RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 C1orf64Q8NEQ6 169 aa10.27□□□□□ -0.76
SMARCB1-202ENST00000344921 V9GYY9 64 aa10.24□□□□□ -0.77
SMARCB1-202ENST00000344921 H0Y9P7 68 aa10.23□□□□□ -0.77
SMARCB1-202ENST00000344921 H1FX-AS1Q4G0G2 97 aa10.22□□□□□ -0.77
SMARCB1-202ENST00000344921 LOC101927531A0A1B0GV80 90 aa10.21□□□□□ -0.77
SMARCB1-202ENST00000344921 BRK1Q8WUW1 75 aa10.21□□□□□ -0.78
SMARCB1-202ENST00000344921 LINC00208Q96KT6 92 aa10.16□□□□□ -0.78
SMARCB1-202ENST00000344921 KRTAP9-2Q9BYQ4 174 aa10.14□□□□□ -0.79
SMARCB1-202ENST00000344921 KRTAP9-8Q9BYQ0 159 aa10.07□□□□□ -0.8
SMARCB1-202ENST00000344921 KRTAP3-1Q9BYR8 98 aa10.07□□□□□ -0.8
SMARCB1-202ENST00000344921 LCE2DQ5TA82 110 aaPredicted RBP10.04□□□□□ -0.8
SMARCB1-202ENST00000344921 S4R3F8 94 aa9.99□□□□□ -0.81
SMARCB1-202ENST00000344921 MT2AP02795 61 aa9.98□□□□□ -0.81
SMARCB1-202ENST00000344921 PSPHP1O15172 72 aa9.96□□□□□ -0.81
SMARCB1-202ENST00000344921 KRTAP10-10P60014 251 aa9.93□□□□□ -0.82
SMARCB1-202ENST00000344921 Q5VV11 94 aa9.93□□□□□ -0.82
SMARCB1-202ENST00000344921 A8MUN3 132 aa9.93□□□□□ -0.82
SMARCB1-202ENST00000344921 LCA10Q71F78 164 aa9.91□□□□□ -0.82
SMARCB1-202ENST00000344921 COA5Q86WW8 74 aa9.91□□□□□ -0.82
SMARCB1-202ENST00000344921 MT1FP04733 61 aa9.9□□□□□ -0.82
SMARCB1-202ENST00000344921 CSAG1Q6PB30 78 aa9.86□□□□□ -0.83
SMARCB1-202ENST00000344921 CHKB-CPT1BH3BT56 60 aa9.82□□□□□ -0.84
SMARCB1-202ENST00000344921 PRR15LQ9BU68 103 aa9.82□□□□□ -0.84
SMARCB1-202ENST00000344921 PMAIP1Q13794 54 aa9.81□□□□□ -0.84
SMARCB1-202ENST00000344921 LINC01558Q9Y6Z2 57 aa9.81□□□□□ -0.84
SMARCB1-202ENST00000344921 KRTAP3-3Q9BYR6 98 aa9.76□□□□□ -0.85
SMARCB1-202ENST00000344921 KRTAP9-3Q9BYQ3 159 aa9.73□□□□□ -0.85
SMARCB1-202ENST00000344921 CDC42SE1Q9NRR8 79 aa9.7□□□□□ -0.86
SMARCB1-202ENST00000344921 A6NED7 52 aa9.7□□□□□ -0.86
SMARCB1-202ENST00000344921 FSIP2Q5CZC0 6907 aa9.69□□□□□ -0.86
SMARCB1-202ENST00000344921 DMAC1Q96GE9 116 aa9.68□□□□□ -0.86
SMARCB1-202ENST00000344921 KRTAP9-6A0A140TA67 174 aa9.67□□□□□ -0.86
SMARCB1-202ENST00000344921 CRCT1Q9UGL9 99 aa9.66□□□□□ -0.86
SMARCB1-202ENST00000344921 ACYP2P14621 99 aa9.64□□□□□ -0.87
SMARCB1-202ENST00000344921 LCE2BO14633 110 aa9.62□□□□□ -0.87
SMARCB1-202ENST00000344921 SEC61GP60059 68 aa9.62□□□□□ -0.87
SMARCB1-202ENST00000344921 KTN1-AS1Q86SY8 53 aa9.59□□□□□ -0.87
SMARCB1-202ENST00000344921 A8MU10 97 aa9.58□□□□□ -0.88
SMARCB1-202ENST00000344921 A6NN06 94 aa9.54□□□□□ -0.88
SMARCB1-202ENST00000344921 SPTSSBQ8NFR3 76 aa9.54□□□□□ -0.88
SMARCB1-202ENST00000344921 USH2AO75445 5202 aa9.51□□□□□ -0.89
SMARCB1-202ENST00000344921 H0YAA0 97 aa9.48□□□□□ -0.89
SMARCB1-202ENST00000344921 ADM2Q7Z4H4 148 aa9.45□□□□□ -0.9
SMARCB1-202ENST00000344921 KRTAP19-1Q8IUB9 90 aa9.41□□□□□ -0.9
SMARCB1-202ENST00000344921 CRIPTQ9P021 101 aa9.38□□□□□ -0.91
SMARCB1-202ENST00000344921 A0A1B0GU69 56 aa9.36□□□□□ -0.91
SMARCB1-202ENST00000344921 SPRR2GQ9BYE4 73 aa9.36□□□□□ -0.91
SMARCB1-202ENST00000344921 SSPOA2VEC9 5147 aa9.35□□□□□ -0.91
SMARCB1-202ENST00000344921 SPATA8Q6RVD6 105 aa9.31□□□□□ -0.92
SMARCB1-202ENST00000344921 UQCR11O14957 56 aa9.27□□□□□ -0.93
SMARCB1-202ENST00000344921 P0C880 135 aa9.25□□□□□ -0.93
SMARCB1-202ENST00000344921 KRTAP19-8Q3LI54 63 aa9.22□□□□□ -0.93
SMARCB1-202ENST00000344921 MIR22HGQ0VDD5 57 aa9.2□□□□□ -0.94
SMARCB1-202ENST00000344921 KRTAP19-6Q3LI70 58 aa9.2□□□□□ -0.94
SMARCB1-202ENST00000344921 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
SMARCB1-202ENST00000344921 R4GN34 69 aa9.19□□□□□ -0.94
SMARCB1-202ENST00000344921 MT1BP07438 61 aa9.18□□□□□ -0.94
SMARCB1-202ENST00000344921 M0QZ58 72 aa9.13□□□□□ -0.95
SMARCB1-202ENST00000344921 FCGBPQ9Y6R7 5405 aaPredicted RBP9.09□□□□□ -0.95
SMARCB1-202ENST00000344921 LINC01554Q52M75 96 aa9.01□□□□□ -0.97
SMARCB1-202ENST00000344921 PLAC4Q8WY50 150 aa8.97□□□□□ -0.97
SMARCB1-202ENST00000344921 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.96□□□□□ -0.98
SMARCB1-202ENST00000344921 PRAC1Q96KF2 57 aa8.91□□□□□ -0.98
SMARCB1-202ENST00000344921 KRTAP10-5P60370 271 aa8.9□□□□□ -0.98
SMARCB1-202ENST00000344921 A0A1B0GU33 70 aa8.82□□□□□ -1
SMARCB1-202ENST00000344921 KRTAP13-4Q3LI77 160 aa8.78□□□□□ -1
SMARCB1-202ENST00000344921 PRO2289Q9P1D8 64 aa8.78□□□□□ -1
SMARCB1-202ENST00000344921 MACF1Q9UPN3 7388 aaKnown RBP8.76□□□□□ -1.01
SMARCB1-202ENST00000344921 KRTAP9-7A8MTY7 169 aa8.74□□□□□ -1.01
SMARCB1-202ENST00000344921 MT1XP80297 61 aa8.71□□□□□ -1.02
SMARCB1-202ENST00000344921 K7ERS5 55 aa8.68□□□□□ -1.02
SMARCB1-202ENST00000344921 A0A0D9SG42 100 aa8.63□□□□□ -1.03
SMARCB1-202ENST00000344921 KRTAP25-1Q3LHN0 102 aa8.6□□□□□ -1.03
SMARCB1-202ENST00000344921 SYNE2Q8WXH0 6885 aaKnown RBP8.58□□□□□ -1.04
SMARCB1-202ENST00000344921 CAMK2N1Q7Z7J9 78 aa8.53□□□□□ -1.04
SMARCB1-202ENST00000344921 KRTAP6-3Q3LI67 103 aa8.49□□□□□ -1.05
SMARCB1-202ENST00000344921 SPINT4Q6UDR6 99 aa8.49□□□□□ -1.05
SMARCB1-202ENST00000344921 ROMO1P60602 79 aa8.43□□□□□ -1.06
SMARCB1-202ENST00000344921 KRTAP12-2P59991 146 aa8.41□□□□□ -1.06
SMARCB1-202ENST00000344921 KRTAP12-1P59990 96 aa8.4□□□□□ -1.06
SMARCB1-202ENST00000344921 KRTAP10-7P60409 375 aaPredicted RBP8.34□□□□□ -1.07
SMARCB1-202ENST00000344921 KMT2DO14686 5537 aa8.32□□□□□ -1.08
SMARCB1-202ENST00000344921 KRTAP10-12P60413 245 aa8.27□□□□□ -1.09
SMARCB1-202ENST00000344921 KRTAP8-1Q8IUC2 63 aa8.26□□□□□ -1.09
SMARCB1-202ENST00000344921 KRTAP5-9P26371 169 aa8.25□□□□□ -1.09
SMARCB1-202ENST00000344921 KRTAP4-8A0A0G2JLE6 195 aa8.24□□□□□ -1.09
SMARCB1-202ENST00000344921 KRTAP4-8Q9BYQ9 185 aa8.24□□□□□ -1.09
SMARCB1-202ENST00000344921 SPRR2FQ96RM1 72 aa8.17□□□□□ -1.1
SMARCB1-202ENST00000344921 MUC12Q9UKN1 5478 aa8.14□□□□□ -1.11
SMARCB1-202ENST00000344921 H3BS24 57 aa8.09□□□□□ -1.11
SMARCB1-202ENST00000344921 C10orf95Q9H7T3 257 aa8□□□□□ -1.13
SMARCB1-202ENST00000344921 MDN1Q9NU22 5596 aa7.95□□□□□ -1.14
SMARCB1-202ENST00000344921 SPRR2EP22531 72 aa7.95□□□□□ -1.14
SMARCB1-202ENST00000344921 SPRR2BP35325 72 aa7.95□□□□□ -1.14
SMARCB1-202ENST00000344921 SPRR2AP35326 72 aa7.95□□□□□ -1.14
SMARCB1-202ENST00000344921 TNP1P09430 55 aa7.95□□□□□ -1.14
SMARCB1-202ENST00000344921 NEBP20929 6669 aa7.93□□□□□ -1.14
SMARCB1-202ENST00000344921 LCE1AQ5T7P2 110 aa7.86□□□□□ -1.15
SMARCB1-202ENST00000344921 KRTAP15-1Q3LI76 137 aa7.84□□□□□ -1.15
SMARCB1-202ENST00000344921 KRTAP19-7Q3SYF9 63 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms