RNA–Protein interactions for RNA: ENST00000344785.10

RBM38-202, Transcript of RNA binding motif protein 38, humanhuman

TSL 5

Gene RBM38, Length 2,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-202ENST00000344785 COX6B2Q6YFQ2 88 aa9.6□□□□□ -0.87
RBM38-202ENST00000344785 CDC42SE1Q9NRR8 79 aa9.56□□□□□ -0.88
RBM38-202ENST00000344785 PMAIP1Q13794 54 aa9.54□□□□□ -0.88
RBM38-202ENST00000344785 SPTSSBQ8NFR3 76 aa9.5□□□□□ -0.89
RBM38-202ENST00000344785 TPRXLQ17RH7 258 aa9.49□□□□□ -0.89
RBM38-202ENST00000344785 KRTAP3-3Q9BYR6 98 aa9.41□□□□□ -0.9
RBM38-202ENST00000344785 A6NN06 94 aa9.39□□□□□ -0.91
RBM38-202ENST00000344785 SPATA8Q6RVD6 105 aa9.39□□□□□ -0.91
RBM38-202ENST00000344785 UQCR11O14957 56 aa9.38□□□□□ -0.91
RBM38-202ENST00000344785 PCLOQ9Y6V0 5065 aa9.37□□□□□ -0.91
RBM38-202ENST00000344785 MIR22HGQ0VDD5 57 aa9.35□□□□□ -0.91
RBM38-202ENST00000344785 KTN1-AS1Q86SY8 53 aa9.31□□□□□ -0.92
RBM38-202ENST00000344785 J3QL48 77 aa9.29□□□□□ -0.92
RBM38-202ENST00000344785 S4R3F8 94 aa9.26□□□□□ -0.93
RBM38-202ENST00000344785 MUC17Q685J3 4493 aa9.25□□□□□ -0.93
RBM38-202ENST00000344785 H0YAA0 97 aa9.25□□□□□ -0.93
RBM38-202ENST00000344785 A0A1B0GU33 70 aa9.23□□□□□ -0.93
RBM38-202ENST00000344785 H1FX-AS1Q4G0G2 97 aa9.23□□□□□ -0.93
RBM38-202ENST00000344785 HERC1Q15751 4861 aa9.2□□□□□ -0.94
RBM38-202ENST00000344785 KRTAP10-6P60371 365 aaPredicted RBP9.19□□□□□ -0.94
RBM38-202ENST00000344785 KRTAP4-1Q9BYQ7 146 aa9.18□□□□□ -0.94
RBM38-202ENST00000344785 KRTAP3-2Q9BYR7 98 aa9.18□□□□□ -0.94
RBM38-202ENST00000344785 RBM12B-AS1Q9P1G2 102 aa9.13□□□□□ -0.95
RBM38-202ENST00000344785 MUC2Q02817 5179 aa9.1□□□□□ -0.95
RBM38-202ENST00000344785 SEC61BP60468 96 aaKnown RBP9.1□□□□□ -0.95
RBM38-202ENST00000344785 P0C880 135 aa9.07□□□□□ -0.96
RBM38-202ENST00000344785 KRTAP13-4Q3LI77 160 aa9.06□□□□□ -0.96
RBM38-202ENST00000344785 HMCN2Q8NDA2 5059 aa9.05□□□□□ -0.96
RBM38-202ENST00000344785 CSAG1Q6PB30 78 aa8.98□□□□□ -0.97
RBM38-202ENST00000344785 ADM2Q7Z4H4 148 aa8.98□□□□□ -0.97
RBM38-202ENST00000344785 KRTAP19-2Q3LHN2 52 aa8.96□□□□□ -0.97
RBM38-202ENST00000344785 PRAC1Q96KF2 57 aa8.94□□□□□ -0.98
RBM38-202ENST00000344785 A0A0D9SG42 100 aa8.88□□□□□ -0.99
RBM38-202ENST00000344785 FLGP20930 4061 aaPredicted RBP8.82□□□□□ -1
RBM38-202ENST00000344785 LORP23490 312 aaPredicted RBP8.71□□□□□ -1.02
RBM38-202ENST00000344785 KRTAP12-2P59991 146 aa8.7□□□□□ -1.02
RBM38-202ENST00000344785 UBR4Q5T4S7 5183 aa8.7□□□□□ -1.02
RBM38-202ENST00000344785 K7ERS5 55 aa8.69□□□□□ -1.02
RBM38-202ENST00000344785 FAT4Q6V0I7 4981 aa8.69□□□□□ -1.02
RBM38-202ENST00000344785 RNF213Q63HN8 5207 aa8.66□□□□□ -1.02
RBM38-202ENST00000344785 M0QZ58 72 aa8.66□□□□□ -1.02
RBM38-202ENST00000344785 KRTAP12-1P59990 96 aa8.65□□□□□ -1.03
RBM38-202ENST00000344785 LINC01554Q52M75 96 aa8.63□□□□□ -1.03
RBM38-202ENST00000344785 SPINT4Q6UDR6 99 aa8.58□□□□□ -1.04
RBM38-202ENST00000344785 LCE2CQ5TA81 110 aa8.58□□□□□ -1.04
RBM38-202ENST00000344785 R4GN34 69 aa8.56□□□□□ -1.04
RBM38-202ENST00000344785 CRIPTQ9P021 101 aa8.55□□□□□ -1.04
RBM38-202ENST00000344785 ROMO1P60602 79 aa8.54□□□□□ -1.04
RBM38-202ENST00000344785 H3BS24 57 aa8.53□□□□□ -1.04
RBM38-202ENST00000344785 KRTAP25-1Q3LHN0 102 aa8.46□□□□□ -1.05
RBM38-202ENST00000344785 MT1HP80294 61 aa8.32□□□□□ -1.08
RBM38-202ENST00000344785 C10orf95Q9H7T3 257 aa8.31□□□□□ -1.08
RBM38-202ENST00000344785 M0R2T5 61 aa8.22□□□□□ -1.09
RBM38-202ENST00000344785 KRTAP19-1Q8IUB9 90 aa8.11□□□□□ -1.11
RBM38-202ENST00000344785 MT1FP04733 61 aa8.1□□□□□ -1.11
RBM38-202ENST00000344785 KRTAP9-8Q9BYQ0 159 aa8.1□□□□□ -1.11
RBM38-202ENST00000344785 MT2AP02795 61 aa8.1□□□□□ -1.11
RBM38-202ENST00000344785 SPRR2GQ9BYE4 73 aa8.07□□□□□ -1.12
RBM38-202ENST00000344785 CAMK2N1Q7Z7J9 78 aa8.06□□□□□ -1.12
RBM38-202ENST00000344785 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
RBM38-202ENST00000344785 PLAC4Q8WY50 150 aa7.83□□□□□ -1.16
RBM38-202ENST00000344785 KRTAP19-8Q3LI54 63 aa7.78□□□□□ -1.16
RBM38-202ENST00000344785 KRTAP9-3Q9BYQ3 159 aa7.77□□□□□ -1.17
RBM38-202ENST00000344785 LCE2AQ5TA79 106 aaPredicted RBP7.76□□□□□ -1.17
RBM38-202ENST00000344785 MT1BP07438 61 aa7.75□□□□□ -1.17
RBM38-202ENST00000344785 KRTAP15-1Q3LI76 137 aa7.71□□□□□ -1.17
RBM38-202ENST00000344785 TNP1P09430 55 aa7.71□□□□□ -1.18
RBM38-202ENST00000344785 PP632Q6XCG6 107 aa7.63□□□□□ -1.19
RBM38-202ENST00000344785 KRTAP10-5P60370 271 aa7.6□□□□□ -1.19
RBM38-202ENST00000344785 MT1XP80297 61 aa7.59□□□□□ -1.19
RBM38-202ENST00000344785 LCE2BO14633 110 aa7.55□□□□□ -1.2
RBM38-202ENST00000344785 USH2AO75445 5202 aa7.54□□□□□ -1.2
RBM38-202ENST00000344785 KRTAP23-1A1A580 65 aa7.51□□□□□ -1.21
RBM38-202ENST00000344785 A0A0A0MQY5 61 aa7.46□□□□□ -1.22
RBM38-202ENST00000344785 NDUFAF8A1L188 74 aa7.46□□□□□ -1.22
RBM38-202ENST00000344785 LCE3AQ5TA76 89 aa7.45□□□□□ -1.22
RBM38-202ENST00000344785 KRTAP10-7P60409 375 aaPredicted RBP7.36□□□□□ -1.23
RBM38-202ENST00000344785 KRTAP10-12P60413 245 aa7.25□□□□□ -1.25
RBM38-202ENST00000344785 KRTAP8-1Q8IUC2 63 aa7.24□□□□□ -1.25
RBM38-202ENST00000344785 PRO2289Q9P1D8 64 aa7.23□□□□□ -1.25
RBM38-202ENST00000344785 KMT2DO14686 5537 aa7.21□□□□□ -1.26
RBM38-202ENST00000344785 SSPOA2VEC9 5147 aa7.13□□□□□ -1.27
RBM38-202ENST00000344785 LCE2DQ5TA82 110 aaPredicted RBP7.11□□□□□ -1.27
RBM38-202ENST00000344785 KRTAP12-3P60328 96 aa7.08□□□□□ -1.28
RBM38-202ENST00000344785 FSIP2Q5CZC0 6907 aa7.08□□□□□ -1.28
RBM38-202ENST00000344785 SPRR5A0A1B0GTR4 108 aa7.08□□□□□ -1.28
RBM38-202ENST00000344785 KRTAP9-2Q9BYQ4 174 aa7.06□□□□□ -1.28
RBM38-202ENST00000344785 KRTAP4-8A0A0G2JLE6 195 aa7.02□□□□□ -1.29
RBM38-202ENST00000344785 KRTAP4-8Q9BYQ9 185 aa7.02□□□□□ -1.29
RBM38-202ENST00000344785 LUZP6Q538Z0 58 aa7□□□□□ -1.29
RBM38-202ENST00000344785 KRTAP19-5Q3LI72 72 aa6.96□□□□□ -1.29
RBM38-202ENST00000344785 KRTAP19-6Q3LI70 58 aa6.84□□□□□ -1.31
RBM38-202ENST00000344785 KRTAP19-7Q3SYF9 63 aa6.78□□□□□ -1.32
RBM38-202ENST00000344785 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
RBM38-202ENST00000344785 FCGBPQ9Y6R7 5405 aaPredicted RBP6.71□□□□□ -1.33
RBM38-202ENST00000344785 LCE3CQ5T5A8 94 aa6.65□□□□□ -1.35
RBM38-202ENST00000344785 KRTAP9-6A0A140TA67 174 aa6.61□□□□□ -1.35
RBM38-202ENST00000344785 MT1EP04732 61 aa6.59□□□□□ -1.35
RBM38-202ENST00000344785 KRTAP4-7Q9BYR0 210 aa6.57□□□□□ -1.36
RBM38-202ENST00000344785 MT1LQ93083 61 aa6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms