RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 SNURFQ9Y675 71 aa7.06□□□□□ -1.28
TPM4-202ENST00000344824 H3BPC8 53 aa7.04□□□□□ -1.28
TPM4-202ENST00000344824 CYP4F30PQ9H0H9 118 aa7.04□□□□□ -1.28
TPM4-202ENST00000344824 FAM236DA0A1B0GTK5 79 aa7.03□□□□□ -1.28
TPM4-202ENST00000344824 FAM236CP0DP71 79 aa7.03□□□□□ -1.28
TPM4-202ENST00000344824 KRTAP10-6P60371 365 aaPredicted RBP7.01□□□□□ -1.29
TPM4-202ENST00000344824 CCDC179H3BU77 68 aa7□□□□□ -1.29
TPM4-202ENST00000344824 KLKP1Q107X0 134 aa7□□□□□ -1.29
TPM4-202ENST00000344824 HRES1P13985 223 aa6.98□□□□□ -1.29
TPM4-202ENST00000344824 KRTAP19-4Q3LI73 84 aa6.98□□□□□ -1.29
TPM4-202ENST00000344824 RBM12B-AS1Q9P1G2 102 aa6.97□□□□□ -1.29
TPM4-202ENST00000344824 KRTAP4-9Q9BYQ8 210 aa6.96□□□□□ -1.3
TPM4-202ENST00000344824 C4orf26Q17RF5 130 aa6.95□□□□□ -1.3
TPM4-202ENST00000344824 CYSTM1Q9H1C7 97 aa6.93□□□□□ -1.3
TPM4-202ENST00000344824 PCP4P48539 62 aa6.91□□□□□ -1.3
TPM4-202ENST00000344824 KRTAP9-7A8MTY7 169 aa6.89□□□□□ -1.31
TPM4-202ENST00000344824 MPLKIPQ8TAP9 179 aa6.89□□□□□ -1.31
TPM4-202ENST00000344824 H7BZZ5 65 aa6.85□□□□□ -1.31
TPM4-202ENST00000344824 NDUFC1O43677 76 aa6.85□□□□□ -1.31
TPM4-202ENST00000344824 FSIP2Q5CZC0 6907 aa6.84□□□□□ -1.31
TPM4-202ENST00000344824 KRTAP3-1Q9BYR8 98 aa6.82□□□□□ -1.32
TPM4-202ENST00000344824 KRTAP4-2Q9BYR5 136 aa6.79□□□□□ -1.32
TPM4-202ENST00000344824 SPANXA2-OT1Q8N9U9 137 aa6.78□□□□□ -1.32
TPM4-202ENST00000344824 H1FX-AS1Q4G0G2 97 aa6.77□□□□□ -1.33
TPM4-202ENST00000344824 DMAC1Q96GE9 116 aa6.76□□□□□ -1.33
TPM4-202ENST00000344824 A8MUN3 132 aa6.75□□□□□ -1.33
TPM4-202ENST00000344824 CRCT1Q9UGL9 99 aa6.75□□□□□ -1.33
TPM4-202ENST00000344824 KRTAP9-8Q9BYQ0 159 aa6.74□□□□□ -1.33
TPM4-202ENST00000344824 KRTAP4-11Q9BYQ6 195 aa6.72□□□□□ -1.33
TPM4-202ENST00000344824 ACYP2P14621 99 aa6.71□□□□□ -1.34
TPM4-202ENST00000344824 TMEM258P61165 79 aa6.71□□□□□ -1.34
TPM4-202ENST00000344824 MT2AP02795 61 aa6.7□□□□□ -1.34
TPM4-202ENST00000344824 S4R3F8 94 aa6.7□□□□□ -1.34
TPM4-202ENST00000344824 ATP5EP56381 51 aaPredicted RBP6.67□□□□□ -1.34
TPM4-202ENST00000344824 LCE5AQ5TCM9 118 aa6.67□□□□□ -1.34
TPM4-202ENST00000344824 MT1FP04733 61 aa6.66□□□□□ -1.34
TPM4-202ENST00000344824 KRTAP10-10P60014 251 aa6.66□□□□□ -1.34
TPM4-202ENST00000344824 LCA10Q71F78 164 aa6.66□□□□□ -1.34
TPM4-202ENST00000344824 USH2AO75445 5202 aa6.65□□□□□ -1.35
TPM4-202ENST00000344824 CHKB-CPT1BH3BT56 60 aa6.64□□□□□ -1.35
TPM4-202ENST00000344824 COA5Q86WW8 74 aa6.63□□□□□ -1.35
TPM4-202ENST00000344824 KRTAP9-3Q9BYQ3 159 aa6.63□□□□□ -1.35
TPM4-202ENST00000344824 SSPOA2VEC9 5147 aa6.58□□□□□ -1.36
TPM4-202ENST00000344824 CSAG1Q6PB30 78 aa6.55□□□□□ -1.36
TPM4-202ENST00000344824 SPTSSBQ8NFR3 76 aa6.51□□□□□ -1.37
TPM4-202ENST00000344824 SERP1Q9Y6X1 66 aa6.5□□□□□ -1.37
TPM4-202ENST00000344824 ADM2Q7Z4H4 148 aa6.38□□□□□ -1.39
TPM4-202ENST00000344824 FCGBPQ9Y6R7 5405 aaPredicted RBP6.37□□□□□ -1.39
TPM4-202ENST00000344824 RPS28P62857 69 aaKnown RBP6.33□□□□□ -1.4
TPM4-202ENST00000344824 H0YAA0 97 aa6.33□□□□□ -1.4
TPM4-202ENST00000344824 SEC61GP60059 68 aa6.31□□□□□ -1.4
TPM4-202ENST00000344824 SMIM26A0A096LP01 95 aa6.3□□□□□ -1.4
TPM4-202ENST00000344824 P0C880 135 aa6.3□□□□□ -1.4
TPM4-202ENST00000344824 A0A1B0GU69 56 aa6.28□□□□□ -1.4
TPM4-202ENST00000344824 LINC01558Q9Y6Z2 57 aa6.27□□□□□ -1.41
TPM4-202ENST00000344824 KRTAP19-6Q3LI70 58 aa6.24□□□□□ -1.41
TPM4-202ENST00000344824 PRR15LQ9BU68 103 aa6.23□□□□□ -1.41
TPM4-202ENST00000344824 V9GYY9 64 aa6.22□□□□□ -1.41
TPM4-202ENST00000344824 Q1T7F1 81 aa6.21□□□□□ -1.42
TPM4-202ENST00000344824 PSPHP1O15172 72 aa6.18□□□□□ -1.42
TPM4-202ENST00000344824 M0QZ58 72 aa6.16□□□□□ -1.42
TPM4-202ENST00000344824 Q5VV11 94 aa6.16□□□□□ -1.42
TPM4-202ENST00000344824 R4GN34 69 aa6.16□□□□□ -1.42
TPM4-202ENST00000344824 A0A1B0GU33 70 aa6.15□□□□□ -1.43
TPM4-202ENST00000344824 SPRR2GQ9BYE4 73 aa6.15□□□□□ -1.43
TPM4-202ENST00000344824 CRIPTQ9P021 101 aa6.14□□□□□ -1.43
TPM4-202ENST00000344824 MT1BP07438 61 aa6.11□□□□□ -1.43
TPM4-202ENST00000344824 MACF1Q9UPN3 7388 aaKnown RBP6.11□□□□□ -1.43
TPM4-202ENST00000344824 KRTAP13-4Q3LI77 160 aa6.1□□□□□ -1.43
TPM4-202ENST00000344824 SYNE2Q8WXH0 6885 aaKnown RBP6.1□□□□□ -1.43
TPM4-202ENST00000344824 KRTAP19-8Q3LI54 63 aa6.09□□□□□ -1.43
TPM4-202ENST00000344824 LINC01554Q52M75 96 aa6.08□□□□□ -1.44
TPM4-202ENST00000344824 SPATA8Q6RVD6 105 aa6.08□□□□□ -1.44
TPM4-202ENST00000344824 A6NN06 94 aa6.07□□□□□ -1.44
TPM4-202ENST00000344824 A0A0D9SG42 100 aa6.02□□□□□ -1.45
TPM4-202ENST00000344824 UQCR11O14957 56 aa6.02□□□□□ -1.45
TPM4-202ENST00000344824 A6NED7 52 aa5.99□□□□□ -1.45
TPM4-202ENST00000344824 KRTAP5-3Q6L8H2 238 aa5.99□□□□□ -1.45
TPM4-202ENST00000344824 A8MU10 97 aa5.98□□□□□ -1.45
TPM4-202ENST00000344824 MIR22HGQ0VDD5 57 aa5.96□□□□□ -1.46
TPM4-202ENST00000344824 KRTAP10-5P60370 271 aa5.95□□□□□ -1.46
TPM4-202ENST00000344824 SPINT4Q6UDR6 99 aa5.89□□□□□ -1.47
TPM4-202ENST00000344824 PLAC4Q8WY50 150 aa5.88□□□□□ -1.47
TPM4-202ENST00000344824 KRTAP6-3Q3LI67 103 aa5.87□□□□□ -1.47
TPM4-202ENST00000344824 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
TPM4-202ENST00000344824 KRTAP12-2P59991 146 aa5.82□□□□□ -1.48
TPM4-202ENST00000344824 CDC42SE1Q9NRR8 79 aa5.82□□□□□ -1.48
TPM4-202ENST00000344824 PRO2289Q9P1D8 64 aa5.8□□□□□ -1.48
TPM4-202ENST00000344824 MUC12Q9UKN1 5478 aa5.77□□□□□ -1.49
TPM4-202ENST00000344824 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
TPM4-202ENST00000344824 BRK1Q8WUW1 75 aa5.76□□□□□ -1.49
TPM4-202ENST00000344824 MT1XP80297 61 aa5.75□□□□□ -1.49
TPM4-202ENST00000344824 K7ERS5 55 aa5.73□□□□□ -1.49
TPM4-202ENST00000344824 KMT2DO14686 5537 aa5.72□□□□□ -1.49
TPM4-202ENST00000344824 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
TPM4-202ENST00000344824 NEBP20929 6669 aa5.68□□□□□ -1.5
TPM4-202ENST00000344824 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
TPM4-202ENST00000344824 MDN1Q9NU22 5596 aa5.63□□□□□ -1.51
TPM4-202ENST00000344824 KRTAP5-9P26371 169 aa5.62□□□□□ -1.51
TPM4-202ENST00000344824 KRTAP8-1Q8IUC2 63 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms