□□□ -2.04
ZNF546-201ENST00000347077 DNAH17Q9UFH2 4485 aa2.3□□□□□ -2.04
ZNF546-201ENST00000347077 FAT1Q14517 4588 aa2.3□□□□□ -2.04
ZNF546-201ENST00000347077 KRTAP19-8Q3LI54 63 aa2.29□□□□□ -2.04
ZNF546-201ENST00000347077 DNAH6Q9C0G6 4158 aa2.28□□□□□ -2.04
ZNF546-201ENST00000347077 FAT3Q8TDW7 4589 aa2.27□□□□□ -2.05
ZNF546-201ENST00000347077 MT1HP80294 61 aa2.27□□□□□ -2.05
ZNF546-201ENST00000347077 DNAH2Q9P225 4427 aa2.26□□□□□ -2.05
ZNF546-201ENST00000347077 MT2AP02795 61 aa2.26□□□□□ -2.05
ZNF546-201ENST00000347077 APOBP04114 4563 aaKnown RBP2.23□□□□□ -2.05
ZNF546-201ENST00000347077 VPS13DQ5THJ4 4388 aa2.22□□□□□ -2.05
ZNF546-201ENST00000347077 SPRR5A0A1B0GTR4 108 aa2.22□□□□□ -2.05
ZNF546-201ENST00000347077 SSPOA2VEC9 5147 aa2.22□□□□□ -2.05
ZNF546-201ENST00000347077 HSPG2P98160 4391 aa2.21□□□□□ -2.06
ZNF546-201ENST00000347077 DYNC2H1Q8NCM8 4307 aaKnown RBP2.21□□□□□ -2.06
ZNF546-201ENST00000347077 CSMD3Q7Z407 3707 aa2.21□□□□□ -2.06
ZNF546-201ENST00000347077 DNAH8Q96JB1 4490 aa2.21□□□□□ -2.06
ZNF546-201ENST00000347077 FRAS1Q86XX4 4008 aa2.21□□□□□ -2.06
ZNF546-201ENST00000347077 STARD9Q9P2P6 4700 aa2.21□□□□□ -2.06
ZNF546-201ENST00000347077 KRTAP19-5Q3LI72 72 aa2.2□□□□□ -2.06
ZNF546-201ENST00000347077 KRTAP12-4P60329 112 aa2.2□□□□□ -2.06
ZNF546-201ENST00000347077 MYCBP2O75592 4640 aa2.2□□□□□ -2.06
ZNF546-201ENST00000347077 VPS13BQ7Z7G8 4022 aa2.19□□□□□ -2.06
ZNF546-201ENST00000347077 MT3P25713 68 aa2.18□□□□□ -2.06
ZNF546-201ENST00000347077 HECTD4Q9Y4D8 3996 aa2.18□□□□□ -2.06
ZNF546-201ENST00000347077 ANK2Q01484 3957 aa2.18□□□□□ -2.06
ZNF546-201ENST00000347077 SPRR2FQ96RM1 72 aa2.17□□□□□ -2.06
ZNF546-201ENST00000347077 MT1GP13640 62 aa2.17□□□□□ -2.06
ZNF546-201ENST00000347077 KRTAP4-1Q9BYQ7 146 aa2.17□□□□□ -2.06
ZNF546-201ENST00000347077 LRP1Q07954 4544 aaKnown RBP2.16□□□□□ -2.06
ZNF546-201ENST00000347077 MT1FP04733 61 aa2.16□□□□□ -2.06
ZNF546-201ENST00000347077 MUC2Q02817 5179 aa2.11□□□□□ -2.07
ZNF546-201ENST00000347077 KRTAP19-1Q8IUB9 90 aa2.1□□□□□ -2.07
ZNF546-201ENST00000347077 MT1LQ93083 61 aa2.1□□□□□ -2.07
ZNF546-201ENST00000347077 LCE2BO14633 110 aa2.09□□□□□ -2.07
ZNF546-201ENST00000347077 LYSTQ99698 3801 aa2.09□□□□□ -2.07
ZNF546-201ENST00000347077 KMT2AQ03164 3969 aa2.09□□□□□ -2.07
ZNF546-201ENST00000347077 PRKDCP78527 4128 aaKnown RBP2.08□□□□□ -2.08
ZNF546-201ENST00000347077 FLGP20930 4061 aaPredicted RBP2.08□□□□□ -2.08
ZNF546-201ENST00000347077 LCE3EQ5T5B0 92 aa2.08□□□□□ -2.08
ZNF546-201ENST00000347077 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
ZNF546-201ENST00000347077 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
ZNF546-201ENST00000347077 MT1XP80297 61 aa2.06□□□□□ -2.08
ZNF546-201ENST00000347077 SPRR2EP22531 72 aa2.05□□□□□ -2.08
ZNF546-201ENST00000347077 SPRR2BP35325 72 aa2.05□□□□□ -2.08
ZNF546-201ENST00000347077 SPRR2AP35326 72 aa2.05□□□□□ -2.08
ZNF546-201ENST00000347077 MUC17Q685J3 4493 aa2.05□□□□□ -2.08
ZNF546-201ENST00000347077 MDN1Q9NU22 5596 aa2.03□□□□□ -2.08
ZNF546-201ENST00000347077 SPRR2DP22532 72 aa2.02□□□□□ -2.09
ZNF546-201ENST00000347077 MT1EP04732 61 aa2.01□□□□□ -2.09
ZNF546-201ENST00000347077 KRTAP19-3Q7Z4W3 81 aa2□□□□□ -2.09
ZNF546-201ENST00000347077 MT1BP07438 61 aa1.99□□□□□ -2.09
ZNF546-201ENST00000347077 KRTAP9-8Q9BYQ0 159 aa1.99□□□□□ -2.09
ZNF546-201ENST00000347077 LCE3BQ5TA77 95 aa1.97□□□□□ -2.09
ZNF546-201ENST00000347077 PKHD1L1Q86WI1 4243 aa1.97□□□□□ -2.09
ZNF546-201ENST00000347077 KRTAP9-3Q9BYQ3 159 aa1.96□□□□□ -2.1
ZNF546-201ENST00000347077 PKD1P98161 4303 aa1.95□□□□□ -2.1
ZNF546-201ENST00000347077 LCE2CQ5TA81 110 aa1.95□□□□□ -2.1
ZNF546-201ENST00000347077 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
ZNF546-201ENST00000347077 LRP2P98164 4655 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms